BAC Information

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BAC

Clone NameB6Ng01-206J12
ChromosomeX (Build37)
Map Location 128,772,784 - 128,774,008
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670449, LOC245600, EG631264
Downstream geneLOC665846, LOC665850, LOC665854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206J12.bB6Ng01-206J12.g
ACCGA025969GA025970
length1,212468
definitionB6Ng01-206J12.b B6Ng01-206J12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgtatatctgcaagtgtttatgtgtgaattgtgaatgtgtat
gtgttaacacataatcctttgagtccagaggctcacaaattatctccata
attacaataaatttatttagaaaatattcttaagggacttgctattttgt
ttgctggttaatgatttttttcagctgagatttgtctcatgcattaattg
ttcttagggcaatttctaacttccattacttcctgtgtttagagcttttc
ctataagtagttaaccacacccaaattcatgtcactactaactgataatc
aaaatttggagggcatacagaagcttttacttcctaaaggactaacacat
ctaattttctctactctgtatgacaatgaccaatgtaaaattttctcatt
caatctattatgacctcctctaattcagtaatctgagatatacaaataaa
aataataagtgataatctgacagataaaatatgctttaggtaatgaagaa
cattaaaatatatgaattttatacagcaagatatggatgtataagtaaca
acaggcaaacagctcattgatcctgtctttagtttctcttcttttgtcct
caaaataatttcactgatggtttccagtgagttttctactggaaaaaaaa
tgcaaaatgttcatgttatttatcactatagtcagaatgggatataaaga
gggtttttttgtaattatattttctccacctccaaatttagttcttaaca
ctccatgaagattaaaacacatttcaacttaaaaaaataatgtgtaaatg
acaccagcttccatgcttcacaggtgctggaaagatcatgaatgtaagaa
tggccatccctttcagtggtataaaaataaccaacatagataacttgtaa
tacaatgaaaataaaaagggaacagaaatttcaatgtaaataataataat
aaacatagctgcttctgccacacactgtcagcagaagcagattgtatagc
accataattatcagagttgacacatgtaaatgattataattaataagttt
tcagatttaagtcatatgttatagatctcattaagtaatacataatagca
ggtaccaaggacttccacatgtaaattattgaataatctataaaactact
ccacatgtcctattgggaaatgattttcataagattaagagagtagaatt
aactcacctaag

tttgttcagttctgagccccattttttaagggggttatttgattttctga
ggtccaccttcttgagttctttatatatgttggatattagtcccctatct
gatttaggataggtaaagatcctttcccagtctgttggtggtctttttgt
cttatagacagtgtcttttgccttgcagcctagcaaacacagaagtggat
gctcacagtcagctaatggatggatcacagggctcccaatggaggagcta
gagaaagtacccaaggagctaaagggatctgcaaccctataggtggaaca
acattatgaactaaccagtacccctgagctcttgactctagctgcatatg
tatcaaaagatggcctagtcggccatcactggaaagagaggcccattgga
cacgcagactttgtgtgccccggtacaggggaacgccagggccaaagggg
gggagtgggtgggtaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_128772784_128774008
seq2: B6Ng01-206J12.b_50_1261 (reverse)

seq1  CTTAGGTGAGTAAATTCATCT---TTAATCTTATGAAAAATCATCTCCCA  47
      ||||||||||| |||||  ||   ||||||||||| |||||||| |||||
seq2  CTTAGGTGAGTTAATTCTACTCTCTTAATCTTATG-AAAATCATTTCCCA  49

seq1  ATTTATGACATGTGAAGTATACCTTTTTATAGATTAACTCCATAATTTTA  97
      |  || |||||||| ||||     ||||||||||| | || |||| ||||
seq2  A--TAGGACATGTGGAGTA----GTTTTATAGATT-ATTCAATAA-TTTA  91

seq1  CATTGTTTGAATGTCCTTTGTTCCCTGCTATTATGTATTTACCTAATGGA  147
      ||   | || | |||| ||| | |||||||||||||| |||| |||| ||
seq2  CA---TGTGGAAGTCC-TTGGTACCTGCTATTATGTA-TTACTTAAT-GA  135

seq1  GATCTATAACATATGACTTAAATCTGAAAAC-TATTAATTTATAATCATT  196
      ||||||||||||||||||||||||||||||| |||||| ||||||||| |
seq2  GATCTATAACATATGACTTAAATCTGAAAACTTATTAA-TTATAATCA-T  183

seq1  TTACATGTGTCAACTCTGATAATTATGGTGCTATACAATCTGCTTCTGCT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGTGTCAACTCTGATAATTATGGTGCTATACAATCTGCTTCTGCT  233

seq1  GACAGTGTGTTGGCAGAAGCAGCTATGTTTATTATTATTATTTACATTGA  296
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGTG-TGGCAGAAGCAGCTATGTTTATTATTATTATTTACATTGA  282

seq1  AATTTCTGTT-CCTTTTTATTTTCATTGTATTACAAGTTATCTATGTTGG  345
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGTTCCCTTTTTATTTTCATTGTATTACAAGTTATCTATGTTGG  332

seq1  TTATTTTTATACCACTGAAAGGGATGGCCATTCTTACATTCATGATCTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTATACCACTGAAAGGGATGGCCATTCTTACATTCATGATCTTT  382

seq1  CCAGCACCTGTGAAGCATGGAAGCTGGTGTCATTTACACATTATTTTTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACCTGTGAAGCATGGAAGCTGGTGTCATTTACACATTATTTTTTT  432

seq1  AAGTTGAAATGTGTTTTAATCTTCATGGAGTGTTAAGAACTAAATTTGGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAAATGTGTTTTAATCTTCATGGAGTGTTAAGAACTAAATTTGGA  482

seq1  GGTGGAGAAAATATAATTACAAAAAAACCCTCTTTATATCCCATTCTGAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGAAAATATAATTACAAAAAAACCCTCTTTATATCCCATTCTGAC  532

seq1  TATAGTGATAAATAACATGAACATTTTGCATTTTTTTTCCAGTAGAAAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGATAAATAACATGAACATTTTGCATTTTTTTTCCAGTAGAAAAC  582

seq1  TCACTGGAAACCATCAGTGAAATTATTTTGAGGACAAAAGAAGAGAAACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGAAACCATCAGTGAAATTATTTTGAGGACAAAAGAAGAGAAACT  632

seq1  AAAGACAGGATCAATGAGCTGTTTGCCTGTTGTTACTTATACATCCATAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGGATCAATGAGCTGTTTGCCTGTTGTTACTTATACATCCATAT  682

seq1  CTTGCTGTATAAAATTCATATATTTTAATGTTCTTCATTACCTAAAGCAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGTATAAAATTCATATATTTTAATGTTCTTCATTACCTAAAGCAT  732

seq1  ATTTTATCTGTCAGATTATCACTTATTATTTTTATTTGTATATCTCAGAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATCTGTCAGATTATCACTTATTATTTTTATTTGTATATCTCAGAT  782

seq1  TACTGAATTAGAGGAGGTCATAATAGATTGAATGAGAAAATTTTACATTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAATTAGAGGAGGTCATAATAGATTGAATGAGAAAATTTTACATTG  832

seq1  GTCATTGTCATACAGAGTAGAGAAAATTAGATGTGTTAGTCCTTTAGGAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGTCATACAGAGTAGAGAAAATTAGATGTGTTAGTCCTTTAGGAA  882

seq1  GTAAAAGCTTCTGTATGCCCTCCAAATTTTGATTATCAGTTAGTAGTGAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGCTTCTGTATGCCCTCCAAATTTTGATTATCAGTTAGTAGTGAC  932

seq1  ATGAATTTGGGTGTGGTTAACTACTTATAGGAAAAGCTCTAAACACAGGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTGGGTGTGGTTAACTACTTATAGGAAAAGCTCTAAACACAGGA  982

seq1  AGTAATGGAAGTTAGAAATTGCCCTAAGAACAATTAATGCATGAGACAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGAAGTTAGAAATTGCCCTAAGAACAATTAATGCATGAGACAAA  1032

seq1  TCTCAGCTGAAAAAAATCATTAACCAGCAAACAAAATAGCAAGTCCCTTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTGAAAAAAATCATTAACCAGCAAACAAAATAGCAAGTCCCTTA  1082

seq1  AGAATATTTTCTAAATAAATTTATTGTAATTATGGAGATAATTTGTGAGC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTTTCTAAATAAATTTATTGTAATTATGGAGATAATTTGTGAGC  1132

seq1  CTCTGGACTCAAAGGATTATGTGTTAACACATACACATTCACAATTCACA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGACTCAAAGGATTATGTGTTAACACATACACATTCACAATTCACA  1182

seq1  CATAAACACTTGCAGATATACACAGAATTC  1225
      ||||||||||||||||||||||||||||||
seq2  CATAAACACTTGCAGATATACACAGAATTC  1212


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