BAC Information

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BAC

Clone NameB6Ng01-206H22
ChromosomeX (Build37)
Map Location 120,154,953 - 120,200,179
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039544, Nap1l3
Downstream gene3110007F17Rik, LOC100039751, LOC100039763, LOC665281, EG625591, LOC665325, EG382265, LOC665364, EG546368
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206H22.bB6Ng01-206H22.g
ACCGA025895GA025896
length364926
definitionB6Ng01-206H22.b B6Ng01-206H22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,154,953 - 120,155,316)(120,199,258 - 120,200,179)
sequence
caggacagccagggaaacacagagaaacccaatctccaaaaactcaaaaa
accaagaaaacaaaaccaaacaaacaaacacacagtttttgggtcagttt
tgcattcttgtatatttttaatttttttagaattttagtgtttttcttaa
gggtcttaagaagagtgttctggaggttttttttttttttttttttggtt
tttcagtatttttgtgtatttttagtgttttttctggtttgtttgttttt
tttttaatattagggatttttagggttttggggtatttttaaggctttat
aggtttttttagattttttgtttttgtttttgtttttgtgagtgtgtgta
tgtgtgtgtgtgtg

gaattcagaaaaaaaaaatgtacaagaaatgaaaaatgtcgctaaaattc
ttgtttttgttgttgttattgttttgttttggtttggattagttttcgtt
tttttcgagacggagtttgtctgtgtagaccggtttgtcctacaactcac
tttgtagaccaggctggcctcgaactcagaaatccacctgcctctgcctc
ccaagtgctaggattaaaggtgtgcgacaccacacaaggctgctaaagtt
attaaatgctaaaacactctaaaacactcttctaaacacccttcaaaccc
ttaataaaaacattaaatttctaaaaacactaaataaactggctggcaac
actaaaactcttaaactcaaaatatacaactctaaaattaaaaagaaaaa
ctcaaaaacacagacacacacacacacaaaaagtaaataaaacagtaaaa
agctaaaaaaaaatcccttaaacctaggaagaacgaaaaatcactaaaac
accctaaatcctttttaaaatatagaaaaaaaaattaaacatacactaaa
accctgaaaacaaaaaaaatattaaaacactgttctaaaaactctaaaaa
cggttttaaaaataccctaatattataaaaaatacacaataaaccaaaaa
tatccataaagtactttctttctttccttctttctttctttctttctttc
tttctttctttctttctttctttcttctgtttttgtttttgtttttgttt
ttgtttttcctgacagggtttctctgtgtatccctacctgtcttggagca
catactgtagaccagaatggccccgaactaagaaatctactacctctgcc
tcccaagtgctgggattaaaggcaagggccagccacttacctggcatctc
taaaactctttaaacttccaaaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_120154953_120155316
seq2: B6Ng01-206H22.b_53_416

seq1  CAGGACAGCCAGGGAAACACAGAGAAACCCAATCTCCAAAAACTCAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGCCAGGGAAACACAGAGAAACCCAATCTCCAAAAACTCAAAAA  50

seq1  ACCAAGAAAACAAAACCAAACAAACAAACACACAGTTTTTGGGTCAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAAAACAAAACCAAACAAACAAACACACAGTTTTTGGGTCAGTTT  100

seq1  TGCATTCTTGTATATTTTTAATTTTTTTAGAATTTTAGTGTTTTTCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTTGTATATTTTTAATTTTTTTAGAATTTTAGTGTTTTTCTTAA  150

seq1  GGGTCTTAAGAAGAGTGTTCTGGAGGTTTTTTTTTTTTTTTTTTTTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTAAGAAGAGTGTTCTGGAGGTTTTTTTTTTTTTTTTTTTTGGTT  200

seq1  TTTCAGTATTTTTGTGTATTTTTAGTGTTTTTTCTGGTTTGTTTGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTATTTTTGTGTATTTTTAGTGTTTTTTCTGGTTTGTTTGTTTTT  250

seq1  TTTTTAATATTAGGGATTTTTAGGGTTTTGGGGTATTTTTAAGGCTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATATTAGGGATTTTTAGGGTTTTGGGGTATTTTTAAGGCTTTAT  300

seq1  AGGTTTTTTTAGATTTTTTGTTTTTGTTTTTGTTTTTGTGAGTGTGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTTTTAGATTTTTTGTTTTTGTTTTTGTTTTTGTGAGTGTGTGTA  350

seq1  TGTGTGTGTGTGTG  364
      ||||||||||||||
seq2  TGTGTGTGTGTGTG  364


seq1: chrX_120199258_120200179
seq2: B6Ng01-206H22.g_69_994 (reverse)

seq1  TATTTTTGG-AGTTT-AAGAGTTTTAGGGTTGCCAGG-CAGTGG-TGGCC  46
      ||||||||| ||||| ||||||||||| | |||||||  ||||| |||||
seq2  TATTTTTGGAAGTTTAAAGAGTTTTAGAGATGCCAGGTAAGTGGCTGGCC  50

seq1  CTTGCCTTTAATCCCAGCACTTGGGAGGCAGAGGTAGTAGATTTCTTAGT  96
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTTTAATCCCAGCACTTGGGAGGCAGAGGTAGTAGATTTCTTAGT  100

seq1  TCGGGGCCATTCTGGTCTACAGTATGTGCTCCAAGACAGGTAGGGATACA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGCCATTCTGGTCTACAGTATGTGCTCCAAGACAGGTAGGGATACA  150

seq1  CAGAGAAACCCTGTCAGGAAAAACAAAAACAAAAACAAAAACAAAAACAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACCCTGTCAGGAAAAACAAAAACAAAAACAAAAACAAAAACAG  200

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAG  250

seq1  GAAAGAAAGAAAGTACTTTATGGATATTTTTGGTTTATTGTGTATTTTTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGTACTTTATGGATATTTTTGGTTTATTGTGTATTTTTT  300

seq1  ATAATATTAGGGTATTTTTAAAACCGTTTTTAGAGTTTTTAGAACAGTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTAGGGTATTTTTAAAACCGTTTTTAGAGTTTTTAGAACAGTGT  350

seq1  TTTAATATTTTTTTTGTTTTCAGGGTTTTAGTGTATGTTTAATTTTTTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATTTTTTTTGTTTTCAGGGTTTTAGTGTATGTTTAATTTTTTTT  400

seq1  TCTATATTTTAAAAAGGATTTAGGGTGTTTTAGTGATTTTTCGTTCTTCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATTTTAAAAAGGATTTAGGGTGTTTTAGTGATTTTTCGTTCTTCC  450

seq1  TAGGTTTAAGGGATTTTTTTTTAGCTTTTTACTGTTTTATTTACTTTTTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTAAGGGATTTTTTTTTAGCTTTTTACTGTTTTATTTACTTTTTG  500

seq1  TGTGTGTGTGTGTCTGTGTTTTTGAGTTTTTCTTTTTAATTTTAGAGTTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTCTGTGTTTTTGAGTTTTTCTTTTTAATTTTAGAGTTG  550

seq1  TATATTTTGAGTTTAAGAGTTTTAGTGTTGCCAGCCAGTTTATTTAGTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTGAGTTTAAGAGTTTTAGTGTTGCCAGCCAGTTTATTTAGTGT  600

seq1  TTTTAGAAATTTAATGTTTTTATTAAGGGTTTGAAGGGTGTTTAGAAGAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAAATTTAATGTTTTTATTAAGGGTTTGAAGGGTGTTTAGAAGAG  650

seq1  TGTTTTAGAGTGTTTTAGCATTTAATAACTTTAGCAGCCTTGTGTGGTGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAGAGTGTTTTAGCATTTAATAACTTTAGCAGCCTTGTGTGGTGT  700

seq1  CGCACACCTTTAATCCTAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACACCTTTAATCCTAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTG  750

seq1  AGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTGTAGGACAAACCGGTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTGTAGGACAAACCGGTCT  800

seq1  ACACAGACAAACTCCGTCTCGAAAAAAACGAAAACTAATCCAAACCAAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACAAACTCCGTCTCGAAAAAAACGAAAACTAATCCAAACCAAAA  850

seq1  CAAAACAATAACAACAACAAAAACAAGAATTTTAGCGACATTTTTCATTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAATAACAACAACAAAAACAAGAATTTTAGCGACATTTTTCATTT  900

seq1  CTTGTACATTTTTTTTTTCTGAATTC  922
      ||||||||||||||||||||||||||
seq2  CTTGTACATTTTTTTTTTCTGAATTC  926


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