BAC Information

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BAC

Clone NameB6Ng01-207E02
ChromosomeX (Build37)
Map Location 128,769,246 - 128,770,169
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670449, LOC245600, EG631264
Downstream geneLOC665846, LOC665850, LOC665854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207E02.g
ACCGA026461
length1,130
definitionB6Ng01-207E02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctttgggagttcctagagggacggactttctgggtcagaca
tgcttgggattgtaggccatcagaccatccctcccaaggtgatggtcatg
aaatgacctaatgcctctctcccctttgttcagaaaaatcttcaaaacca
cctttattttctggtggttgacttttaagataaccctgctaccctgtata
aagaaaaaccgtggtgctttgctatttcctttctggtcttgggtgcaggg
ggcttttgtttcaagggcctattgaactacactaaaaactttgaaaatct
taaaacatggaaatacatgtcataaacaataaactagaatattaacttgc
tccctcttatttttaaactttttttttttttttatcaaaaaactgcctta
taaatgtgtgcttcttgccggcactgggactatgcccggaggtacataat
taaacaatgcaatatacaaaagacttgccttcttgcacaaacctaatttg
ctctactaaggattttacagcttgttcttcacaatcataacctcctttat
atgcttatataaaaggggtatgtttgttacaatctgctaagacattacat
tttaccgcgagcctgacttaactgacacatagagaaataaacccgaagtg
gcggggggggccttgatgctctaatacaagactttgatgctgaaaggatt
tcttcatctttaatgctgaggggaaaaaaaggactttgaccttcatatat
tgtccatgtccaacagagatatgccacattaaaggtatttgtctaacaaa
gttaataagtatttgagtttggtagcaatgctgctcaactcacattccac
tctttgtgggacaggtctttacttcttactgagtctgactcatttcatta
gagtgagatgaccctttggcattttctgtagcaattgtgattgattatag
accattatttgattgttctttgttagttcatataacaactccacatatgt
atcacatatgtattttgaatgttttgtatatgtatattttccatgttggg
tctcgagaatggcatgtattatcccaccaatatattcattgtgacattaa
ttgtacactgtaaatgtgttcatggacttg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_128769246_128770169
seq2: B6Ng01-207E02.g_264_1191 (reverse)

seq1  CAAGTCCAAATGGGACACATTTTCA-TGTCAATTTTATGTCACAATGAAT  49
      ||||||||    | |||||||| || |||  | || ||||||||||||||
seq2  CAAGTCCA---TGAACACATTTACAGTGTACAATTAATGTCACAATGAAT  47

seq1  ATAATGGTGGGATTATTACAATGCCATCTTTGGAGGCCCCACATTG-AAA  98
      ||| |||||||| || ||| ||||||| | | ||| ||| |||| | |||
seq2  ATATTGGTGGGA-TAATAC-ATGCCAT-TCTCGAGACCCAACATGGAAAA  94

seq1  TATACAATTATAC-AAACATTC-AAATACATATTGTGATACATATGT-GA  145
      ||||||  ||||| |||||||| ||||||||| |||||||||||||| ||
seq2  TATACA--TATACAAAACATTCAAAATACATA-TGTGATACATATGTGGA  141

seq1  G-TGTTATATGAACTAACAAAGAAACAATCAAATAATGGTTCTTATATCA  194
      | |||||||||||||||||||| |||||||||||||||| |||   ||||
seq2  GTTGTTATATGAACTAACAAAG-AACAATCAAATAATGG-TCTATAATCA  189

seq1  ATCAC-ATTGCTACAG-AAATGCC-AAGGGTCATCTCACTCTAATGAAAT  241
      ||||| |||||||||| ||||||| |||||||||||||||||||||||||
seq2  ATCACAATTGCTACAGAAAATGCCAAAGGGTCATCTCACTCTAATGAAAT  239

seq1  GAGTCAGACTCAGTAAGAAGT-AAGACCTGTCCCACAAAGAGTGGAATGT  290
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAGTCAGACTCAGTAAGAAGTAAAGACCTGTCCCACAAAGAGTGGAATGT  289

seq1  GAGTTGAGCAGCATTGCTACCAAACTCAAATACTTATTAACTTTGTTAGA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAGCAGCATTGCTACCAAACTCAAATACTTATTAACTTTGTTAGA  339

seq1  CAAATACC-TTAATGTGGCATATCTCTGTTGGACATGGACAATATATGAA  389
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACCTTTAATGTGGCATATCTCTGTTGGACATGGACAATATATGAA  389

seq1  GGTCAAAGTCCTTTTTTTCCCCTCAGCATTAAAGATGAAGAAATCCTTTC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAAGTCCTTTTTTTCCCCTCAGCATTAAAGATGAAGAAATCCTTTC  439

seq1  AGCATCAAAGTTTTGAATTAGTGCATCAATTAACACCGTGCTACTTCCTA  489
      ||||||||||| ||| ||||| |||||||    | ||  || |||||   
seq2  AGCATCAAAGTCTTGTATTAGAGCATCAAGGCCCCCCCCGCCACTTCGGG  489

seq1  TCTCTTTCTCAATCTGTCAGTTATGACTGTTTCCCTGGAAAAGGTAATGT  539
      | | |||||| || ||||||||| | | |  || | | |||| |||||||
seq2  TTTATTTCTCTATGTGTCAGTTAAGTCAGGCTCGCGGTAAAATGTAATGT  539

seq1  GTAAGTTGATTTTAAAAATGATGAATGTTTCATATAAGCATTTGAAAGGA  589
       | ||  |||| ||| ||  ||     ||| |||||||||| | ||||||
seq2  CTTAGCAGATTGTAACAAACATACCCCTTTTATATAAGCATAT-AAAGGA  588

seq1  GGCT-GGATAGTGTATAACACTTTGGTTTATAACCT--GTAGTGAAAATA  636
      || |  ||| ||| | ||||   ||  | | | |||  |||| | |||| 
seq2  GGTTATGATTGTGAAGAACAAGCTG--TAAAATCCTTAGTAGAGCAAATT  636

seq1  CTGTTT-TAAAAGATAAAAAGTCTTTT-TATATTGCA-TACTTAATTATT  683
        |||| |  ||||    ||||||||| ||||||||| |  |||||||| 
seq2  AGGTTTGTGCAAGAAGGCAAGTCTTTTGTATATTGCATTGTTTAATTATG  686

seq1  TATGGAAGTGCATAGTCCAATTG-GGACTAGTGTTGATACAGATCTCTGG  732
      ||     | ||||||||| | ||  | | ||     | |||  | |  ||
seq2  TACCTCCGGGCATAGTCCCAGTGCCGGCAAG-AAGCACACATTTATAAGG  735

seq1  AACTTTCCTAAGATTTTCTCCCAAATGGTGTGTAATCCAAAGGAGTAGTA  782
       | |||  |  |||        |||    || |||    |||  | || |
seq2  CAGTTT--TTTGATAAAAAAAAAAAAAAAGTTTAAAAATAAGAGGGAGCA  783

seq1  AAAATGGTTAATAATAT-TTTGTTTGATTCAGCAAACAAATG--ATAGAG  829
      |     ||||||| | |  ||  ||| ||          |||  ||  | 
seq2  A-----GTTAATATTCTAGTTTATTGTTT----------ATGACATGTAT  818

seq1  TTCC-----TAAAGATTTCTAAA-----------AGATAAATAGGCCATC  863
      ||||     | |||||||  |||           || | |||||||| | 
seq2  TTCCATGTTTTAAGATTTTCAAAGTTTTTAGTGTAGTTCAATAGGCCCTT  868

seq1  ATAACAAAAGGGAAACCC--AAGATAAGACCAGAAAGGAAATAGCAACTT  911
        ||||||||     |||   |   ||||||||||||||||||||||   
seq2  GAAACAAAAG---CCCCCTGCACCCAAGACCAGAAAGGAAATAGCAAAGC  915

seq1  ATCATGGTTTTTC  924
      | || ||||||||
seq2  ACCACGGTTTTTC  928