BAC Information

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BAC

Clone NameB6Ng01-218F12
ChromosomeX (Build37)
Map Location 16,279,420 - 16,280,592
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043949, LOC100043950, Cypt6, LOC100038939, LOC668993, Maoa
Downstream geneMaob, Ndph, LOC100043063, Efhc2, Fundc1, EG278181, EG668994
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218F12.bB6Ng01-218F12.g
ACCGA034499GA034500
length1,178657
definitionB6Ng01-218F12.b B6Ng01-218F12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttaaaatagggttgaaggaccctaagggctttgtccagtccc
acaccctccttacagcttctccttcctgcctggggtcaaggttaggccaa
gttccattctctactcacaggaacattctttagtaaaaaaaattctcaga
atatactaatagtcagctgaccctctggaaagtcccaggtagacttcaaa
tgtgtgtcatacctggtagccaatagatttaaaagtaaatatgcttagcc
aataagtttgaactgaaacctggctgatgtaacccgtgtccctataaagc
atataaactgcttgtaatagccattggggatcactttctcatcacttgct
ttgagggactgattgagggttgaccccaacttccctgaaaataaacctct
tgcttttgcatccatttgcgtctcagtgcctcactcagttggtgtctcac
tcaagtgtgtcttgaagtatcaccaaccaaggtttggggtcttacattgt
cagcctacagagaactagtactctgaagatgggatcctgggtgacagcaa
tgcatggtgactgtagttcaattggtaggtagtaatggttcatcatttta
tatcactgctgttctctgctttctacctatgttctcaacaatggagtttt
ctcaggtctccacttgtcctttatcctggagcagtgacctctcccattct
caggattctactcagagaaggaaggctgtttcactatgttctgtgctcct
acggctcaccatggagcatgctaataaaacatttttcatacgtttgacct
aaaaagtttaggtacactgcttggaaggttaatgagaacgaaaattagac
cagatataggagagccaatgctatgattcaaatatgaaatgtccacccaa
agattcatttttcaaatgccttttccttactttttgggacattgcaaatc
atgtaggagttgggagtctacttgataaatgtaaactgctaatggtaagc
ctttggtagtcttagctcagtctctagttctgacgttttctctgattcct
ggttccaattttacatccaatcttaccacacattccatcaccaggagctc
agccatgctctccacatgatgcccggaaattcccacttaattctgagcaa
aaaaaaatcttttaattccttatattct

gaattctctggtggaatatatacatatatatatatatatatatatatata
tatatatatatatatatatatacttatataaaatataattttatactatc
ttatatatactatcatatcatctgcaaatagtgatattttgacttcttcc
tttccaatttatatccccttgacctcattttgttgtctaattgctctgtc
taggactacaagtaccacattgaataggtaaggagaaagtgggcagcctt
gtctggtcccggattttagtgggattgcttcaagtttctctccacttaat
ttgatgttggcaactaggtttgctgtatattgcttttattatgtttaggt
atgggccttgaattcctgacctttccaagactttttatattgaagggatg
ttggattttgtcaaattctttctcattgtctaatgagatgatcatttggt
ttttgtctttgagtttgtttatatagtggattatgttgatggatttctgt
atattaagggacccctgcatccctgggatgaagcctatttcatcatgatg
gatgagggttttgatgtgttcttggattcggttttcaagaatttttttga
gtaattttgcattgatattcataagggaaattgatctgaatttctctttt
ctttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_16279420_16280592
seq2: B6Ng01-218F12.b_43_1220 (reverse)

seq1  AGAATATAAAGATTT------TTTTTTTTGGCTCAGGATTTTAGTGG--A  42
      ||||||||| || ||      |||||||| ||||| || || |||||  |
seq2  AGAATATAAGGAATTAAAAGATTTTTTTTTGCTCA-GAATTAAGTGGGAA  49

seq1  TTTCCGGGCATCATGGTGGAGAAGGCATGGCTGAGCTCCTGGTGATGGGA  92
      |||||||||||||| |||||||  |||||||||||||||||||||| |||
seq2  TTTCCGGGCATCAT-GTGGAGA--GCATGGCTGAGCTCCTGGTGAT-GGA  95

seq1  ATGTGTGGTAAGATTGGATGTAAAATTGG-ACCAGGAATCAGAGAAAACG  141
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGTGTGGTAAGATTGGATGTAAAATTGGAACCAGGAATCAGAGAAAACG  145

seq1  TCAGAACTAGAGACTGAGCTAAGACTACCAAAGGCTTACCATTAGCAGTT  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACTAGAGACTGAGCTAAGACTACCAAAGGCTTACCATTAGCAGTT  195

seq1  TACATTTATCAAGTAGACT-CCAACTCCTACATGATTTGCAATGTCCCAA  240
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TACATTTATCAAGTAGACTCCCAACTCCTACATGATTTGCAATGTCCCAA  245

seq1  AAAGTAAGGAAAAGGCATTTGAAAAATGAATCTTTGGGTGGACATTTCAT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAGGAAAAGGCATTTGAAAAATGAATCTTTGGGTGGACATTTCAT  295

seq1  ATTTGAATCATAGCATTGGCTCTCCTATATCTGGTCTAATTTTCGTTCTC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATCATAGCATTGGCTCTCCTATATCTGGTCTAATTTTCGTTCTC  345

seq1  ATTAACCTTCCAAGCAGTGTACCTAAACTTTTTAGGTCAAACGTATGAAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCTTCCAAGCAGTGTACCTAAACTTTTTAGGTCAAACGTATGAAA  395

seq1  AATGTTTTATTAGCATGCTCCATGGTGAGCCGTAGGAGCACAGAACATAG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTATTAGCATGCTCCATGGTGAGCCGTAGGAGCACAGAACATAG  445

seq1  TGAAACAGCCTTCCTTCTCTGAGTAGAATCCTGAGAATGGGAGAGGTCAC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAGCCTTCCTTCTCTGAGTAGAATCCTGAGAATGGGAGAGGTCAC  495

seq1  TGCTCCAGGATAAAGGACAAGTGGAGACCTGAGAAAACTCCATTGTTGAG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCAGGATAAAGGACAAGTGGAGACCTGAGAAAACTCCATTGTTGAG  545

seq1  AACATAGGTAGAAAGCAGAGAACAGCAGTGATATAAAATGATGAACCATT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGGTAGAAAGCAGAGAACAGCAGTGATATAAAATGATGAACCATT  595

seq1  ACTACCTACCAATTGAACTACAGTCACCATGCATTGCTGTCACCCAGGAT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCTACCAATTGAACTACAGTCACCATGCATTGCTGTCACCCAGGAT  645

seq1  CCCATCTTCAGAGTACTAGTTCTCTGTAGGCTGACAATGTAAGACCCCAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTTCAGAGTACTAGTTCTCTGTAGGCTGACAATGTAAGACCCCAA  695

seq1  ACCTTGGTTGGTGATACTTCAAGACACACTTGAGTGAGACACCAACTGAG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGTTGGTGATACTTCAAGACACACTTGAGTGAGACACCAACTGAG  745

seq1  TGAGGCACTGAGACGCAAATGGATGCAAAAGCAAGAGGTTTATTTTCAGG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCACTGAGACGCAAATGGATGCAAAAGCAAGAGGTTTATTTTCAGG  795

seq1  GAAGTTGGGGTCAACCCTCAATCAGTCCCTCAAAGCAAGTGATGAGAAAG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGGGGTCAACCCTCAATCAGTCCCTCAAAGCAAGTGATGAGAAAG  845

seq1  TGATCCCCAATGGCTATTACAAGCAGTTTATATGCTTTATAGGGACACGG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCCAATGGCTATTACAAGCAGTTTATATGCTTTATAGGGACACGG  895

seq1  GTTACATCAGCCAGGTTTCAGTTCAAACTTATTGGCTAAGCATATTTACT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATCAGCCAGGTTTCAGTTCAAACTTATTGGCTAAGCATATTTACT  945

seq1  TTTAAATCTATTGGCTACCAGGTATGACACACATTTGAAGTCTACCTGGG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATCTATTGGCTACCAGGTATGACACACATTTGAAGTCTACCTGGG  995

seq1  ACTTTCCAGAGGGTCAGCTGACTATTAGTATATTCTGAGAATTTTTTTTA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCAGAGGGTCAGCTGACTATTAGTATATTCTGAGAATTTTTTTTA  1045

seq1  CTAAAGAATGTTCCTGTGAGTAGAGAATGGAACTTGGCCTAACCTTGACC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAATGTTCCTGTGAGTAGAGAATGGAACTTGGCCTAACCTTGACC  1095

seq1  CCAGGCAGGAAGGAGAAGCTGTAAGGAGGGTGTGGGACTGGACAAAGCCC  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAGGAAGGAGAAGCTGTAAGGAGGGTGTGGGACTGGACAAAGCCC  1145

seq1  TTAGGGTCCTTCAACCCTATTTTAACAGAATTC  1173
      |||||||||||||||||||||||||||||||||
seq2  TTAGGGTCCTTCAACCCTATTTTAACAGAATTC  1178


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