BAC Information

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BAC

Clone NameB6Ng01-218C08
ChromosomeX (Build37)10 (Build37)
Map Location 164,652,571 - 164,653,723128,057,278 - 128,057,385
singlet/doubletsingletsinglet
Overlap geneFrmpd4
Upstream geneTlr8, Tlr7, Prps2, EG627311
Downstream geneEG667822, EG637566, Msl31, Arhgap6, Amelx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218C08.bB6Ng01-218C08.g
ACCGA034353GA034354
length1,144915
definitionB6Ng01-218C08.b B6Ng01-218C08.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(164,652,571 - 164,653,723)(128,057,278 - 128,057,385)
sequence
gaattcctattgctttcactgatgtgggaagccacaccaaaaatgtgggt
agcaacttctggtagcagcacaaatggaatagaacatagcataaggagga
gcaattctcctttattctcttggccttctttctttccattaagttgattt
accctgttgctgaaaattatttcaccattacaatcagcacttccaggctc
cactgtcaacaaaagtcaagcagttctctaagaatattcaaggtttgcaa
ggccatgctgggactgctgaggcatgtgagtgctcatgcccacaacagcc
agaggcactggattctctggatcttgagtttcaagctgtccaatacaggt
gctgggaactggctgctggtcttctgcaagagtagcatatattcttattt
ttctttttctttgtcagcctagccttttatggcttagccatctcaccagc
caaagcagtatgcattttaacagctgagacatccttatgacctgtgtatt
agtttcttattgctgctataaagaattaccacatacttggttgtttaatg
caatagtagttaatttcccctcagttatagaagtctaaggtttatacttg
atatcactggaatgaacccaaaatgccaatgacactgtgttgcttgctcc
cagaggctcttggagaatcagtttcaggattctaaaggtcatcggtgtct
tgaagcatggtctactttctctctttaaagcctgtaatatagcaccttca
accccaacctctgtgaatagcctcatctcttcttccctgtatttgccttt
ctgcctcccactcctaaggacctttatgatgacatgaggtccatccaggt
tatccaggataaactcctcatctcagctcataaacttaatcatagtagtg
gcctctttagaatgtaagcatatttactagttctagaattagaaaagcca
cctttgggggttactatcctgtctataccagtcatctcttattgtaggaa
tagagaaaagatagactatgtgattcaccagagcagtattcttttcagaa
agtagcacaaaaattgagacataagacaggctgttattccagccatggtg
ggtatagcagcctgaatagtcatgaaatatttgagactcaatgt

gaattctctttagttatatcctccattttcaattgagttatttggggatt
tgatatctagtttcttgagttcttaatatatttttaatattagtcctcta
tttgatatgtagccattctgtaggctgctgttttctctgattgacagtgg
cctttgccttaaagaagaatttcagtttcatgaggtcccatttattaatt
gttgatcttagtgcctgtactaagatctattctgttcagaaagtcttctc
ttgtggcaatgagatcaaagctattccccaacttctatcagattcagtgt
gtttggccttacattgaggtcttttggagttgagttttgtacagagagat
aattatagatctatttggattctcctatgtgcagccatccagtttgacca
gcaccatttgttgaatatgttgtctttttttctactgtgtatttctgttt
taagaattaggtatcagacatttatggatttgtttctgggttttctattc
aatttgtctgttttcatgccaataacatgctgtttttttattatggtagc
tctgtagtacaatttgagatcagagatggcgatacctccagctattcttt
tattattcagttttttttgtttgttttttttttttttttttgtctttttg
agccaggctttctctacgtggccttagatgtccttgaactcactgtatac
caggctggccccagactcacagagatccatctgcctctgtattctcaagt
gctgaaattaaagatgtgtactatcactgctggtattgttttacctattt
ctcccttcccctctctctttctctgcttccatataaactttaaaatttct
cttttgaatttctctgaaaaatttaatttgaatcaggattgccttgtatt
tgtagatagctttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_164652571_164653723
seq2: B6Ng01-218C08.b_45_1188

seq1  GAATTCCTATTGCTTTCACTGATGTGGGAAGCCACACCAAAAATGTGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTGCTTTCACTGATGTGGGAAGCCACACCAAAAATGTGGGT  50

seq1  AGCAACTTCTGGTAGCAGCACAAATGGAATAGAACATAGCATAAGGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTTCTGGTAGCAGCACAAATGGAATAGAACATAGCATAAGGAGGA  100

seq1  GCAATTCTCCTTTATTCTCTTGGCCTTCTTTCTTTCCATTAAGTTGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTCTCCTTTATTCTCTTGGCCTTCTTTCTTTCCATTAAGTTGATTT  150

seq1  ACCCTGTTGCTGAAAATTATTTCACCATTACAATCAGCACTTCCAGGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTTGCTGAAAATTATTTCACCATTACAATCAGCACTTCCAGGCTC  200

seq1  CACTGTCAACAAAAGTCAAGCAGTTCTCTAAGAATATTCAAGGTTTGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCAACAAAAGTCAAGCAGTTCTCTAAGAATATTCAAGGTTTGCAA  250

seq1  GGCCATGCTGGGACTGCTGAGGCATGTGAGTGCTCATGCCCACAACAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGCTGGGACTGCTGAGGCATGTGAGTGCTCATGCCCACAACAGCC  300

seq1  AGAGGCACTGGATTCTCTGGATCTTGAGTTTCAAGCTGTCCAATACAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCACTGGATTCTCTGGATCTTGAGTTTCAAGCTGTCCAATACAGGT  350

seq1  GCTGGGAACTGGCTGCTGGTCTTCTGCAAGAGTAGCATATATTCTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGAACTGGCTGCTGGTCTTCTGCAAGAGTAGCATATATTCTTATTT  400

seq1  TTCTTTTTCTTTGTCAGCCTAGCCTTTTATGGCTTAGCCATCTCACCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTCTTTGTCAGCCTAGCCTTTTATGGCTTAGCCATCTCACCAGC  450

seq1  CAAAGCAGTATGCATTTTAACAGCTGAGACATCCTTATGACCTGTGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAGTATGCATTTTAACAGCTGAGACATCCTTATGACCTGTGTATT  500

seq1  AGTTTCTTATTGCTGCTATAAAGAATTACCACATACTTGGTTGTTTAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTATTGCTGCTATAAAGAATTACCACATACTTGGTTGTTTAATG  550

seq1  CAATAGTAGTTAATTTCCCCTCAGTTATAGAAGTCTAAGGTTTATACTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTAGTTAATTTCCCCTCAGTTATAGAAGTCTAAGGTTTATACTTG  600

seq1  ATATCACTGGAATGAACCCAAAATGCCAATGACACTGTGTTGCTTGCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACTGGAATGAACCCAAAATGCCAATGACACTGTGTTGCTTGCTCC  650

seq1  CAGAGGCTCTTGGAGAATCAGTTTCAGGATTCTAAAGGTCATCGGTGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCTCTTGGAGAATCAGTTTCAGGATTCTAAAGGTCATCGGTGTCT  700

seq1  TGAAGCATGGTCTACTTTCTCTCTTTAAAGCCTGTAATATAGCACCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCATGGTCTACTTTCTCTCTTTAAAGCCTGTAATATAGCACCTTCA  750

seq1  ACCCCAACCTCTGTGAATAGCCTCATCTCTTCTTCCCTGTATTTGCCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAACCTCTGTGAATAGCCTCATCTCTTCTTCCCTGTATTTGCCTTT  800

seq1  CTGCCTCCCACTCCTAAGGACCTTTATGATGACATGAGGTCCATCCAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCACTCCTAAGGACCTTTATGATGACATGAGGTCCATCCAGGT  850

seq1  TATCCAGGATAAACTCCTCATCTCAGCTCATAAACTTAATCATAGTAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGGATAAACTCCTCATCTCAGCTCATAAACTTAATCATAGTAGTG  900

seq1  GCCTCTTTAGAATGTAAGCATATTTACTAGTTCTAGAATTAGAAAAGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTTAGAATGTAAGCATATTTACTAGTTCTAGAATTAGAAAAGCCA  950

seq1  CCTTTGGGGGTTACTATCCTGTCTATACCAGTCATCTCTTATTGTAGGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGGGGTTACTATCCTGTCTATACCAGTCATCTCTTATTGTAGGAA  1000

seq1  TAGAGAAAAGATAGACTATGTGGATTCACCAGAGCAGTA-TCTTTTCAGA  1049
      ||||||||||||||||||||| ||||||||||||||||| ||||||||| 
seq2  TAGAGAAAAGATAGACTATGT-GATTCACCAGAGCAGTATTCTTTTCAG-  1048

seq1  AAAGTAGCACAAAAATGAGGACAATAAGACAGGCCTGTTATCCCAGGCCA  1099
      ||||||||||||||||   ||| |||||||||| ||||||| ||| ||||
seq2  AAAGTAGCACAAAAATTGAGAC-ATAAGACAGG-CTGTTATTCCA-GCCA  1095

seq1  TGTGGGGTATAGCAAGCCCTGAATAGGTCATGAATATTTTGAGGACTCAG  1149
      ||  ||||||||||   |||||||| ||||||||   ||||| |||||| 
seq2  TGGTGGGTATAGCA--GCCTGAATA-GTCATGAAATATTTGA-GACTCA-  1140

seq1  ATGT  1153
      ||||
seq2  ATGT  1144


seq1: chr10_128057278_128057385
seq2: B6Ng01-218C08.g_676_776

seq1  GTTTTTGTTTGTTTGTTTGTTTTTTTTTTTTTAGTTTTTTTTTTGAGACA  50
      |||||| ||||||||||| ||||||||||||   || | |||||||| ||
seq2  GTTTTT-TTTGTTTGTTTTTTTTTTTTTTTT---TTGTCTTTTTGAGCCA  46

seq1  GGGTTGTTTTTTGTTTGTTTGTTTGTTTGTTTTTATGGCCCTGTAGACCA  100
      || ||  | |  ||    ||   |||     || |   | ||||| ||||
seq2  GGCTTTCTCTACGTGGCCTTAGATGT---CCTTGAACTCACTGTATACCA  93

seq1  GGCTGGCC  108
      ||||||||
seq2  GGCTGGCC  101


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