MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-218P07
Chromosome	X (Build37)
Map Location	158,725,166 - 158,726,072
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Prkaca-ps1, Rai2, Gm47, Nhs
Downstream gene	Reps2, LOC654358, LOC100041557, LOC667630, Rbbp7, 4932441K18Rik, LOC671250, Syap1, LOC100041607, Ctps2, S100g, LOC100040610
Link	Open Mouse BAC browser

Click to get alignment info.

name	Prkaca-ps1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:237188
definition	note : protein kinase, cAMP dependent, catalytic, alpha pseudogene 1 pseudo : _no_value

name	Rai2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24004 MGI:1344378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm47 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:195726 MGI:2684893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Nhs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:195727 MGI:2684894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Reps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194590 MGI:2663511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC654358 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654358
definition	note : ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene pseudo : _no_value

name	LOC100041557 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041557
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC667630 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667630
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Rbbp7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245688 MGI:1194910
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4932441K18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353170 MGI:3590652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671250 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Syap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67043 MGI:1914293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041607 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041607
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ctps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55936 MGI:1933185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12309 MGI:104528
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040610 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Rai2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803061 GeneID:24004 MGI:1344378
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoic acid induced 2 transcript_id : NM_198409.2

name	Gm47 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83004682 GeneID:195726 MGI:2684893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : gene model 47, (NCBI) transcript_id : XM_112125.5

name	Nhs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486677 GeneID:195727 MGI:2684894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Nance-Horan syndrome (human) transcript_id : NM_001081052.1

name	Reps2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84490400 GeneID:194590 MGI:2663511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RALBP1 associated Eps domain containing protein 2 transcript_id : NM_178256.3

name	Rbbp7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982058 GeneID:245688 MGI:1194910
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoblastoma binding protein 7 transcript_id : NM_009031.2

name	4932441K18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369021 GeneID:353170 MGI:3590652
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932441K18 gene transcript_id : NM_178935.3

name	Syap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385423 GeneID:67043 MGI:1914293
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synapse associated protein 1 transcript_id : NM_025932.1

name	Ctps2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377114 GeneID:55936 MGI:1933185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytidine 5'-triphosphate synthase 2 transcript_id : NM_018737.3

name	S100g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83816950 GeneID:12309 MGI:104528
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein G transcript_id : NM_009789.2

name	Rai2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38259196 CCDS:CCDS30507.1 GeneID:24004 MGI:1344378
definition	codon_start : 1 exception : mismatches in translation product : retinoic acid induced 2 protein_id : NP_940801.1

name	Gm47 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83004683 GeneID:195726 MGI:2684893
definition	codon_start : 1 product : hypothetical protein LOC195726 protein_id : XP_112125.5

name	Nhs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486678 GeneID:195727 MGI:2684894
definition	codon_start : 1 product : Nance-Horan syndrome protein_id : NP_001074521.1

name	Reps2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84490401 CCDS:CCDS30508.1 GeneID:194590 MGI:2663511
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : RALBP1-associated Eps domain containing protein 2 product : RalBP1 associated Eps domain containing protein 2 protein_id : NP_839987.2

name	Rbbp7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982059 CCDS:CCDS30509.1 GeneID:245688 MGI:1194910
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0016581 - NuRD complex [Evidence IDA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006338 - chromatin remodeling [Evidence TAS]; GO:0006260 - DNA replication [Evidence IEA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : G1/S transition control protein-binding protein; histone acetyltransferase type B subunit 2 product : retinoblastoma binding protein 7 protein_id : NP_033057.2

name	4932441K18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725808 CCDS:CCDS30510.1 GeneID:353170 MGI:3590652
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA] codon_start : 1 note : lipopolysaccharide-specific response protein 5; factor inhibiting activating transcription factor 4 (ATF4)-mediated transcription product : gamma-taxilin protein_id : NP_849266.1

name	Syap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385424 CCDS:CCDS30511.1 GeneID:67043 MGI:1914293
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 exception : mismatches in translation product : synapse associated protein 1 protein_id : NP_080208.1

name	Ctps2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055198 GeneID:55936 MGI:1933185
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0006541 - glutamine metabolism [Evidence IEA] codon_start : 1 note : CTP synthetase homolog product : cytidine triphosphate synthase II protein_id : NP_061207.1

name	S100g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106263 GeneID:12309 MGI:104528
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005499 - vitamin D binding [Evidence IEA] codon_start : 1 note : calbindin-D9K; calbindin 3, (vitamin D-dependent calcium binding protein); calbindin D9k; calbindin-D9K major form; cytidine 5'-triphosphate synthase 2 product : S100 calcium binding protein G protein_id : NP_033919.1

name	LOC100041557 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041557
definition	number : 1 pseudo : _no_value

name	LOC667630 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667630
definition	number : 1 pseudo : _no_value

name	LOC671250 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671250
definition	number : 1 pseudo : _no_value

name	LOC671250 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671250
definition	number : 2 pseudo : _no_value

name	LOC671250 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671250
definition	number : 3 pseudo : _no_value

name	LOC100041607 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041607
definition	number : 1 pseudo : _no_value

name	LOC100040610 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040610
definition	number : 1 pseudo : _no_value

clone name	MSMg01-302L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320B17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-218P07.b	B6Ng01-218P07.g
ACC	GA034941	GA034942
length	1,131	1,063
definition	B6Ng01-218P07.b	B6Ng01-218P07.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcatcatttttaatagctgagtagtagtccattgtgtaaatgtacc acattttctgtatccattcctatgttggaggacatctaggttattttcag cttcttgctactgtaaataaggctgctatgaacatagtgaagcatgtgtc cttattacatgttggagcatattctgggtatatgcccaggattggtatag ctgggtcctcaggtaatactatgtccagttttttgaggaactgccaaact gatttccagagtggttgtaccagcttgcaatcccaccagcaacagaggag tgttcccctttctccacatcctcgacagcatttgctgtcatctgagtttt tgatcttagccattctgacaggtgtgaggtagaatcttatgtttgttttg atttgcattttcctgatgattaaggatgttgaacatttctttaggtgctt ctcagccattcagtattcctcagttgagaattatttgtttagctctgtgt cccattttcaatagggttatttggttctctggagcctaacttcttgagtt cttattggatattagccctctattggatgtagggttggtaaagatctttt cccaatctgttggttgccattttgttctattgacagtgtcctttgcctac agaagctttgcaattttatgaggtcccatttgtcaattcttgatcttaga gcataagctattgatgttcttctgtccaggaaaatttccccagtgcccat gtgctccaggctcttccccactttcttttctattagtttcagtgtatctg gttttatgtggaggtccttgatccacttggacttgagttttgtataagga gataaaaatggatcattttgcattcttctacatgataactgccagttgaa gcagcaccatttgttgacaatgctgtcttttttccactggatggttttag atcccttgtcaaagatcaagtgaccattaggtatgtgggttcatttctgg gtcttcaatctattttattgatctcttgcttgcaactgtaccagtaccat gcaagtttttatcacatgctcctgtagtacaggtcaggtcaagggatgtg tgattccacaaagttcttttgtttgtaccag	gaattccctctcaccaatgttgggcatttcatctaagatccctccctttg agtcctgaaagtctctccctctcaggtctctggtacattctagagaatct ccccacctctcatccccaggcgctgcatatttccattcattccacctcat gggaggacaccaaggcctgccactattactgatgctatgatgtgcttaca ggcaggagactagtatggtcatgctcttagaggcccaaccagcagctgac tgagacatgtgtagatacttacacccaaccattggactgaagtcaggaac ccctatgcttgaattaggagaaggactgaagaagctgaaagggaaagggg tcccataggaagaccagcagactcaactaacccagaccccagagagctcc cagagacagagccaccaaccagacagcatacaccaactggtctgaggccc ctgacacatatacagccaaggactgcctagtctggactcagtgagagaag atgtgcctaatcctggagagacccgaggccccagggagtgagaagccctg gttgaggggagcattctctcagagacaggggaaggaggaatgggatgagg aactgtgggaggggaaccaggaacgggcaatggctggaacgtaaatattt ttttaaaaaaagaatttaagcaaacactaaattgagcctcaaagggagag gggactcaaggaaaggaataaagaaaaaaatgagggtgataaatatcacc caaacttagtcatgggagaaacaaaaagaaaacatatcattgttcatttt tatacccacatgtgcactgtcacatttacccccctttttttactagccta gagactgatgtctggcttttggttgtgtgtatacaagccgagaagctgta atgtgtgggttactctaagagtatatgacttaggctagtacttggtccca gtaggaaaatgaacgctttaatgttgaccaatattagacataccttggga gctccttttggggatcttgtcacacactgggtctaggcatttcaacaggg ttcattgtactaa
quality values	Open. Hide. 34 17 29 35 54 31 24 47 41 42 62 62 62 62 31 56 54 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 59 59 44 56 62 49 38 49 59 62 62 62 59 59 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 54 54 54 62 59 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 62 62 54 62 62 62 59 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 54 54 54 62 62 62 62 62 62 62 49 54 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 59 62 54 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 59 49 44 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 58 58 58 52 58 58 58 54 58 54 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 47 58 54 58 41 58 58 54 58 58 54 51 58 58 58 54 58 54 58 58 58 58 58 52 58 52 52 58 58 58 58 58 43 58 58 46 48 58 58 49 50 50 54 58 58 58 58 58 54 51 49 51 49 58 58 54 46 54 49 50 58 51 58 47 58 58 58 54 54 51 58 50 50 35 46 58 58 46 58 58 58 51 58 52 52 51 49 58 58 47 52 42 54 58 25 44 50 49 43 40 50 50 58 54 58 50 41 32 50 39 43 42 42 53 51 46 38 53 51 58 54 41 51 37 52 50 42 42 58 31 51 39 52 42 52 54 39 33 53 31 26 42 40 53 53 52 49 38 42 35 32 32 50 49 44 44 17 39 39 53 32 49 49 42 42 49 29 51 42 44 36 37 50 51 51 47 51 51 42 42 37 27 54 42 53 46 35 45 37 54 54 31 33 52 54 54 44 42 42 54 54 26 33 28 37 40 21 41 31 45 53 45 32 33 26 32 47 33 32 40 52 40 44 46 16 51 53 32 52 32 47 33 33 32 46 21 37 29 18 47 37 53 42 31 33 34 36 18 32 37 51 51 29 14 9 30 46 45 33 28 30 51 51 42 51 23 26 33 25 42 25 29 32 39 43 25 37 46 46 51 43 32 46 46 18 14 22 31 31 46 46 27 31 34 26 31 34 42 31 31 42 29 32 36 31 26 31 32 13 29 27 37 32 42 15 28 32 32 33 31 27 32 28 35 34 20 12 31 31 28 21 14 29 31 33 29 23 25 35 31 18 31 21 24 32 26 38 36 22 31 22 48 48 46 32 25 21 31 14 24 25 31 28 11 10 31 44 26 41 44 8 26 20 33 34 32 44 26 13 25 38 10 23 31 44 36 11 11 19 27 21 22 31 27 32 21 5 7 10 16 6 7 11 32 21 8 22 32 27 33 40 6 5 15 10 10 22 47 26 32 11 22 36 29 8 21 21 32 15 21 8 15 11 9 11 7 8 31 9 8 13 25 34 15 16 29 43 11 12 12 6 7 6 9 7 3 4 9 8 6 6 6 7 16 16 16 5 6 8 11 13 10 6 20 16 14 6 6 27 38 38 38 21 14 14 6 4 7 20 8 5 5 17 17 14 12 9 5 16 7 7 7 7 10 9 4 3 3 14 14 25 5 7 5 4 11 23 8 12 7 25 9 16 8 16 9 9 8 22 9 6 13 4 20 11 21 5 9 6 4 25 6 7 15 10 5 3 3 3 3 8 5 12 4	Open. Hide. 62 49 51 47 62 62 62 62 62 62 62 44 51 62 47 44 62 62 62 62 62 62 62 59 62 62 59 62 62 59 59 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 56 62 62 62 62 56 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 52 42 46 62 62 62 62 46 62 62 62 62 62 52 47 62 54 47 48 62 62 62 43 62 62 52 44 62 62 62 62 54 62 62 62 62 33 62 62 58 58 48 58 39 42 58 54 58 58 54 54 52 46 58 41 45 54 52 58 58 58 58 58 54 39 58 54 42 58 58 52 41 58 58 58 42 41 58 58 40 58 54 52 52 54 58 52 58 58 58 54 33 38 41 52 52 24 24 52 52 40 52 58 37 39 52 47 52 50 54 54 46 58 58 52 54 58 49 52 54 54 52 43 52 52 52 42 53 42 58 58 41 49 58 32 15 49 50 48 47 50 52 52 58 24 38 58 18 21 49 50 41 34 46 47 41 42 50 48 30 41 30 25 45 49 48 40 49 48 51 53 48 34 30 51 58 58 51 34 39 16 46 48 49 19 16 52 43 42 25 37 49 12 58 27 41 58 46 52 49 35 49 50 37 52 58 50 50 44 44 41 42 51 19 6 44 41 42 52 52 41 31 58 54 53 24 39 50 35 39 58 50 39 42 39 40 41 52 50 28 40 39 15 37 13 49 22 41 15 25 52 25 13 34 42 54 54 51 20 16 54 50 50 41 35 49 32 41 33 33 49 38 29 12 32 32 28 32 44 49 54 33 32 37 24 51 51 39 31 45 37 29 24 17 25 31 39 39 27 44 17 41 20 34 29 41 48 35 31 30 54 54 54 52 32 48 53 53 53 47 46 33 26 40 35 53 24 40 25 21 41 23 41 17 32 22 29 31 30 26 34 31 36 30 26 38 12 31 51 31 13 9 25 8 45 33 29 40 15 24 21 25 34 15 18 22 33 9 16 30 24 38 21 20 20 6 15 28 33 19 31 21 6 32 18 31 31 42 42 42 19 25 24 31 16 18 21 14 9 5 20 14 31 31 10 12 31 31 17 16 29 19 26 11 20 28 35 26 29 20 30 25 14 41 21 23 32 31 37 30 27 10 12 20 24 31 31 13 13 9 6 9 13 7 4 11 12 14 46 24 28 9 5 17 6 31 11 19 11 7 16 26 31 8 20 34 23 15 29 21 11 7 19 6 8 32 25 36 30 18 6 14 6 12 9 38 14 42 34 13 18 24 39 14 14 13 24 9 12 22 6 31 6 18 8 12 18 24 10 19 36 10 20 30 10 9 6 9 13 10 11 32 20 8 10 6 6 16 13 21 12 4 5 7 19 5 3 3 3 4 18 10 9 6

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_158725166_158726072
seq2: B6Ng01-218P07.g_209_1126

seq1  CTCATGGGAGGACACCAAGGCCTGCCACTATTACTGATGCTATGATGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGGAGGACACCAAGGCCTGCCACTATTACTGATGCTATGATGTGC  50

seq1  TTACAGGCAGGAGACTAGTATGGTCATGCTCTTAGAGGCCCAACCAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGCAGGAGACTAGTATGGTCATGCTCTTAGAGGCCCAACCAGCAG  100

seq1  CTGACTGAGACATGTGTAGATACTTACACCCAACCATTGGACTGAAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGAGACATGTGTAGATACTTACACCCAACCATTGGACTGAAGTCA  150

seq1  GGAACCCCTATGCTTGAATTAGGAGAAGGACTGAAGAAGCTGAAAGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCCCTATGCTTGAATTAGGAGAAGGACTGAAGAAGCTGAAAGGGAA  200

seq1  AGGGGTCCCATAGGAAGACCAGCAGACTCAACTAACCCAGACCCCAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCCCATAGGAAGACCAGCAGACTCAACTAACCCAGACCCCAGAGA  250

seq1  GCTCCCAGAGACAGAGCCACCAACCAGACAGCATACACCAACTGGTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAGAGACAGAGCCACCAACCAGACAGCATACACCAACTGGTCTGA  300

seq1  GGCCCCTGACACATATACAGCCAAGGACTGCCTAGTCTGGACTCAGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCTGACACATATACAGCCAAGGACTGCCTAGTCTGGACTCAGTGAG  350

seq1  AGAAGATGTGCCTAATCCTGGAGAGACCCGAGGCCCCAGGGAGTGAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGTGCCTAATCCTGGAGAGACCCGAGGCCCCAGGGAGTGAGAAG  400

seq1  CCCTGGTTGAGGGGAGCATTCTCTCAGAGACAGGGGAAGGAGGAATGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTTGAGGGGAGCATTCTCTCAGAGACAGGGGAAGGAGGAATGGGA  450

seq1  TGAGGAACTGTGGGAGGGGAACCAGGAACGGGCAATGGCTGGAACGTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAACTGTGGGAGGGGAACCAGGAACGGGCAATGGCTGGAACGTAAA  500

seq1  TATTTTTTTAAAAAAAGAATTTAAGCAAACACTAAATTGAGCCTCAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTAAAAAAAGAATTTAAGCAAACACTAAATTGAGCCTCAAAGG  550

seq1  GAGAGGGGACTCAAGG-AAGGAATAAAGAAAAAAATGA-GGTGATAAATA  598
      |||||||||||||||| ||||||||||||||||||||| |||||||||||
seq2  GAGAGGGGACTCAAGGAAAGGAATAAAGAAAAAAATGAGGGTGATAAATA  600

seq1  TCACCCAAACTTAGTCAT-GGAG-AACAAAAAGAAAACATATCATTGTTC  646
      |||||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  TCACCCAAACTTAGTCATGGGAGAAACAAAAAGAAAACATATCATTGTTC  650

seq1  ATTTTTATACCCACATGTGCACTGTCACATTTACCCCCCTTTTTTTACTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATACCCACATGTGCACTGTCACATTTACCCCCCTTTTTTTACTA  700

seq1  GCCTAGAGACTGATGTCTGGC-TTTGGTTGTGTGTATACAAGCCGAGAAG  745
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCCTAGAGACTGATGTCTGGCTTTTGGTTGTGTGTATACAAGCCGAGAAG  750

seq1  CTGTAATGTGTGGGTTACTCTAAGAGTATATGACTTAGGCTAGTACTT-G  794
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTGTAATGTGTGGGTTACTCTAAGAGTATATGACTTAGGCTAGTACTTGG  800

seq1  TCCCAGTAGGAGAA--GACGCTTTAATGTTGA-CAATATTAGACAATACT  841
      ||||||||||| ||   ||||||||||||||| ||||||||||||   ||
seq2  TCCCAGTAGGAAAATGAACGCTTTAATGTTGACCAATATTAGACATACCT  850

seq1  TGGGGGCTCC-TTTGGGGATCCTGCCACACACT-GGTCTAAGCATTTC-A  888
      |||| ||||| |||||||||| || |||||||| |||||| ||||||| |
seq2  TGGGAGCTCCTTTTGGGGATCTTGTCACACACTGGGTCTAGGCATTTCAA  900

seq1  CAGGGTTAATTTGTACTAA  907
      ||||||| | |||||||||
seq2  CAGGGTTCA-TTGTACTAA  918

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information