BAC Information

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BAC

Clone NameB6Ng01-210H22
ChromosomeX (Build37)
Map Location 141,619,001 - 141,619,725
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666628, LOC666633, LOC100039378, LOC100039243, Alg13, LOC100039407, Trpc5, LOC100039436, Zcchc16, LOC666655
Downstream geneLOC623591, Lhfpl1, Amot, EG434860, LOC100039313, LOC623697, LOC623731, LOC237096, LOC100039558
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210H22.bB6Ng01-210H22.g
ACCGA028819GA028820
length7241,192
definitionB6Ng01-210H22.b B6Ng01-210H22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggtacagaatagcagctactatacggactctaatttggccaa
gacagagatagtgccagtgagattcagttgcatatatcatagtgatagtg
tctcatgtacatgaaagtgatatgggcagttgtcattgtcacccatctaa
aactgtcagagacaaatctgtgtaagcagaaaggcttggttttagccctc
attactgtaagaatttgaggatattttagataaattgggagagccttcaa
agaattagacagggttcagtctgcaatgcgtgctatcagagagcaaacat
aattggatatcttaataaaacctacccacaaggcaagaatactagcccaa
tacttaagtctgcacttagtaagaaaacagcaatcacatggattaagtca
gaacagatgggatgttagctcatctctataattaaggaaaatatttatgt
ttttaagttgatatatctccttcatggtgtacgtatgtctgatactggtg
acctaagatgttggtcatgggaagatagagaactttaaggcctagctatg
agttatagaccacatcctagtaccaacaaaatcagtgttgtagccacagg
ctagctccctcaagtcggaatctgcctttacttctctcacagttcaggct
acaatctaaatgctttatagcagtgagtaatatctcaagttctgcctcgt
aatcgtgagtgggggtgtgtgtgt

gaattccacttgatcttttggactcctcctaagggctggcatcacttttc
cagctctgcccttgtagcactctaagctcaggttgatccactacactatg
gctgctgttcttggtgatcatcccatggtactgacatctccaatacaatg
gggtgttccactccaactaggcttcaccaatagcctctcataggctctct
tcaggatgccaagcctcaaatcctttgcatgaccccttcagtcctgggcc
atcaactacagctgaggctttaccttctccaatggccttccctggcctct
cacagtgctaagcctcaacttctctccatgatcccttcatcccttcacaa
gcagtaccacctgagtgactcttacacattaccaagtccagccaaagcat
gaggtacaaccttgggtatttctcgaattttctttgtgctcccagaaaac
aatttccagaagatttcacctcagtgatgctagtctcttctttttttttt
ttttttcatggttttctttctttttttttaatttatttttttattacata
ttttcctcaattacatttccaatgctatcccaaaagtcccccataccctc
cccccacttccctacccactcattcccatttttttttttgccctggcgtt
cccctgtacttcttaatcaccgctaattccttagctccagctaaccagca
tcaattttcccagttagttccttccattcttaactctagagccagagcca
catggctgaaactgccgagttctgctgcttacaggaactagaaacatgat
ccccttgtactattacattatcactagctttatgttttctaaatcctcca
ctgcctaagcttggctatcctgggtcttgctctgtagattgaccttgaat
gcagagatcagcatgcctgttctcatgggattaaaggtgttgttactacc
atgcctgggattaatttagctgggtagaaatattgctccaaagtcccact
ccctaatctgttatctcttagaacacaggaattggctacattcactcctg
gaattgcctttatactcaacaatatattttaatatttgccttctaagctt
gctatgcctggtcaaccttatcttagagaactggcatactgggtccatcc
atagtcagcttcaaggcgctgtaaaccacattgaccatatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_141619001_141619725
seq2: B6Ng01-210H22.b_45_768

seq1  GAATTCCTGGTACAGAATAGCAGCTACTATACGGACTCTAATTTGGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGTACAGAATAGCAGCTACTATACGGACTCTAATTTGGCCAA  50

seq1  GACAGAGATAGTGCCAGTGAGATTCAGTTGCATATATCATAGTGATAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGATAGTGCCAGTGAGATTCAGTTGCATATATCATAGTGATAGTG  100

seq1  TCTCATGTACATGAAAGTGATATGGGCAGTTGTCATTGTCACCCATCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTACATGAAAGTGATATGGGCAGTTGTCATTGTCACCCATCTAA  150

seq1  AACTGTCAGAGACAAATCTGTGTAAGCAGAAAGGCTTGGTTTTAGCCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCAGAGACAAATCTGTGTAAGCAGAAAGGCTTGGTTTTAGCCCTC  200

seq1  ATTACTGTAAGAATTTGAGGATATTTTAGATAAATTGGGAGAGCCTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGTAAGAATTTGAGGATATTTTAGATAAATTGGGAGAGCCTTCAA  250

seq1  AGAATTAGACAGGGTTCAGTCTGCAATGCGTGCTATCAGAGAGCAAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAGACAGGGTTCAGTCTGCAATGCGTGCTATCAGAGAGCAAACAT  300

seq1  AATTGGATATCTTAATAAAACCTACCCACAAGGCAAGAATACTAGCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGATATCTTAATAAAACCTACCCACAAGGCAAGAATACTAGCCCAA  350

seq1  TACTTAAGTCTGCACTTAGTAAGAAAACAGCAATCACATGGATTAAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAGTCTGCACTTAGTAAGAAAACAGCAATCACATGGATTAAGTCA  400

seq1  GAACAGATGGGATGTTAGCTCATCTCTATAATTAAGGAAAATATTTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGATGGGATGTTAGCTCATCTCTATAATTAAGGAAAATATTTATGT  450

seq1  TTTTAAGTTGATATATCTCCTTCATGGTGTACGTATGTCTGATACTGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTTGATATATCTCCTTCATGGTGTACGTATGTCTGATACTGGTG  500

seq1  ACCTAAGATGTTGGTCATGGGAAGATAGAGAACTTTAAGGCCTAGCTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGATGTTGGTCATGGGAAGATAGAGAACTTTAAGGCCTAGCTATG  550

seq1  AGTTATAGACCACATCCTAGTACCAACAAAATCAGTGTTGTAGCCACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAGACCACATCCTAGTACCAACAAAATCAGTGTTGTAGCCACAGG  600

seq1  CTAGCTCCCTCAAGTCGGAATCTGCCTTTACTTCTCTCACAGTTCAGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCCCTCAAGTCGGAATCTGCCTTTACTTCTCTCACAGTTCAGGCT  650

seq1  ACAATCTAAATGCTTTATAGCAGTGAGTAATATCTCAAGTTCTGCCTCGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTAAATGCTTTATAGCAGTGAGTAATATCTCAAGTTCTGCCTCGT  700

seq1  AATCGTGAGTGGGGTGTGTGTGTGT  725
      |||||||||||||| ||||||||||
seq2  AATCGTGAGTGGGG-GTGTGTGTGT  724


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