MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-223B08
Chromosome	13 (Build37)	X (Build37)
Map Location	119,636,360 - 119,637,375	36,720,788 - 36,721,262
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Hcn1, LOC100041695, LOC674926, Mrps30, LOC668309, LOC100041278, Fgf10
Downstream gene	LOC100041298, LOC100041757, Nnt, Paip1, LOC100041802, 4833420G17Rik, 3110070M22Rik, EG633640
Link	Open Mouse BAC browser

Click to get alignment info.

name	Hcn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15165 MGI:1096392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041695 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC674926 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Mrps30 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59054 MGI:1926237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668309 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668309
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100041278 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs

name	Fgf10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14165 MGI:1099809
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041298 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041298
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100041757 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Nnt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18115 MGI:109279
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Paip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218693 MGI:2384993
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041802 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs

name	4833420G17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67392 MGI:1914642
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110070M22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67304 MGI:1914554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG633640 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:633640 MGI:3648543
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hcn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754167 GeneID:15165 MGI:1096392
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hyperpolarization-activated, cyclic nucleotide-gated K+ 1 transcript_id : NM_010408.1

name	LOC100041695 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264719 GeneID:100041695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100041695 transcript_id : XM_001477417.1

name	Mrps30 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370796 GeneID:59054 MGI:1926237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein S30 transcript_id : NM_021556.3

name	LOC100041278 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264708 GeneID:100041278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs product : hypothetical protein LOC100041278 transcript_id : XM_001476088.1

name	Fgf10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328438 GeneID:14165 MGI:1099809
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor 10 transcript_id : NM_008002.3

name	LOC100041757 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264721 GeneID:100041757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041757 transcript_id : XM_001477472.1

name	Nnt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347945 GeneID:18115 MGI:109279
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nicotinamide nucleotide transhydrogenase transcript_id : NM_008710.3

name	Paip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119943126 GeneID:218693 MGI:2384993
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polyadenylate binding protein-interacting protein 1 transcript_id : NM_001079849.1

name	Paip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119943134 GeneID:218693 MGI:2384993
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polyadenylate binding protein-interacting protein 1 transcript_id : NM_145457.3

name	LOC100041802 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264723 GeneID:100041802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs product : hypothetical protein LOC100041802 transcript_id : XM_001477602.1

name	4833420G17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254364 GeneID:67392 MGI:1914642
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4833420G17 gene transcript_id : NM_026127.3

name	3110070M22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347265 GeneID:67304 MGI:1914554
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110070M22 gene transcript_id : NM_026084.2

name	EG633640 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369471 GeneID:633640 MGI:3648543
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG633640 transcript_id : NM_001039244.2

name	Hcn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754168 CCDS:CCDS26793.1 GeneID:15165 MGI:1096392
definition	GO_component : GO:0030424 - axon [Evidence IDA] GO_function : GO:0030552 - cAMP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005272 - sodium channel activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hyperpolarization-activated, cyclic nucleotide-gated K+ 1 protein_id : NP_034538.1

name	LOC100041695 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264720 GeneID:100041695
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477467.1

name	Mrps30 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789128 CCDS:CCDS26794.1 GeneID:59054 MGI:1926237
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : programmed cell death 9 product : mitochondrial ribosomal protein S30 protein_id : NP_067531.1

name	LOC100041278 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264709 GeneID:100041278
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476138.1

name	Fgf10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106313 CCDS:CCDS26795.1 GeneID:14165 MGI:1099809
definition	GO_component : GO:0009986 - cell surface [Evidence NAS]; GO:0005615 - extracellular space [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0042056 - chemoattractant activity [Evidence IDA]; GO:0005104 - fibroblast growth factor receptor binding [Evidence IDA] [Evidence TAS]; GO:0008083 - growth factor activity [Evidence IDA] [Evidence IEA]; GO:0008201 - heparin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IDA] GO_process : GO:0048754 - branching morphogenesis of a tube [Evidence IDA]; GO:0007267 - cell-cell signaling [Evidence IMP] [Evidence IDA]; GO:0006935 - chemotaxis [Evidence IDA]; GO:0030326 - embryonic limb morphogenesis [Evidence NAS]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence TAS] [Evidence NAS]; GO:0001759 - induction of an organ [Evidence IGI]; GO:0042472 - inner ear morphogenesis [Evidence IGI]; GO:0030324 - lung development [Evidence IDA]; GO:0045596 - negative regulation of cell differentiation [Evidence IDA]; GO:0008285 - negative regulation of cell proliferation [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IMP] [Evidence IDA]; GO:0008284 - positive regulation of cell proliferation [Evidence IDA]; GO:0050679 - positive regulation of epithelial cell proliferation [Evidence IDA]; GO:0048260 - positive regulation of receptor mediated endocytosis [Evidence NAS]; GO:0050677 - positive regulation of urothelial cell proliferation [Evidence IDA]; GO:0000060 - protein import into nucleus, translocation [Evidence NAS]; GO:0045449 - regulation of transcription [Evidence NAS]; GO:0006950 - response to stress [Evidence NAS] codon_start : 1 product : fibroblast growth factor 10 protein_id : NP_032028.1

name	LOC100041757 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264722 GeneID:100041757
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477522.1

name	Nnt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543330 GeneID:18115 MGI:109279
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0008746 - NAD(P) transhydrogenase activity [Evidence IEA]; GO:0008750 - NAD(P)+ transhydrogenase (AB-specific) activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : nicotinamide nucleotide transhydrogenase protein_id : NP_032736.2

name	Paip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703908 CCDS:CCDS26796.1 GeneID:218693 MGI:2384993
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : poly(A) binding protein interacting protein 1 isoform 1 protein_id : NP_663432.1

name	Paip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119943127 GeneID:218693 MGI:2384993
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : poly(A) binding protein interacting protein 1 isoform 2 protein_id : NP_001073318.1

name	LOC100041802 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264724 GeneID:100041802
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477652.1

name	4833420G17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254365 GeneID:67392 MGI:1914642
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC67392 protein_id : NP_080403.3

name	3110070M22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385582 GeneID:67304 MGI:1914554
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC67304 protein_id : NP_080360.1

name	EG633640 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85986653 CCDS:CCDS26799.1 GeneID:633640 MGI:3648543
definition	codon_start : 1 product : hypothetical protein LOC633640 protein_id : NP_001034333.1

name	LOC674926 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674926
definition	number : 1 pseudo : _no_value

name	LOC674926 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674926
definition	number : 2 pseudo : _no_value

name	LOC674926 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674926
definition	number : 3 pseudo : _no_value

name	LOC668309 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668309
definition	number : 2 pseudo : _no_value

name	LOC668309 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668309
definition	number : 1 pseudo : _no_value

name	LOC100041298 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041298
definition	number : 1 pseudo : _no_value

name	LOC100041298 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041298
definition	number : 2 pseudo : _no_value

clone name	MSMg01-511E17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-412P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517P24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-414C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111F11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-334H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-522O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262K16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-223B08.b	B6Ng01-223B08.g
ACC	GA037925	GA037926
length	1,044	735
definition	B6Ng01-223B08.b	B6Ng01-223B08.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(119,636,360 - 119,637,375)	(36,720,788 - 36,721,262)
sequence	gaattctcaagagaaatgaaatttttgcagccacatttaacaatttaaac caattgattcctaaatgatcactaacttcttgatagatgacattttatat tattaaaattgattctattttacacactcattatcataaatgtttcaact ctaccaaacattaacttcaaagatgtttgtggaaaaaaatttttttttca aaaataaatacctaaggagggcaagtttcaaagtcatacatgaagttacc ttgacattgcaccaaagccttgagtagaaatttgagtccttttttttgta tttttgtcatagtttagattacacccagctctgtgttattgactaaatac ctcctaaagatttgtcttctgtgtcacaatattgtgaatcacacaattgg caaatactttggattctttggcttttcttccatttaagcacaaaaaaaaa aaaatcagtcttactgaatgtgcattctgaaaacttatttaccaaagttg aaagaggccttttttgaaaaggaacattgtaagaagagccagaggtgata tagatgactccagtgacatagtgtcttccagacacatgaggactgataca catatgaaggcacagagacagtggcaatacacacaagacctgcatatgcc catgccagaaggcgatgcagatcttagaggggtaatagaagaggacttcc acccctaaacaaaaaactatctgcaattgatacactctaggcaaagaaaa ggtcaggttttcctcaatggaatcttagtatatcaaccatacttttaggc aggctccatgcctgagagtagttggccaacataaaacaaattcaatgcta tttttgtagaccttttctctgattttgctttgcttgggcatatgttttgt cttactggtctctgtttgtttatttatttgatttgtttctgtgaactctc tgtctgtctgtctgtctgtctgtctgtctttggtggtgtgttctcttttc tgttattttggtttgttttgattttttaaagaagacaccataca	gaattcctgatctttccaagacttttatcatgaatggttgttggatcttg tcgaatgctttttccgcatataacgagatgatcatgtggttttgtctttg agtttgtttatataatggattacgttgatggatttccatatattaaacca tccctgcatccctgtaataaagcctacttggtaaggatggatgatcgctt taatgtgttcttgaattcagttagtgagaattttattgagtatttttgca tcgatattcataagggaaactggtctgaagttctctatctttgttggatc tttatgtggtttaggtatcagagtaattgtggcttcatagaatgagttgg gtagagtaccttctacttctattttgtggaatagtttgtgcagaactgga attagatcttctctgaaggtgtagtagaactgtgcactaaagccacctgg tcctgggcttttttttttttttttttttttttttttttttttttttttgg gtgggagactattaatgactgcttctatttctttaggggatatgggactg tttaaatcattaacttgatcctgattaactttggtatctggtatctgtct agaaatttgaccatttcgtccaggttttccagttttgttgagtatagtct tttgtaaaaagaactgatggtgttttggatttcctcagcatccttttgtt atttctccctttttatttctgatttttggtaatta
quality values	Open. Hide. 58 36 17 16 58 40 54 34 30 28 54 62 54 47 62 24 23 49 62 62 32 47 62 62 62 54 47 62 47 54 62 49 51 15 14 10 11 11 11 25 17 19 22 18 18 13 13 13 29 50 59 59 62 62 62 62 59 59 62 62 62 59 62 62 54 54 62 59 59 59 62 59 59 62 54 62 62 43 34 30 25 28 30 34 43 31 46 35 48 40 35 27 40 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 56 56 62 49 49 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 52 52 58 35 58 58 58 45 39 54 54 58 54 58 54 58 58 58 58 58 58 48 54 52 58 45 49 54 54 58 54 54 58 54 58 58 58 58 47 46 42 58 46 52 54 42 58 58 54 42 58 54 48 58 58 54 54 54 54 54 58 52 58 52 54 58 58 58 51 58 54 51 58 58 58 58 42 42 53 40 58 53 58 58 50 58 50 49 53 58 53 53 53 53 41 58 50 51 31 58 51 54 49 42 48 50 41 46 50 58 58 46 48 54 50 53 50 46 58 39 25 58 29 46 58 35 50 50 35 35 48 37 53 53 50 49 28 52 35 58 58 58 37 50 43 40 50 50 58 51 39 53 33 49 38 26 50 52 50 43 32 54 51 50 41 41 42 58 52 50 32 58 58 54 54 41 29 41 39 43 52 52 47 35 25 29 31 41 52 39 32 39 52 30 40 54 53 39 33 17 54 35 31 54 42 34 53 54 54 40 13 33 21 45 33 14 33 18 54 54 31 53 37 42 40 31 25 38 47 37 38 52 42 53 37 32 52 28 40 28 31 31 42 37 29 22 45 46 34 45 30 32 29 53 53 53 45 32 46 29 33 17 40 23 36 31 42 29 40 45 33 32 32 34 34 14 45 28 34 34 31 43 38 41 38 23 45 24 37 30 22 33 28 51 51 31 38 28 51 42 33 37 25 15 22 22 37 31 36 25 38 51 51 51 37 43 31 31 18 36 18 41 26 47 47 19 31 32 31 26 32 29 11 48 46 37 32 26 31 46 31 31 31 21 29 31 48 38 32 35 29 25 30 44 31 48 46 23 39 18 33 25 14 26 31 28 37 48 24 37 25 31 24 35 14 33 16 32 21 46 32 31 19 43 21 13 22 48 28 25 37 26 48 26 44 25 44 21 38 14 38 11 31 21 19 31 26 44 18 38 11 48 8 38 11 44 10 44 9 44 7 29 8 44 12 31 8 16 5 16 8 43 5 34 10 31 5 27 6 28 19 4 4 5 4 4 4 12 6 22 5 6 9 7 9 8 11 28 9 7 5 7 14 7 25 21 32 24 5 6 15 6 25 15 27 25 34 29 4 3 5 7 28 38 34 21 27 15 33 18 21 30 4 7 27 16 27 17 20 6 12 20 28 20	Open. Hide. 62 59 59 47 62 62 62 62 62 59 59 16 15 13 10 23 17 12 17 10 24 12 13 13 18 12 19 62 54 59 62 62 59 62 59 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 46 24 24 24 30 34 34 28 28 27 34 34 28 27 48 38 59 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 59 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 54 62 62 62 54 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 54 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 56 36 41 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 39 43 52 47 47 47 40 52 52 42 47 47 47 47 41 46 52 42 41 31 32 27 24 25 29 31 28 42 42 35 34 42 37 34 34 27 29 29 17 31 41 18 33 42 25 18 16 9 16 9 12 16 12 25 17 27 13 20 18 11 12 19 13 13 26 29 19 25 27 33 33 29 29 30 33 20 19 32 32 27 20 13 15 13 19 31 27 27 18 13 23 12 21 17 18 37 36 19 27 26 26 25 25 29 20 20 28 27 19 25 29 37 18 19 20 9 15 9 21 29 23 28 28 25 32 10 19 17 18 14 21 29 10 18 21 24 29 34 9 19 13 21 14 27 25 23 28 29 27 23 23 16 19 18 19 30 20 27 10 14 16 25 17 14 19 13 36 27 15 15 28 16 19 9 19 35 27 27 18 21 15 25 16 9 6 10 15 12 9 16 18 36 37 31 26 10 17 7 21 23 9 27 23 7 13 13 11 24 6 19 29 11 16 9 21 19 34 37 21 23 19 13 18 14 7 14 9 10 11 18 10 9 9 6 30 47 19 13 15 7 14 13 8 6 9 12 11 22 52 33 9 37 18 17 9 9 10 13 40 24 29 22 18 6 13 25 13 13 14 11 10 9 16 11 6 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_119636360_119637375
seq2: B6Ng01-223B08.b_43_1051

seq1  GAATTCTCAAGAGAAATGAAATTTTTGCAGCCACATTTAACAATTTAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAGAGAAATGAAATTTTTGCAGCCACATTTAACAATTTAAAC  50

seq1  CAATTGATTCCTAAATGATCACTAACTTCTTGATAGATGACATTTTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGATTCCTAAATGATCACTAACTTCTTGATAGATGACATTTTATAT  100

seq1  TATTAAAATTGATTCTATTTTACACACTCATTATCATAAATGTTTCAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATTGATTCTATTTTACACACTCATTATCATAAATGTTTCAACT  150

seq1  CTACCAAACATTAACTTCAAAGATGTTTGTGGAAAAAAATTTTTTTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAAACATTAACTTCAAAGATGTTTGTGGAAAAAAATTTTTTTTTCA  200

seq1  AAAATAAATACCTAAGGAGGGCAAGTTTCAAAGTCATACATGAAGTTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATACCTAAGGAGGGCAAGTTTCAAAGTCATACATGAAGTTACC  250

seq1  TTGACATTGCACCAAAGCCTTGAGTAGAAATTTGAGTCCTTTTTTTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTGCACCAAAGCCTTGAGTAGAAATTTGAGTCCTTTTTTTTGTA  300

seq1  TTTTTGTCATAGTTTAGATTACACCCAGCTCTGTGTTATTGACTAAATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCATAGTTTAGATTACACCCAGCTCTGTGTTATTGACTAAATAC  350

seq1  CTCCTAAAGATTTGTCTTCTGTGTCACAATATTGTGAATCACACAATTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAAAGATTTGTCTTCTGTGTCACAATATTGTGAATCACACAATTGG  400

seq1  CAAATACTTTGGATTCTTTGGCTTTTCTTCCATTTAAGCACAAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTTTGGATTCTTTGGCTTTTCTTCCATTTAAGCACAAAAAAAAA  450

seq1  AAAATCAGTCTTACTGAATGTGCATTCTGAAAACTTATTTACCAAAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGTCTTACTGAATGTGCATTCTGAAAACTTATTTACCAAAGTTG  500

seq1  AAAGAGGCCTTTTTTGAAAAGGAACATTGTAAGAAGAGCCAGAGGTGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGCCTTTTTTGAAAAGGAACATTGTAAGAAGAGCCAGAGGTGATA  550

seq1  TAGATGACTCCAGTGACATAGTGTCTTCCAGACACATGAGGACTGATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGACTCCAGTGACATAGTGTCTTCCAGACACATGAGGACTGATACA  600

seq1  CATATGAAGGCACAGAGACAGTGGCAATACACACAAGACCTGCATATGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAAGGCACAGAGACAGTGGCAATACACACAAGACCTGCATATGCC  650

seq1  CATGCCAGAAGGCGATGCAGATCTTAGAGGGGTAATAGAAGAGGACTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAGAAGGCGATGCAGATCTTAGAGGGGTAATAGAAGAGGACTTCC  700

seq1  ACCCCTAAACAAAAAACTATCTGCAATTGATACACTCTAGGCAAAGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTAAACAAAAAACTATCTGCAATTGATACACTCTAGGCAAAGAAAA  750

seq1  GGTCAGGTTTTCCTCAATGGAATCTTAGTATATCAACCATACTTTTAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGTTTTCCTCAATGGAATCTTAGTATATCAACCATACTTTTAGGC  800

seq1  AGGCTCCATGCCTGAGAGTAGTTGGCCAACATAAAACAAATTCAATGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCATGCCTGAGAGTAGTTGGCCAACATAAAACAAATTCAATGCTA  850

seq1  TTTTTGTAGACCTTTTCTCTGATTTTGCTTTGCTTGGGCATATGTTTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTAGACCTTTTCTCTGATTTTGCTTTGCTTGGGCATATGTTTTGT  900

seq1  CTTACTGGTCTCTGTTTGTTTATTTATTTGATTTGTTTCTGTGAACTCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGGTCTCTGTTTGTTTATTTATTTGATTTGTTTCTGTGAACTCTC  950

seq1  TGTCTGTCTGTCTGTCTGTCTGTCTGTCTTTGTGTGTGTGTGTTTCTTCT  1000
      |||||||||||||||||||||||||||||||| ||| ||||| ||||   
seq2  TGTCTGTCTGTCTGTCTGTCTGTCTGTCTTTG-GTG-GTGTG-TTCT--C  995

seq1  TTTTCTGTTTTATTTT  1016
      |||||||  |||||||
seq2  TTTTCTG--TTATTTT  1009

seq1: chrX_36720788_36721262
seq2: B6Ng01-223B08.g_291_800 (reverse)

seq1  TAATTAAC-AAAATCAGAAATAAAAAGGGAGAAATAACAACA-GATCCTG  48
      |||||| | ||||||||||||||||||||||||||||||| | ||| |||
seq2  TAATTACCAAAAATCAGAAATAAAAAGGGAGAAATAACAAAAGGATGCTG  50

seq1  AAGAAATCCAAAACACCATCAGATCCTTCTACAACAGGCTATACTCAACA  98
      | |||||||||||||||||||| || || ||||| || ||||||||||||
seq2  AGGAAATCCAAAACACCATCAGTTCTTTTTACAAAAGACTATACTCAACA  100

seq1  AAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGT  148
      ||||||||||||||||||||||||| ||||||||| |||||||||||| |
seq2  AAACTGGAAAACCTGGACGAAATGGTCAAATTTCTAGACAGATACCAGAT  150

seq1  ACCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATTAC  198
      ||||||||| ||||||||||||||| |  || |||||||||||||||  |
seq2  ACCAAAGTT-AATCAGGATCAAGTTAATGATTTAAACAGTCCCATATCCC  199

seq1  CTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACC------------  236
      ||||||||||||||||||| ||||||||||||||| ||            
seq2  CTAAAGAAATAGAAGCAGTCATTAATAGTCTCCCACCCAAAAAAAAAAAA  249

seq1  ---------------------AAAAAAAGCCCAGGACCAGACGGGTTTAG  265
                           |||||||||||||||||||  || |||||
seq2  AAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCCAGGACCAGGTGGCTTTAG  299

seq1  TGCAGAGTTCAATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCAC-  314
      |||| ||||| |  | ||||||| ||||||||||||||||||||||||| 
seq2  TGCACAGTTCTACTACACCTTCAGAGAAGATCTAATTCCAGTTCTGCACA  349

seq1  AACTATTTCACAAAATAGAAGTAGAAGGTACTCTACCCAACTCATTTTAT  364
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  AACTATTCCACAAAATAGAAGTAGAAGGTACTCTACCCAACTCATTCTAT  399

seq1  GAAGCCACTATTACTCTGATACCTAAACCACAGAAAGACCCAACAAAGAT  414
      |||||||| ||||||||||||||||||||||| ||||| |||||||||||
seq2  GAAGCCACAATTACTCTGATACCTAAACCACATAAAGATCCAACAAAGAT  449

seq1  AAAGAACTTCAGACCAATTTCTCTTATGAATATCGATGCAAAAAACCTCA  464
      | |||||||||||||| |||| ||||||||||||||||||||||  ||||
seq2  AGAGAACTTCAGACCAGTTTCCCTTATGAATATCGATGCAAAAATACTCA  499

seq1  ATAAAATTCTC  475
      |||||||||||
seq2  ATAAAATTCTC  510

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BAC

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Alignment Information