BAC Information

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BAC

Clone NameB6Ng01-224C13
ChromosomeX (Build37)
Map Location 4,895,379 - 4,896,470
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000016407, OTTMUSG00000016437, OTTMUSG00000016420, LOC547057, EG546327, EG668965, LOC546185, LOC100043933, LOC670673, LOC100042254, LOC100043934, LOC100042267, LOC100042275, LOC668967, LOC434724, LOC100043935, LOC668968
Downstream geneLOC546182, Mycs, LOC668969, LOC668970, OTTMUSG00000016453, LOC627412, LOC436185, LOC668971, LOC100043936, LOC668972, Nudt11, LOC208428, AU022751, Nudt10, Bmp15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224C13.bB6Ng01-224C13.g
ACCGA038697GA038698
length1,1041,130
definitionB6Ng01-224C13.b B6Ng01-224C13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaaccaatgtagtccagagctttccagaaggaactcgaaccac
tggttgggggagaggggggctcctgtgtctctgctcctgttggctccagg
cactcccaattgtgttggaacagatgttgcattccactcaccagtgatcc
taagatcctgggcatgctagggtgcctggggaatggagagtcctttggga
ccttgggaattttcgccaagcttgaatccaaggtggccctgcattggctt
tgactggaaggatccccaaatgtatcattttcaaactgccattctacata
taacatttctagtgctgtgtgtccttttggggagttacgaaaatcttcag
agaattggatcagcttaatgtgtgactattatttcacattcacaatttta
atatggtataacacacatgtgtagatgaccttgatttctgttgcgatttc
tggcctggatatgggttttgacctagctgcatccaggccagaaattgcat
tggaaatcattgttgatacagatcactagaaaccaagcatagtgatgacc
tgtcctattttttccagtacagaaaactgattagtgtgtcatagggcagg
gtcagggatatttacagtaacatttcctttcccccgttcttaaaatcact
ttaaatgtgtcagcttctaactgctttagaatggaaaggctagaccagta
accaaaatctacgaatgtgtttcataccaattatattgtgcctaatggct
gctgcctggagaactttataaaggaaaaatggatgggctgcacatggttg
ttcttctctctccatgtgcaaggcgaccccaacatgttggaaaaataaaa
ttctctttgcttttgcatcgatttccaggtttgcattgttcattcagtga
gtccccagtaagctaaagctcaacagagtcttacactggaaccatggcct
cctcctttatatcacatctacatcagattttactacttaagaattctctc
tcaacaggttgggaagctttagcctgggtgggagtccttgccctgaggtc
actagtcctttggatccatccagaatcagtctttttctttataacttctt
atct
gaattccttgatccacttagatttgaggtttgtacaaggagataagaatg
ggtcaattctcattcttctacattataacctccagatgtgccaacaccat
ttgttcaaaatgctgacttttttcccactggatggtcttagctcccttgt
caatactcaagtgaccataggtgtgtggattcatttctgggtcttctatt
ctattccattgatctacccggcttttgctgtaccagtaccatgtagtttt
tatcacaattgctctgaaatacagcttgaggtcaggcatagtgattccac
cagaggttcttttattgttgagaatactttttgttatcctaggttttttt
tttttttttgttattccagatgaatttgcaaattgcactttctaacttaa
tgaagaattgagttggaattttgatggggattgcattgaatcattagatt
gccttcagcaagatagtcatttttactgtattaatcctgtcaatccatga
gtatgggcgatcattacatcttctgagatcttctttgatttctttcttca
gagacctgaagatcttatcatagagatcttttacttccttagttagagtc
acactacggtatttgatattatttgtgactattatgaagggtattgtttc
cctaatttctttctcagcctgtttatcctttgtgtagagaaagaccactg
atttttgcgttaattttatatccagctactgcactgaaactgtttatcag
gtttagaagttgtctggtggaatttttagggccacttatgtatactatca
tatcatttacaaatagtgaaattttgacttcttcctttccaatttgtatc
ccctttatctcctttggtgtctaattgctctggctaggacttcaagtact
atattgaataggtaggaagaaagtggggcagccttgccctcatcctgatt
ttagtgggattgcgtcaagtttctctccatttagtttaatgtgggtactg
ggatggctgtatattgctttattatgttcaggtatgggccttggattctt
gatctttcaagaacttatcatgaagggggtgttgattttgtcatatgggt
ttgccacccactcaaccaaaagggatcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_4895379_4896470
seq2: B6Ng01-224C13.b_48_1151 (reverse)

seq1  AGATAAGAAGTT-TAAAGAAAAAG-CTGATCCTGGATGGAT-CAAAGGAC  47
      |||||||||||| ||||||||||| ||||| |||||||||| ||||||||
seq2  AGATAAGAAGTTATAAAGAAAAAGACTGATTCTGGATGGATCCAAAGGAC  50

seq1  TAGTGACCTCAGGGCAA-GACT-CCACCCA-GCT-AAGCTT-CCAACTTG  92
      ||||||||||||||||| |||| ||||||| ||| |||||| ||||| ||
seq2  TAGTGACCTCAGGGCAAGGACTCCCACCCAGGCTAAAGCTTCCCAACCTG  100

seq1  TGAAGAG-GAATTCTTAAGTAGTAAAATCTGATGTAGATGTGATATAAA-  140
      |  |||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGAGAGAGAATTCTTAAGTAGTAAAATCTGATGTAGATGTGATATAAAG  150

seq1  GAGGAGGCCAT-GTTCCAGTGTAAGACTCTGTTGAGCCTTAGCTTACAGG  189
      ||||||||||| ||||||||||||||||||||||||| ||||||||| ||
seq2  GAGGAGGCCATGGTTCCAGTGTAAGACTCTGTTGAGCTTTAGCTTACTGG  200

seq1  GGACTCACTGAATGAACAATGCAAAGCTGGAAATCGATGCAAAAAGCAAG  239
      ||||||||||||||||||||||||| ||||||||||||||||||   |||
seq2  GGACTCACTGAATGAACAATGCAAACCTGGAAATCGATGCAAAAGCAAAG  250

seq1  AGAAATGTATTTTTCCAACATGTTGGGGTCGCCTTGCACATGGAGAGAG-  288
      |||| | |||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAATTTTATTTTTCCAACATGTTGGGGTCGCCTTGCACATGGAGAGAGA  300

seq1  AGAACAACCATGTGCAGCCCATCCATTTTTCCTTTATAAAGTTCTCCAGG  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAACCATGTGCAGCCCATCCATTTTTCCTTTATAAAGTTCTCCAGG  350

seq1  CAGGAGCCATTAGGCACAATGTGATTGGTATGAAACACATTCGTAGATTT  388
      ||| |||||||||||||||| | |||||||||||||||||||||||||||
seq2  CAGCAGCCATTAGGCACAATATAATTGGTATGAAACACATTCGTAGATTT  400

seq1  TGGTTACTGGTCTAGCCTTTCCATTCTAAAGCAGTTAGAAGCTGACACAT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTACTGGTCTAGCCTTTCCATTCTAAAGCAGTTAGAAGCTGACACAT  450

seq1  TTAAAGTGATTTTAAGAACGGGGGAAAGGAAATGTTACTGTAAATATCCC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTGATTTTAAGAACGGGGGAAAGGAAATGTTACTGTAAATATCCC  500

seq1  TGACCCTGCCCTATGACACACTAATCAGTTTGCTGTACTGGAAAAAATAG  538
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGACCCTGCCCTATGACACACTAATCAGTTTTCTGTACTGGAAAAAATAG  550

seq1  GACAGGTCATCACTATGCTTGGTTTCTAGTGATCTGTATCAACAATGATT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTCATCACTATGCTTGGTTTCTAGTGATCTGTATCAACAATGATT  600

seq1  TCCAATGCAATTTCTGGCCTGGATGCAGCTAGGTCAAAACCCATATCCAG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGCAATTTCTGGCCTGGATGCAGCTAGGTCAAAACCCATATCCAG  650

seq1  GACAGAAATCGCAACAGAAATCAAGGTCATCTACACATGTGTGTTATACC  688
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAAATCGCAACAGAAATCAAGGTCATCTACACATGTGTGTTATACC  700

seq1  ATATTAAAATTGTGAATGTGAAAGAATAGTCACACATTAAGCTGATCCAA  738
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATATTAAAATTGTGAATGTGAAATAATAGTCACACATTAAGCTGATCCAA  750

seq1  TTCTCTGAAGATTTTCGTAACTCCCCAAAAGGACACACAGCACTAGAAAT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGAAGATTTTCGTAACTCCCCAAAAGGACACACAGCACTAGAAAT  800

seq1  GTTATATGTAGAATGGCAGTTTGAAAATGATACATTTGGGGATCCTTCCA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATGTAGAATGGCAGTTTGAAAATGATACATTTGGGGATCCTTCCA  850

seq1  GTCAAAGCCAATGCAGGGCCACCTTGGATTCAAGCTTGGCGAAAATTCCC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGCCAATGCAGGGCCACCTTGGATTCAAGCTTGGCGAAAATTCCC  900

seq1  AAGGTCCCAAAGGACTCTCCATTCCCCAGGCACCCTAGCATGCCCAGGAT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCCAAAGGACTCTCCATTCCCCAGGCACCCTAGCATGCCCAGGAT  950

seq1  CTTAGGATCACTGGTGAGTGGAATGCAACATCTGTTCCAACACAATTGGG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGATCACTGGTGAGTGGAATGCAACATCTGTTCCAACACAATTGGG  1000

seq1  AGTGCCTGGAGCCAACAGGAGCAGAGACACAGGAGCCCCCCTCTCCCCCA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTGGAGCCAACAGGAGCAGAGACACAGGAGCCCCCCTCTCCCCCA  1050

seq1  ACCAGTGGTTCGAGTTCCTTCTGGAAAGCTCTGGACTACATTGGTTTGGA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGGTTCGAGTTCCTTCTGGAAAGCTCTGGACTACATTGGTTTGGA  1100

seq1  ATTC  1092
      ||||
seq2  ATTC  1104