BAC Information

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BAC

Clone NameB6Ng01-204O05
ChromosomeX (Build37)
Map Location 16,409,264 - 16,410,206
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043949, LOC100043950, Cypt6, LOC100038939, LOC668993, Maoa, Maob
Downstream geneNdph, LOC100043063, Efhc2, Fundc1, EG278181, EG668994
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204O05.bB6Ng01-204O05.g
ACCGA024710GA024711
length949763
definitionB6Ng01-204O05.b B6Ng01-204O05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccccagacgcaattctcttcaacaggtgaatattatttattag
gagctcaaatgccatctggaaaatttgcacatttggcatcattcttacca
aacaccgtttgcctgtttcacttttacttaaagacatcatctcatcattc
tgaagaacacttgcaacttccaaccaatactcacaagctaggaagaatta
atatccttggtaaagataagcaatatagttttcatgcaataatcatcatg
tgtatttccttcttcaaacaattgatttttcctatgacgaagttaaataa
tttttataaaacttatccaatggagattgaagagatggctcagcagtcaa
gaactctgactgttcttccagaggtcctgagttcaattcccagcaactac
atggtagatcacaaccatctgtaatggtatctgataccctcagatacata
aaataaataaattaatattttaaaatattaaaaatgtatgttatgacagt
ttgttgagtgaaattagctatagagttaaaatataaataagattaatttt
catattgatacagcgttagatgccagagaaagagagagagagagagagag
agagagagagagagagagagagagagagagaatgttttttgccgtgctac
agattgaactgagggccccctgtattctaggcaagcgttctaacactgag
ttataatttcaaccaaaatattctgaatgttctgctttatagggatcact
gaaacaaatattagatgaaactgtgcaattaatgcttacattaaaaaatt
taagctcccaaatgaaagttgaaatttttcagaagtctaaatgatggagt
tatcagtctaaagagattttcagtaaaaatataattttttactcaagatg
gtgttaagaggccaccagatacagatttccctttcatggaccaccacat

gaattctttgtttagctctgaaccccatttttaatggggttaattgaatt
tctggagtccagcttcttgagctctttgtatatattggctattagtcccc
tatcagatttaggattggtaaaaatccttttccaatctgttggtggcctt
tttgtcttattgactgtgtcttttgccttacagaagctttgcaattttat
gaggtcccatttgtcaattcttgatcttaatgcacaagccattgggtgga
tacttcattcctccttagaatgggggacaaaatacccatgaaaggagtta
cagagacaaagtttggagctaagacgaaatgatggattatccagagacta
ccccacctgggggtccaacccataatcagccaccaaacccatacactatt
gcatatgccagaatgattatgctgaagggaccctgctatagctgtctcgt
ataaggctatgccagtgcctgccaaatatagaagtggatgctcacagtca
tctataagatggaacacagtgtccccaatggagaagctagagaaagtacc
caaggagctgaaggggtctgcaaccctatatgtggaacaacaatatgaac
taaccagtacacccagagcttgtatctctacctccatatgtagcagaaga
tggcctagtcggccatcactgggaagagaggccccttggcattgcaaact
ttatatgccccagtacaggggaacaccagagccaagatgcagtagtgggt
gggtaggggagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_16409264_16410206
seq2: B6Ng01-204O05.b_48_996

seq1  GAATTCTCCCCAGACGCAATTCTCTTCAACAGGTGAATATTATTTATTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCCAGACGCAATTCTCTTCAACAGGTGAATATTATTTATTAG  50

seq1  GAGCTCAAATGCCATCTGGAAAATTTGCACATTTGGCATCATTCTTACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCAAATGCCATCTGGAAAATTTGCACATTTGGCATCATTCTTACCA  100

seq1  AACACCGTTTGCCTGTTTCACTTTTACTTAAAGACATCATCTCATCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCGTTTGCCTGTTTCACTTTTACTTAAAGACATCATCTCATCATTC  150

seq1  TGAAGAACACTTGCAACTTCCAACCAATACTCACAAGCTAGGAAGAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAACACTTGCAACTTCCAACCAATACTCACAAGCTAGGAAGAATTA  200

seq1  ATATCCTTGGTAAAGATAAGCAATATAGTTTTCATGCAATAATCATCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTTGGTAAAGATAAGCAATATAGTTTTCATGCAATAATCATCATG  250

seq1  TGTATTTCCTTCTTCAAACAATTGATTTTTCCTATGACGAAGTTAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCCTTCTTCAAACAATTGATTTTTCCTATGACGAAGTTAAATAA  300

seq1  TTTTTATAAAACTTATCCAATGGAGATTGAAGAGATGGCTCAGCAGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAAAACTTATCCAATGGAGATTGAAGAGATGGCTCAGCAGTCAA  350

seq1  GAACTCTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACTAC  400

seq1  ATGGTAGATCACAACCATCTGTAATGGTATCTGATACCCTCAGATACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGATCACAACCATCTGTAATGGTATCTGATACCCTCAGATACATA  450

seq1  AAATAAATAAATTAATATTTTAAAATATTAAAAATGTATGTTATGACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATTAATATTTTAAAATATTAAAAATGTATGTTATGACAGT  500

seq1  TTGTTGAGTGAAATTAGCTATAGAGTTAAAATATAAATAAGATTAATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAGTGAAATTAGCTATAGAGTTAAAATATAAATAAGATTAATTTT  550

seq1  CATATTGATACAGCGTTAGATGCCAGAGAAAGAGAGAGAGAGAGAGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGATACAGCGTTAGATGCCAGAGAAAGAGAGAGAGAGAGAGAGAG  600

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGTTTTTTGCCGTGCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGTTTTTTGCCGTGCTAC  650

seq1  AGATTGAACTGAGGGCCCCCTGTATTCTAGGCAAGCGTTCTAACACTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGAACTGAGGGCCCCCTGTATTCTAGGCAAGCGTTCTAACACTGAG  700

seq1  TTATAATTTCAACCAAAATATTCTGAATGTTCTGCTTTATAGGAATCACT  750
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTATAATTTCAACCAAAATATTCTGAATGTTCTGCTTTATAGGGATCACT  750

seq1  G-AACAAATATTAGATGAAACTGTGCAATTAATGCTTACATTAAAAAATT  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAATATTAGATGAAACTGTGCAATTAATGCTTACATTAAAAAATT  800

seq1  TAAGCT-CCAAATGAAAGTTGAAA-TTTTCAGAAGTCTAAATGAT-GAG-  845
      |||||| ||||||||||||||||| |||||||||||||||||||| ||| 
seq2  TAAGCTCCCAAATGAAAGTTGAAATTTTTCAGAAGTCTAAATGATGGAGT  850

seq1  TATCAGTCAAAAGAGATTTTCAGT-AAAATATAATTTTTTACTCAAGATG  894
      |||||||| ||||||||||||||| |||||||||||||||||||||||||
seq2  TATCAGTCTAAAGAGATTTTCAGTAAAAATATAATTTTTTACTCAAGATG  900

seq1  GTGTTAAGTGGTCATCAGATACAGATTTCCACTTTCAGGGA-CACCACAT  943
      |||||||| || || ||||||||||||||| |||||| ||| ||||||||
seq2  GTGTTAAGAGGCCACCAGATACAGATTTCC-CTTTCATGGACCACCACAT  949


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