BAC Information

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BAC

Clone NameB6Ng01-211A23
ChromosomeX (Build37)
Map Location 162,675,052 - 162,676,103
singlet/doubletsinglet
Overlap genenone
Upstream geneGlra2, LOC100040753, Gemin8
Downstream geneGpm6b, Ofd1, Trappc2, Rab9, LOC100040795, A630018P17Rik, Egfl6, LOC100041912, LOC641660, LOC667791, EG667794, LOC100040850, LOC627268, Tmsb4x
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211A23.bB6Ng01-211A23.g
ACCGA029237GA029238
length1,052505
definitionB6Ng01-211A23.b B6Ng01-211A23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaacaggctggctagtccatcttcggcactctggtttccccaga
ttttcttaagacttttgacgtcagtggcttggtgaaatcaatccagaaca
cttgcaaaatgagggaatgttcctatgaaaatgtgactttcctttttaat
catagcatcccatcgcaactacctccaatatttggacagctgttctttct
tttctgtggttaaaaaaaaaaatccaatatgcgatggtagcagacgaaag
ggtcactatcatctctgtgtacaaaactttccagctcttgattcttaagt
agcttacagaagccatccatacatacactccttctgattgggaatgccca
aatcccattctggtgttttttttgtttcctaggagtcgactgagatataa
gagctaaccaaagggctcctccacaaaccaggacttgacacgcattcctc
tctctcatcttcacccagaccatcttgggctgtgtgttcttcacaggcag
cctgaggtaggcacctgtggttgtattcctgcataaggatgcactcaggg
ctcatgcaaagggattactctctggtaataggaaaactgaaacctgtgag
atccctgctgctttattaaccgcatgaagattgggtaggaaggattgttc
ccgtgggattgtgaaaatgagccagtgagccgcctagcacaaatctctgt
ccttttatgtaaaatattattaggctctgccttgatacaatctttcctaa
tccaataaatttcaatggatgaaatgtttgcttcctcctccctttctcag
tcccaaagcctctctcttgtggcttaaatgtcccttaaatgcactatcta
gtgttactgttttacgtaaccctctgtttcaagtatcacactgtatttcc
aaaaccataaggaacacaacataaatattcccggtgagcatcggcctcag
gactgccaggcagggtcttatggcttgtcttaagacttctgtttgacaga
aaggttcttctcttcctagagagccgaaagattttaatgccccaacgcag
tt

actgtgtagatggaactggcctcaaactgttgattgtcttgcctctacct
cctctgaatgctggtatttacaaatgcataccacctcacttccttacttg
tggaggttaacttctcttaactaggaaactcatgacttctctgactatat
ttttagtcattaaattagtatatgtttttgttagtgttgtgttgctgtga
agaaatgtattttacatggggcttgcttaccgtttgagaggtttagtcca
ttgtcatggtgaggaggagcatgggaacatccaggcaggcattgtgctgg
agaagtagttgagaattctacagtaagatctgcaggcagtaggaagagag
agctcctgggcctggcttgggtgtttgcaaccataaagcccatcctcagt
gacacaattgtgcctgccacaaactctcaatattttaatctactcctgct
atccctttctttccctgtgtaccctttggtgatgtgtgtgtgtgtgtgtg
tgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_162675052_162676103
seq2: B6Ng01-211A23.b_46_1097

seq1  GAATTCAAACAGGCTGGCTAGTCCATCTTCGGCACTCTGGTTTCCCCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAGGCTGGCTAGTCCATCTTCGGCACTCTGGTTTCCCCAGA  50

seq1  TTTTCTTAAGACTTTTGACGTCAGTGGCTTGGTGAAATCAATCCAGAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAAGACTTTTGACGTCAGTGGCTTGGTGAAATCAATCCAGAACA  100

seq1  CTTGCAAAATGAGGGAATGTTCCTATGAAAATGTGACTTTCCTTTTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAAATGAGGGAATGTTCCTATGAAAATGTGACTTTCCTTTTTAAT  150

seq1  CATAGCATCCCATCGCAACTACCTCCAATATTTGGACAGCTGTTCTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCATCCCATCGCAACTACCTCCAATATTTGGACAGCTGTTCTTTCT  200

seq1  TTTCTGTGGTTAAAAAAAAAAATCCAATATGCGATGGTAGCAGACGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGGTTAAAAAAAAAAATCCAATATGCGATGGTAGCAGACGAAAG  250

seq1  GGTCACTATCATCTCTGTGTACAAAACTTTCCAGCTCTTGATTCTTAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACTATCATCTCTGTGTACAAAACTTTCCAGCTCTTGATTCTTAAGT  300

seq1  AGCTTACAGAAGCCATCCATACATACACTCCTTCTGATTGGGAATGCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTACAGAAGCCATCCATACATACACTCCTTCTGATTGGGAATGCCCA  350

seq1  AATCCCATTCTGGTGTTTTTTTTGTTTCCTAGGAGTCGACTGAGATATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCATTCTGGTGTTTTTTTTGTTTCCTAGGAGTCGACTGAGATATAA  400

seq1  GAGCTAACCAAAGGGCTCCTCCACAAACCAGGACTTGACACGCATTCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAACCAAAGGGCTCCTCCACAAACCAGGACTTGACACGCATTCCTC  450

seq1  TCTCTCATCTTCACCCAGACCATCTTGGGCTGTGTGTTCTTCACAGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATCTTCACCCAGACCATCTTGGGCTGTGTGTTCTTCACAGGCAG  500

seq1  CCTGAGGTAGGCACCTGTGGTTGTATTCCTGCATAAGGATGCACTCAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGTAGGCACCTGTGGTTGTATTCCTGCATAAGGATGCACTCAGGG  550

seq1  CTCATGCAAAGGGATTACTCTCTGGTAATAGGAAAACTGAAACCTGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCAAAGGGATTACTCTCTGGTAATAGGAAAACTGAAACCTGTGAG  600

seq1  ATCCCTGCTGCTTTATTAACCGCATGAAGATTGGGTAGGAAGGATTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGCTGCTTTATTAACCGCATGAAGATTGGGTAGGAAGGATTGTTC  650

seq1  CCGTGGGATTGTGAAAATGAGCCAGTGAGCCGCCTAGCACAAATCTCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGGATTGTGAAAATGAGCCAGTGAGCCGCCTAGCACAAATCTCTGT  700

seq1  CCTTTTATGTAAAATATTATTAGGCTCTGCCTTGATACAATCTTTCCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTATGTAAAATATTATTAGGCTCTGCCTTGATACAATCTTTCCTAA  750

seq1  TCCAATAAATTTCAATGGATGAAATGTTTGCTTCCTCCTCCCTTTCTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATAAATTTCAATGGATGAAATGTTTGCTTCCTCCTCCCTTTCTCAG  800

seq1  TCCCAAAGCCTCTCTCTTGTGGCTTAAATGTCCCTTAAATGCACTATCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAGCCTCTCTCTTGTGGCTTAAATGTCCCTTAAATGCACTATCTA  850

seq1  GTGTTACTG-TTTACGTAACCCTCTG-TTCAAGTATCACACTGTATTTCC  898
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  GTGTTACTGTTTTACGTAACCCTCTGTTTCAAGTATCACACTGTATTTCC  900

seq1  AAAACCATAAAGGAACACAACATAAAATATTCCCGGTGAGCATCGGCCTC  948
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  AAAACCAT-AAGGAACACAACAT-AAATATTCCCGGTGAGCATCGGCCTC  948

seq1  AGGAACTGCCAGGCAGGGTCTTATGGCTTGTC-TAAGACCTCTG-TTGAC  996
      ||| |||||||||||||||||||||||||||| |||||| |||| |||||
seq2  AGG-ACTGCCAGGCAGGGTCTTATGGCTTGTCTTAAGACTTCTGTTTGAC  997

seq1  AGGAAGGTTCTTCTCTTCCTAGAGAAGCCGAAAGATTTTAAATGCCCAAC  1046
      || ||||||||||||||||||||| ||||||||||||||||   ||||||
seq2  AGAAAGGTTCTTCTCTTCCTAGAG-AGCCGAAAGATTTTAATGCCCCAAC  1046

seq1  GCAGTT  1052
      ||||||
seq2  GCAGTT  1052


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