BAC Information

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BAC

Clone NameB6Ng01-212J01
ChromosomeX (Build37)
Map Location 93,466,367 - 93,645,868
singlet/doubletdoublet
Overlap geneVsig4, B230358A15Rik
Upstream geneLOC100042189, 2810002O09Rik, Asb12, LOC668202, AK129302, A130028J20Rik, 1700010D01Rik, Las1l, Msn, Psmb7-ps1, LOC668221
Downstream geneHeph, Gpr165, LOC675824, LOC668234, EG668236, LOC668238, Pgr15l, Eda2r
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212J01.bB6Ng01-212J01.g
ACCGA030328GA030329
length991994
definitionB6Ng01-212J01.b B6Ng01-212J01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,466,367 - 93,467,256)(93,645,071 - 93,645,868)
sequence
gaattcccacagtgaatgactgacctaccctttcataaagtcttttgaat
attcagaaaaattatgagaaaggcataagaacatagtcaggtttcatatt
agcagaaaataaaaaaagtgacataattttaaagtggttatacactggta
tcttaactaaacaaacaacattgttctacagtaaataatacatgatttat
ttgctcttggaaattaagaaattctctaaccagtcattaactgacctcta
agtaaatcaaatagtgatttcagtggctactcatgacaatgaatacacaa
cattatttttgaaaaatcatcaagtcctgaacaatcaatcacctgaccaa
tcaatcaaacaaacaaaaaagcagagaagaagaacatgtatactccttcc
tgtcagcaccagctctagacgaccttgggcctgaacttagcggacagtcc
catggtctccagaggactctccattcaacaggtgccctagcatacctagg
atcttgaaaagtggaacacaacatttactctaacagaaccaggggtgcct
ggggtcagctggagcacagacagaggaacatctcccaaccagtggctcag
gttccttccggaccacactggtctacctggatttcaaactcagtggacag
ccccatggtccccagatgaggtaaaacttccaggtgctataacaattcca
ggatcttaggatccctggattcctggagcttggtcacatcaggatctcag
gggctcagaggaagcatgactgccaagacctctgagacacccataatctc
agcatcagaggatcacagaatcacaggaccacaaagaaagctggactcag
agttctgactcaactgggattataggaaggacaggatccagtcagatata
ttgagggcagggagcacttgagataatcagatggcaggaggcaagcataa
gaacagaagcaacagaaaccaaggtttatttggcatcatca
gaattcttaaatataggtatccacatatgtacctttttacatgcatgaac
catgtgggggtctaggacagttttattctatatatattctgatcacaata
ctcttaggtttcatgggtatttgcgtattgtgggtagtgtgacctggtac
ctggaagaataacttttactttacccttttcaattagttagattttcaac
cctcataaattaatttcatttttattttctcagaaaacacttggaaaatg
gatatgaagcttttgttttattctctttgtgtcagaaagaaaccttttga
agttaggaagacagcttaatggataaagtatgaagacattagtttggatc
cccagaacaatataaaggctgagtggtagcacacacctgtaatcttagtt
ctgctacaaggagatgaggtcatagccagagataatagaatcttcaggag
ctcacactcagttagcctggcatatgtggcagtggggtagacaacccatc
tcaaacaagatagggacccaacattagaaattcttctctgaccaccacac
aagtactcacattcacacacacaaatattaagagtttcatatgcacaacc
attataatacaaccagctttccatgaaattgaacacaataaaatctcagg
ttatagtctatacagtagaaactgggtttcttttcagctatacttttcaa
atcagtcacttttatgtctatcactcctctggaaaatggttactctttgc
atggaaagaaacctagattgaggcagaacagagcctcacccacaaggttt
taaatctcatttcctgaaatttataaacaattatattacgtggcaaaggt
caattaagatcaaagaagtaatttaatcacctagtcacctgggttgctaa
tcattttggcccttaaaaatgggcagatgatcctgggttttctgggttgg
gccaagtgttagctgactgatcattaatgtagaagagaaagcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_93466367_93467256
seq2: B6Ng01-212J01.b_47_936

seq1  GAATTCCCACAGTGAATGACTGACCTACCCTTTCATAAAGTCTTTTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACAGTGAATGACTGACCTACCCTTTCATAAAGTCTTTTGAAT  50

seq1  ATTCAGAAAAATTATGAGAAAGGCATAAGAACATAGTCAGGTTTCATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAAAAATTATGAGAAAGGCATAAGAACATAGTCAGGTTTCATATT  100

seq1  AGCAGAAAATAAAAAAAGTGACATAATTTTAAAGTGGTTATACACTGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAATAAAAAAAGTGACATAATTTTAAAGTGGTTATACACTGGTA  150

seq1  TCTTAACTAAACAAACAACATTGTTCTACAGTAAATAATACATGATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACTAAACAAACAACATTGTTCTACAGTAAATAATACATGATTTAT  200

seq1  TTGCTCTTGGAAATTAAGAAATTCTCTAACCAGTCATTAACTGACCTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTGGAAATTAAGAAATTCTCTAACCAGTCATTAACTGACCTCTA  250

seq1  AGTAAATCAAATAGTGATTTCAGTGGCTACTCATGACAATGAATACACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATCAAATAGTGATTTCAGTGGCTACTCATGACAATGAATACACAA  300

seq1  CATTATTTTTGAAAAATCATCAAGTCCTGAACAATCAATCACCTGACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTTTGAAAAATCATCAAGTCCTGAACAATCAATCACCTGACCAA  350

seq1  TCAATCAAACAAACAAAAAAGCAGAGAAGAAGAACATGTATACTCCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAAACAAACAAAAAAGCAGAGAAGAAGAACATGTATACTCCTTCC  400

seq1  TGTCAGCACCAGCTCTAGACGACCTTGGGCCTGAACTTAGCGGACAGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCACCAGCTCTAGACGACCTTGGGCCTGAACTTAGCGGACAGTCC  450

seq1  CATGGTCTCCAGAGGACTCTCCATTCAACAGGTGCCCTAGCATACCTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCTCCAGAGGACTCTCCATTCAACAGGTGCCCTAGCATACCTAGG  500

seq1  ATCTTGAAAAGTGGAACACAACATTTACTCTAACAGAACCAGGGGTGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAAAAGTGGAACACAACATTTACTCTAACAGAACCAGGGGTGCCT  550

seq1  GGGGTCAGCTGGAGCACAGACAGAGGAACATCTCCCAACCAGTGGCTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCAGCTGGAGCACAGACAGAGGAACATCTCCCAACCAGTGGCTCAG  600

seq1  GTTCCTTCCGGACCACACTGGTCTACCTGGATTTCAAACTCAGTGGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTCCGGACCACACTGGTCTACCTGGATTTCAAACTCAGTGGACAG  650

seq1  CCCCATGGTCCCCAGATGAGGTAAAACTTCCAGGTGCTATAACAATTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGGTCCCCAGATGAGGTAAAACTTCCAGGTGCTATAACAATTCCA  700

seq1  GGATCTTAGGATCCCTGGATTCCTGGAGCTTGGTCACATCAGGATCTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTAGGATCCCTGGATTCCTGGAGCTTGGTCACATCAGGATCTCAG  750

seq1  GGGCTCAGAGGAAGCATGACTGCCAAGACCTCTGAGACACCCATAATCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCAGAGGAAGCATGACTGCCAAGACCTCTGAGACACCCATAATCTC  800

seq1  AGCATCAGAGGATCACAGAATCACAGGACCACAAAGAAAGCTGGACTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAGAGGATCACAGAATCACAGGACCACAAAGAAAGCTGGACTCAG  850

seq1  AGTTCTGACTCAACTGGGATTATAGGAAGGACAGGATCCA  890
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGACTCAACTGGGATTATAGGAAGGACAGGATCCA  890

seq1: chrX_93645071_93645868
seq2: B6Ng01-212J01.g_69_866 (reverse)

seq1  ACCTTGTGGGTGAGGCTCTGTTCTGCCTCAATCTAGGTTTCTTTCCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTGGGTGAGGCTCTGTTCTGCCTCAATCTAGGTTTCTTTCCATGC  50

seq1  AAAGAGTAACCATTTTCCAGAGGAGTGATAGACATAAAAGTGACTGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTAACCATTTTCCAGAGGAGTGATAGACATAAAAGTGACTGATTT  100

seq1  GAAAAGTATAGCTGAAAAGAAACCCAGTTTCTACTGTATAGACTATAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTATAGCTGAAAAGAAACCCAGTTTCTACTGTATAGACTATAACC  150

seq1  TGAGATTTTATTGTGTTCAATTTCATGGAAAGCTGGTTGTATTATAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTTTATTGTGTTCAATTTCATGGAAAGCTGGTTGTATTATAATGG  200

seq1  TTGTGCATATGAAACTCTTAATATTTGTGTGTGTGAATGTGAGTACTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCATATGAAACTCTTAATATTTGTGTGTGTGAATGTGAGTACTTGT  250

seq1  GTGGTGGTCAGAGAAGAATTTCTAATGTTGGGTCCCTATCTTGTTTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGTCAGAGAAGAATTTCTAATGTTGGGTCCCTATCTTGTTTGAGA  300

seq1  TGGGTTGTCTACCCCACTGCCACATATGCCAGGCTAACTGAGTGTGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGTCTACCCCACTGCCACATATGCCAGGCTAACTGAGTGTGAGCT  350

seq1  CCTGAAGATTCTATTATCTCTGGCTATGACCTCATCTCCTTGTAGCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGATTCTATTATCTCTGGCTATGACCTCATCTCCTTGTAGCAGAA  400

seq1  CTAAGATTACAGGTGTGTGCTACCACTCAGCCTTTATATTGTTCTGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATTACAGGTGTGTGCTACCACTCAGCCTTTATATTGTTCTGGGGA  450

seq1  TCCAAACTAATGTCTTCATACTTTATCCATTAAGCTGTCTTCCTAACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACTAATGTCTTCATACTTTATCCATTAAGCTGTCTTCCTAACTTC  500

seq1  AAAAGGTTTCTTTCTGACACAAAGAGAATAAAACAAAAGCTTCATATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTTTCTTTCTGACACAAAGAGAATAAAACAAAAGCTTCATATCCA  550

seq1  TTTTCCAAGTGTTTTCTGAGAAAATAAAAATGAAATTAATTTATGAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAGTGTTTTCTGAGAAAATAAAAATGAAATTAATTTATGAGGGT  600

seq1  TGAAAATCTAACTAATTGAAAAGGGTAAAGTAAAAGTTATTCTTCCAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATCTAACTAATTGAAAAGGGTAAAGTAAAAGTTATTCTTCCAGGT  650

seq1  ACCAGGTCACACTACCCACAATACGCAAATACCCATGAAACCTAAGAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTCACACTACCCACAATACGCAAATACCCATGAAACCTAAGAGTA  700

seq1  TTGTGATCAGAATATATATAGAATAAAACTGTCCTAGACCCCCACATGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATCAGAATATATATAGAATAAAACTGTCCTAGACCCCCACATGGT  750

seq1  TCATGCATGTAAAAAGGTACATATGTGGATACCTATATTTAAGAATTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCATGTAAAAAGGTACATATGTGGATACCTATATTTAAGAATTC  798