BAC Information

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BAC

Clone NameB6Ng01-215F23
ChromosomeX (Build37)
Map Location 132,239,957 - 132,240,798
singlet/doubletsinglet
Overlap genenone
Upstream geneArmcx1, LOC100040933, LOC100040520, Armcx6, Armcx3, Armcx2, LOC637800, LOC100040987, Nxf2, B930008K04Rik, EG621246, LOC100040635, Tceal6, EG621322, Pramel3, EG621352, EG331529, EG621380, EG666040, EG666045, AV320801, EG621467, Nxf7, 4930534P07Rik, 1700008I05Rik
Downstream gene1700129I15Rik, Gprasp1, Gprasp2, Bhlhb9, LOC100041110, 2900062L11Rik, 6530401D17Rik, Bex2, Nxf3, Bex4, Tceal8, Tceal5, Bex1, LOC100040972, Wbp5, Ngfrap1, LOC666180, LOC237048, LOC666196, Kir3dl2, LOC100041079, Kir3dl1, Tceal3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215F23.bB6Ng01-215F23.g
ACCGA032360GA032361
length1,224847
definitionB6Ng01-215F23.b B6Ng01-215F23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactccctttctgtctctcattagaaaagatcagacttctaagag
ataacaacgaaacataacaaaataatatataaaagctaaaccaaaaaaac
catctattgaagttcaacaaggcaaaccagagcccaagaaaaggcacaag
agtcagagatccactcattcacacactcatgagtcccataaaaacactaa
gctggaagtcataatatacatcgcagaggacaggtgcagaccaatgccag
ccctgtgcatatcgtttcagtctctgtgagttcatatgaattttgctcag
ttgatttagagtggcttgttctcctgatgttctccatcctctctggctcc
cacattctttccaccttcctcttcttctggagttccttgagctctgagga
aagggattgcaaaagaattcagagatctgcttgcctctgctcagcagaca
ataagatttaggtgtgaccctgtcctgaaattaccatttctaccacacct
gggcctaacctagctctgtcccaggccgagcctaaactccagaatctgtc
tgcctttgtaagcataaacaaaaatacttagctgagtgggatctcctgcg
atcaccactccctaaatctcttttatttccctccttagtgttttttctga
gaaattgactcaaagctcagctgctttggttcctttagattcctgaagtc
cctcataattcatattgctaaactgagaaattatatatttttaaactcat
gttttagggttcctttagacagcattaagagtggtcctgaaggtccaaga
atttaaaggaacacgaaaatatgtacattattataaaataagccctatgc
caacagcagccatcaacactcctggaggcacacatctgctggtcctgtcc
caagggggaggaaccttagcattctgttcccaccaaggccatgatggacc
ccagaaatttatctattaaaatatctgtctatctatctatctatctatct
atctatctatctatctaactatgatgatacaccatatatacataccttta
tatggttatttataaaagattaaacttatatttaaatattaacatatgtt
attattattaaaattgaagtacatatttgacattagaaactatttcagta
cacaatattatgctactgatcaattatcttgaaattaccacgcagtcaga
taatgatctttacatagattacga
gaattccatttgtttatttttaggattacttcccatgtttttaaagtatg
tttcagaaggcccttacctatgcctatactttgaaatattattcctgttt
tactgaagtagttttacagttatacgtcttataacctttgatctcatttg
agccttgtgcaggatgagaaatgaccatgtttcatttttctaaatgtgtt
tatttagttttgatactactattaagttgaaaatactctttccacagtct
ggcatggtggtgcacgcctttaatcccagcacttatgaggcagaggcagg
atgatctctgacttcaagaccagcctggcctacagagtgagttccaggac
aggcaaggatatacagagaaaccctgtcttgaaaaaaataaagaagaaat
gctttttttttgaatattctcagtatctttgtcatgagtttattttgttt
ccactctattcttctactattcctctgtatatgttgaaatcacatatact
gatacctctatgactattctttttgctattcaggatcagattatgttctt
tttctctatttttgtaaactatcctattggagtttgattatggttggttt
tggtaatcaagctatttctaagacataataacaataatcaaacaacttga
gaaaaaagtgaatgaaagactagcactctttcttaattggtcaccagtac
tatcttaatgagtcaccattttcttctttttatttccaaatatttttatt
tagggtattttcctcatttacattttcaatgctatcccaaaagtcccccc
ataccctccccccaactcccctacccacccactcccaattatttggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_132239957_132240798
seq2: B6Ng01-215F23.g_67_913

seq1  GAATTCCATTTGTTTATTTTTAGGATTACTTCCCATGTTTTTAAAGTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTGTTTATTTTTAGGATTACTTCCCATGTTTTTAAAGTATG  50

seq1  TTTCAGAAGGCCCTTACCTATGCCTATACTTTGAAATATTATTCCTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAGGCCCTTACCTATGCCTATACTTTGAAATATTATTCCTGTTT  100

seq1  TACTGAAGTAGTTTTACAGTTATACGTCTTATAACCTTTGATCTCATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAGTAGTTTTACAGTTATACGTCTTATAACCTTTGATCTCATTTG  150

seq1  AGCCTTGTGCAGGATGAGAAATGACCATGTTTCATTTTTCTAAATGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGTGCAGGATGAGAAATGACCATGTTTCATTTTTCTAAATGTGTT  200

seq1  TATTTAGTTTTGATACTACTATTAAGTTGAAAATACTCTTTCCACAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGTTTTGATACTACTATTAAGTTGAAAATACTCTTTCCACAGTCT  250

seq1  GGCATGGTGGTGCACGCCTTTAATCCCAGCACTTATGAGGCAGAGGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGTGGTGCACGCCTTTAATCCCAGCACTTATGAGGCAGAGGCAGG  300

seq1  ATGATCTCTGACTTCAAGACCAGCCTGGCCTACAGAGTGAGTTCCAGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTCTGACTTCAAGACCAGCCTGGCCTACAGAGTGAGTTCCAGGAC  350

seq1  AGGCAAGGATATACAGAGAAACCCTGTCTTGAAAAAAATAAAGAAGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGGATATACAGAGAAACCCTGTCTTGAAAAAAATAAAGAAGAAAT  400

seq1  GCTTTTTTTTTGAATATTCTCAGTATCTTTGTCATGAGTTTATTTTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTTTTTGAATATTCTCAGTATCTTTGTCATGAGTTTATTTTGTTT  450

seq1  CCACTCTATTCTTCTACTATTCCTCTGTATATGTTGAAATCACATATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCTATTCTTCTACTATTCCTCTGTATATGTTGAAATCACATATACT  500

seq1  GATACCTCTATGACTATTCTTTTTGCTATTCAGGATCAGATTATGTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTCTATGACTATTCTTTTTGCTATTCAGGATCAGATTATGTTCTT  550

seq1  TTTCTCTATTTTTGTAAACTATCCTATTGGAGTTTGATTATGGTTGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTATTTTTGTAAACTATCCTATTGGAGTTTGATTATGGTTGGTTT  600

seq1  TGGTAATCAAGCTATTTCTAAGACATAATAACAATAATCAAACAACTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATCAAGCTATTTCTAAGACATAATAACAATAATCAAACAACTTGA  650

seq1  GAAAAAAGTGAATGAAAGACTAGCACTCTTTCTTAATTGGTCACCAGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGTGAATGAAAGACTAGCACTCTTTCTTAATTGGTCACCAGTAC  700

seq1  TATCTTAATGAGTCACCATTTTCTTC-TTTTATTTCCAAATATTTTTATT  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATCTTAATGAGTCACCATTTTCTTCTTTTTATTTCCAAATATTTTTATT  750

seq1  --AGGTATTTTCCTCATTTACATTTTCAATGCTATCCCAAAAGT-CCCCC  796
         ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAGGGTATTTTCCTCATTTACATTTTCAATGCTATCCCAAAAGTCCCCCC  800

seq1  ATACCCTCCCCCCCACTCCCCTACCCACCCACTCCCACTT-TTTGGC  842
      ||||||||||||| ||||||||||||||||||||||| || ||||||
seq2  ATACCCTCCCCCCAACTCCCCTACCCACCCACTCCCAATTATTTGGC  847