BAC Information

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BAC

Clone NameB6Ng01-216L23
ChromosomeX (Build37)
Map Location 101,580,086 - 101,580,680
singlet/doubletsinglet
Overlap genenone
Upstream geneChic1, Tsx, Tsix, Xist, Rps12-ps1, LOC668406, LOC676246, ENSMUSG00000043661, LOC668412, LOC668415, B230206F22Rik, Cnbp2, LOC100042640, Slc16a2, EG621381, EG668426, LOC668430, Rnf12, C77370, Vcp-ps, EG621542
Downstream geneUprt, Zdhhc15, Magee2, LOC622098, LOC676331, 5530601H04Rik, 2610029G23Rik, Magee1, LOC622159, LOC668454, E530001F21Rik, LOC622202, LOC100043213
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216L23.bB6Ng01-216L23.g
ACCGA033355GA033356
length783103
definitionB6Ng01-216L23.b B6Ng01-216L23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggtagagaaaaatacttgtatgaaagctttatgttcttttgt
gagtatgatggcacagcgtacagtggtacaagagaacactggaatgctgg
agatgtggcttctttggtagaatcctgcctaacatgccagagccctgggt
tcaatcctgtggactgcctaaactgagcatattagcactctagaggtgta
ggcaggaagatcagaaattcaaggtcatcttttattatatgttccagcct
ggaatatctgagtcagtctctctctctctctctctctctctctctctctc
tctgaatatctgagtctctgtctctctctctcctctctctctctctctct
ctctctctcacacacacacacatacacacacacacacacacacacacaca
cacacagagagagagagagagagagagagagagagagagagagagagaga
gaacgctcagtggtaagagcagttgctgctcttacagggaacctgggttc
agttcccagaacctacatactacctcacaactgactgtaactctagttcc
aagggatctatcaccctcttctgtactcttgggaaccaccaagcacacat
atggcacacaggcatacatgcaagcaaagcatctatacacataaataaaa
tcttaaaagaaaagttgttgtgggcctattatgagtcacattaagaagct
gactactttttagtaactatagcaacctattcttaggtaattatgagtta
ttcaagatatgaaaaagagtttttgccttaggg
gaattccaggacagccagggctacacagagaaaccctgtcttgaaaaaac
aaaacaaaacaaaacaaaacaaaaaacaaaacaaaacaaacaaacaaaaa
aaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_101580086_101580680
seq2: B6Ng01-216L23.b_45_637 (reverse)

seq1  CTTGGTGGTTCCCAAGAGTACAGAAGAGGGTGATAGATCCCTTGGAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGGTTCCCAAGAGTACAGAAGAGGGTGATAGATCCCTTGGAACTA  50

seq1  GAGTTACAGTCAGTTGTGAGGTAGTATGTAGGTTCTGGGAACTGAACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACAGTCAGTTGTGAGGTAGTATGTAGGTTCTGGGAACTGAACCCA  100

seq1  GGTTCCCTGTAAGAGCAGCAACTGCTCTTACCACTGAGCGTTCTCTCTCT  150
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  GGTTCCCTGTAAGAGCAGCAACTGCTCTTACCACTGAGCGT--TCTCTCT  148

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGT  198

seq1  GTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGAGAGAGAGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGAGAGAGAGAGAGA  248

seq1  GAGAGAGAGAGAGGAGAGAGAGAGACAGAGACTCAGATATTCAGAGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGGAGAGAGAGAGACAGAGACTCAGATATTCAGAGAGAG  298

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGACTCAGATATTCCAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGACTCAGATATTCCAGGCT  348

seq1  GGAACATATAATAAAAGATGACCTTGAATTTCTGATCTTCCTGCCTACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATATAATAAAAGATGACCTTGAATTTCTGATCTTCCTGCCTACAC  398

seq1  CTCTAGAGTGCTAATATGCTCAGTTTAGGCAGTCCACAGGATTGAACCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGAGTGCTAATATGCTCAGTTTAGGCAGTCCACAGGATTGAACCCA  448

seq1  GGGCTCTGGCATGTTAGGCAGGATTCTACCAAAGAAGCCACATCTCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCTGGCATGTTAGGCAGGATTCTACCAAAGAAGCCACATCTCCAGC  498

seq1  ATTCCAGTGTTCTCTTGTACCACTGTACGCTGTGCCATCATACTCACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGTGTTCTCTTGTACCACTGTACGCTGTGCCATCATACTCACAAA  548

seq1  AGAACATAAAGCTTTCATACAAGTATTTTTCTCTACCTGGAATTC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATAAAGCTTTCATACAAGTATTTTTCTCTACCTGGAATTC  593