BAC Information

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BAC

Clone NameB6Ng01-213D18
Chromosome10 (Build37)X (Build37)
Map Location 15,723,320 - 15,723,960135,024,669 - 135,025,033
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC637043, LOC100039492, LOC671439
Downstream geneLOC382457, LOC546472, LOC100039576
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213D18.bB6Ng01-213D18.g
ACCGA030824GA030825
length1,018860
definitionB6Ng01-213D18.b B6Ng01-213D18.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(15,723,320 - 15,723,960)(135,024,669 - 135,025,033)
sequence
gaattctagaagaaaaactccaacacaggagggtaagtacacaaaataaa
agacaagatagtaatcatctcacaacaaagccaaaagagacccacattca
cgtaaggccacatacaaaaccaaacataaaaggaactagcagtcatctct
ctctaatatctctcaatattaatggtctcatctcaccaatgaaaagacat
atgctaatagatttgatacacaaacaagttccagcactttgatgcatata
aaagcacacctccattaaaaagacaggcactacctcacagtaaaagtctg
gaaaaatatcttccaagaaaatggtcccagaaacaagttggagtcgacat
cttaatatccaataaaatagactttcaaccaaaagttatcaggtgagata
agaaaggacacttcatactcatcaaaggcaaatctgttaagagaaagcct
caattctgaacatctaatgcccaaatgaaagggcacccacattcatagaa
aaactttactaaagctcaaaactcacactgaacctcataaatattattgg
gagattttaacaccccacgctcaccaatgaacaggtcattgaaacagaag
ctaaacagagacctagtggtgaaactaatagaggttatgaatcaaattga
tttaacagatgtctacagaacatttcacttgagagagagagagagagaga
gagagagagagagagagagagagagagagagagagagagaatacaccttc
tcagcacctcatggccccttctccaaaattgaccatataattgggcacca
aatttgcctcaatgaatacaaagaagattaaaaataaatcctatgcatcc
tatcagatcaccattggctcttgtgaagtttgctgtttccatagccctat
tgttacttgtacctagcggggctactgatgttttttactgggtattttat
ttaatttgcacttcagattttatctccttttctgggttccccttgggtaa
cccccctatcccaaccct

gaattccaagagtccaggttctgactgttccttccatggagtttttataa
actttgggcccctggaagctttccttctattactccacaaggaccctaca
agtgtttctgtctgaatcaactgctgagtggagccactcagagaagaaaa
catactcctatgtgcaagcacagcagagtatctatcattaatagtgttag
ggatcagtacttaaccatggggagagtctcaagatagtccagttattggt
tggacagtctatcaatctctgctccgtcccatgtccttacaattctagta
gacaagataagttgtgggttgaaaattttctgggtgggatggtggttctt
gctcactggggttgctacttgggactcaggtgagatcccattgttttgta
ttgttttcttttttcttttttttaattatgtattttcttcatttacattt
ccaatgctatcccaaaagtcccccataccctcaaaccccccctcacctgc
ccacccactcctacttcttggccctggcattcccctgtactgagacagat
aaagatgcaagaccaaagggcctctatttccactgatggctgactaggcc
atcctctgctacatatgcagctagagacacgagctctggggggtattggt
tatttcatattgttgttccacctatagggttgcagatcccctttagctcc
ttgggtactttctctagctccttccattgagggctctgtgatccatccca
tagctgaactgtgagcatccactttctgtgtgtgctaagcccccagcata
gccctcacaagagacaagcttataatcaggttccttttcagcccaacgct
tggctagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15723320_15723960
seq2: B6Ng01-213D18.b_418_1064

seq1  CTTTCAACCAAAAGTTATCAGGTGAGATAAGAAAGGACACTTCATACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAACCAAAAGTTATCAGGTGAGATAAGAAAGGACACTTCATACTCA  50

seq1  TCAAAGGCAAATCTGTTAAGAGAAAGCCTCAATTCTGAACATCTAATGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGCAAATCTGTTAAGAGAAAGCCTCAATTCTGAACATCTAATGCC  100

seq1  CAAATGAAAGGGCACCCACATTCATAGAAAAACTTTACTAAAGCTCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAAAGGGCACCCACATTCATAGAAAAACTTTACTAAAGCTCAAAA  150

seq1  CTCACACTGAACCTCATAAATATTATTGGGAGATTTTAACACCCCACGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACTGAACCTCATAAATATTATTGGGAGATTTTAACACCCCACGCT  200

seq1  CACCAATGAACAGGTCATTGAAACAGAAGCTAAACAGAGACCTAGTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATGAACAGGTCATTGAAACAGAAGCTAAACAGAGACCTAGTGGTG  250

seq1  AAACTAATAGAGGTTATGAATCAAATTGATTTAACAGATGTCTACAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAATAGAGGTTATGAATCAAATTGATTTAACAGATGTCTACAGAAC  300

seq1  ATTTCACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  350

seq1  AGAGAGAGAGAGAGAGAGAATACACCTTCTCAGCACCTCATGGCCCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAATACACCTTCTCAGCACCTCATGGCCCCTTC  400

seq1  TCCAAAATTGACCATATAATTGGGCACCAAATTTGCCTCAATGAATAC-A  449
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCCAAAATTGACCATATAATTGGGCACCAAATTTGCCTCAATGAATACAA  450

seq1  AGAAGATTAAAA--TAATCCTATGCATCCTATCAGATCACCA-TGGCTCT  496
      ||||||||||||   ||||||||||||||||||||||||||| |||||||
seq2  AGAAGATTAAAAATAAATCCTATGCATCCTATCAGATCACCATTGGCTCT  500

seq1  TGTGAAGTTTGCTGTTTTCCATAGCCCTATTGTTACTTGTACCTAGCGGG  546
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGTGAAGTTTGCTG-TTTCCATAGCCCTATTGTTACTTGTACCTAGCGGG  549

seq1  GCTACTGATGTTTTTTACTGGGTATTTTATTT-ATTTGCATTTCAGATTT  595
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  GCTACTGATGTTTTTTACTGGGTATTTTATTTAATTTGCACTTCAGATTT  599

seq1  TATCTCC-TTTCTGGGTTTCCCCTGTGTAACCCCCCTATCCC-ACCCT  641
      ||||||| |||||||||| ||| || |||||||||||||||| |||||
seq2  TATCTCCTTTTCTGGGTTCCCCTTGGGTAACCCCCCTATCCCAACCCT  647


seq1: chrX_135024669_135025033
seq2: B6Ng01-213D18.g_499_885 (reverse)

seq1  TGTCTCTTGTGA-GACTATGC-CAGGGCCTAGCAAACACAG-AAGTAGAT  47
      |||||||||||| | ||||||   |||| ||||| |||||| |||| |||
seq2  TGTCTCTTGTGAGGGCTATGCTGGGGGCTTAGCACACACAGAAAGTGGAT  50

seq1  GTTCCCAG------TCTTGGATGGATCACAGGGCCCCCAATGG-AGGAGC  90
      | || |||      | | ||||||||||||| |||| |||||| ||||||
seq2  GCTCACAGTTCAGCTATGGGATGGATCACAGAGCCCTCAATGGAAGGAGC  100

seq1  TAGAGAAAGTATCCAAGGAGCT-GGGGGGATCTGCAACCCTATAGGTGGA  139
      ||||||||||| ||||||||||   |||||||||||||||||||||||||
seq2  TAGAGAAAGTACCCAAGGAGCTAAAGGGGATCTGCAACCCTATAGGTGGA  150

seq1  ACAACAATATGAACTAACCAATACCTCCCAGAGCTCGTGTCTCTAGCTGC  189
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  ACAACAATATGAAATAACCAATACCCCCCAGAGCTCGTGTCTCTAGCTGC  200

seq1  ACATGTATCAGAAGATGGCCTAGTCGGCCATCAGTGGAAAGAGAGGCCCA  239
      | ||||| |||| |||||||||||| |||||||||||||| |||||||| 
seq2  ATATGTAGCAGAGGATGGCCTAGTCAGCCATCAGTGGAAATAGAGGCCCT  250

seq1  TTGGTCATGAAAACTTTATATGCCCCAGTATGGGGGAACGCCAGGGCCAA  289
      |||||| ||  | |||||| || | |||||  |||||| |||||||||||
seq2  TTGGTCTTG-CATCTTTATCTGTCTCAGTACAGGGGAATGCCAGGGCCAA  299

seq1  GAAGTGGAGGTGGGTG----GGTGTGG--------GAGGGTGTGGGGGAC  327
      ||||| |  |||||||    |||| ||        |||||| ||||||||
seq2  GAAGTAGGAGTGGGTGGGCAGGTGAGGGGGGGTTTGAGGGTATGGGGGAC  349

seq1  TTTTGGGATAGCATTGGAAATGTAAATGAAATAAATAC  365
      ||||||||||||||||||||||||||||||  ||||||
seq2  TTTTGGGATAGCATTGGAAATGTAAATGAAGAAAATAC  387


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