BAC Information

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BAC

Clone NameB6Ng01-207B14
ChromosomeX (Build37)
Map Location 7,542,420 - 7,660,931
singlet/doubletdoublet
Overlap geneGata1, Glod5, LOC668975, EG627737, EG632013, Suv39h1, Was
Upstream geneCcnb3, Akap4, Clcn5, Usp27x, 2010204K13Rik, LOC668973, Ppp1r3f, 4930524L23Rik, Foxp3, Ccdc22, Cacna1f, Syp, LOC632264, Lmo6, Plp2, Pdzx, Ppia-psx_14.1, Gpkow, LOC100043938, Wdr45, Praf2, Ccdc120, EG236622, Tcfe3, Gripap1, LOC100043939, Kcnd1, Otud5, Pim2, Slc35a2, Pqbp1, Timm17b, Pcsk1n, Eras, Hdac6, LOC668974
Downstream geneEG627782, Wdr13, Rbm3, Tbc1d25, Ebp, Porcn, Ftsj1, Slc38a5, Ssxb10, Ssxb9, Ssxb1, Ssxb2, LOC546263, Ssxb6, Ssxb3, EG627853, EG627857, LOC668977, LOC631002, Ssx9, Ssxb5, LOC625480, EG436188, B630019K06Rik, LOC100009698, LOC436189, LOC673817, LOC331380, EG434726, LOC100043940, EG434727, LOC436190, LOC100042782, EG668980, Fthl17, LOC100043942, EG434728, LOC100043943, LOC385316, EG434729, LOC100043944, LOC628008
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207B14.bB6Ng01-207B14.g
ACCGA026341GA026342
length552785
definitionB6Ng01-207B14.b B6Ng01-207B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,660,374 - 7,660,931)(7,542,420 - 7,543,201)
sequence
attgtgtgatgatattctaacaaatgtcatttgacagtattctcattagc
ttcattctgaactggcagtattagcataaatgcaccaagaaacagtaata
aattacccaagtattgctgatgtttaaacctgccatatttagcaacaaag
gagttagaatgaatgttcagactaagaacatgtggttgttatgtgaggca
aggtctcctgcagcacaaactacatgatattgagcttcggagcttcgaga
ttccacctccccggggctgggatgacaggtgtgcaacaccactccaagtt
tctgtggtgctgggaaccgaacctaatgctatcctggaactcactctgta
gaccaggctgtcctcgaactcagaaatctgcctgcctctgcctcccaagt
gctgggattaaaggcgtgggccaccactgcccggactaatgcttcttaaa
ctgtctaaccactgagccacatccctaaccatgtgtactttgtactttct
tctctctctctctctctctctctctctctctctctctctccctctccctc
tc
gaattcttactattcttatatcctcaatgtgccttactacacacagctcg
gcggcagggaaaaggagtcaaagaccgtgtctcttccctgatgggctgat
ggctctacttgtagggggatgggagaataccatcttctctacccatgggt
agatcggaaaaggctgagcccaggcttggggaccatgctggggataagac
actcctgactctgtctaccatccccttcttgagctcagaatctccaccta
tttgggcagtggctgctctctctctcgactctcagctcacctttcccctc
tttcctctctctctaattctgtctctctttccatgattcattcttcctgt
ctatttttccttcttgcctttctgtctctgccttcgcctccttgttttct
gcccatgactctcctcttccttctcatgtgatcagcttgcttgcttgctt
tctttctttctttctttctttctttctttctttctttctttctttctttc
ttccttccttccttccttccttccttccttccttttcttttctctccccc
ccaaagactgtttcatctttgcatgttttatgcctcttgctttctctctc
agtgtctctgtctcttgctcccagttttctttttcttttcttttttcttt
ttcttttttggtttttcgagtcagggtttctttgtgtagtcctggctgtc
ctggaactcactctgtagaccaggctggccttcgaactcagaaatccgcc
tgcctctgccctcccaagtgcttgggattaaaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_7660374_7660931
seq2: B6Ng01-207B14.b_44_601 (reverse)

seq1  GAGAGGGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50

seq1  GAAGAAAGTACAAAGTACACATGGTTAGGGATGTGGCTCAGTGGTTAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGTACAAAGTACACATGGTTAGGGATGTGGCTCAGTGGTTAGAC  100

seq1  AGTTTAAGAAGCATTAGTCCGGGCAGTGGTGGCCCACGCCTTTAATCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAGAAGCATTAGTCCGGGCAGTGGTGGCCCACGCCTTTAATCCCA  150

seq1  GCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGACAGCCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGACAGCCTGG  200

seq1  TCTACAGAGTGAGTTCCAGGATAGCATTAGGTTCGGTTCCCAGCACCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGAGTGAGTTCCAGGATAGCATTAGGTTCGGTTCCCAGCACCACA  250

seq1  GAAACTTGGAGTGGTGTTGCACACCTGTCATCCCAGCCCCGGGGAGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTGGAGTGGTGTTGCACACCTGTCATCCCAGCCCCGGGGAGGTGG  300

seq1  AATCTCGAAGCTCCGAAGCTCAATATCATGTAGTTTGTGCTGCAGGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCGAAGCTCCGAAGCTCAATATCATGTAGTTTGTGCTGCAGGAGAC  350

seq1  CTTGCCTCACATAACAACCACATGTTCTTAGTCTGAACATTCATTCTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTCACATAACAACCACATGTTCTTAGTCTGAACATTCATTCTAAC  400

seq1  TCCTTTGTTGCTAAATATGGCAGGTTTAAACATCAGCAATACTTGGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGTTGCTAAATATGGCAGGTTTAAACATCAGCAATACTTGGGTAA  450

seq1  TTTATTACTGTTTCTTGGTGCATTTATGCTAATACTGCCAGTTCAGAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTACTGTTTCTTGGTGCATTTATGCTAATACTGCCAGTTCAGAATG  500

seq1  AAGCTAATGAGAATACTGTCAAATGACATTTGTTAGAATATCATCACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAATGAGAATACTGTCAAATGACATTTGTTAGAATATCATCACACA  550

seq1  ATGAATTC  558
      ||||||||
seq2  ATGAATTC  558

seq1: chrX_7542420_7543201
seq2: B6Ng01-207B14.g_67_851

seq1  GAATTCTTACTATTCTTATATCCTCAATGTGCCTTACTACACACAGCTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTATTCTTATATCCTCAATGTGCCTTACTACACACAGCTCG  50

seq1  GCGGCAGGGAAAAGGAGTCAAAGACCGTGTCTCTTCCCTGATGGGCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCAGGGAAAAGGAGTCAAAGACCGTGTCTCTTCCCTGATGGGCTGAT  100

seq1  GGCTCTACTTGTAGGGGGATGGGAGAATACCATCTTCTCTACCCATGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTACTTGTAGGGGGATGGGAGAATACCATCTTCTCTACCCATGGGT  150

seq1  AGATCGGAAAAGGCTGAGCCCAGGCTTGGGGACCATGCTGGGGATAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCGGAAAAGGCTGAGCCCAGGCTTGGGGACCATGCTGGGGATAAGAC  200

seq1  ACTCCTGACTCTGTCTACCATCCCCTTCTTGAGCTCAGAATCTCCACCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGACTCTGTCTACCATCCCCTTCTTGAGCTCAGAATCTCCACCTA  250

seq1  TTTGGGCAGTGGCTGCTCTCTCTCTCGACTCTCAGCTCACCTTTCCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCAGTGGCTGCTCTCTCTCTCGACTCTCAGCTCACCTTTCCCCTC  300

seq1  TTTCCTCTCTCTCTAATTCTGTCTCTCTTTCCATGATTCATTCTTCCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTCTCTCTAATTCTGTCTCTCTTTCCATGATTCATTCTTCCTGT  350

seq1  CTATTTTTCCTTCTTGCCTTTCTGTCTCTGCCTTCGCCTCCTTGTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTCCTTCTTGCCTTTCTGTCTCTGCCTTCGCCTCCTTGTTTTCT  400

seq1  GCCCATGACTCTCCTCTTCCTTCTCATGTGATCAGCTTGCTTGCTTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGACTCTCCTCTTCCTTCTCATGTGATCAGCTTGCTTGCTTGCTT  450

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  500

seq1  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTCTTTTCTCTCCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTCTTTTCTCTCCCCC  550

seq1  CCAAAGACTGTTTCATCTTTGCATGTTTTATGCCTCTTGCTTTCTCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGACTGTTTCATCTTTGCATGTTTTATGCCTCTTGCTTTCTCTCTC  600

seq1  AGTGTCTCTGTCTCTTGCTCCCAGTTTTCTTTTTCTTTTCTTTTTTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTCTGTCTCTTGCTCCCAGTTTTCTTTTTCTTTTCTTTTTTCTTT  650

seq1  TTCTTTTTTGGTTTTTCGAGTCAGGGTTTCTTTGTGTAGTCCTGGCTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTGGTTTTTCGAGTCAGGGTTTCTTTGTGTAGTCCTGGCTGTC  700

seq1  CTGGAACTCACTCTGTAGACCAGGCTGGCC-TCGAACTCAGAAATCCGCC  749
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGGAACTCACTCTGTAGACCAGGCTGGCCTTCGAACTCAGAAATCCGCC  750

seq1  TGCCTCTG-CCTCCCAAGTGC-TGGGATTAAAGGC  782
      |||||||| |||||||||||| |||||||||||||
seq2  TGCCTCTGCCCTCCCAAGTGCTTGGGATTAAAGGC  785