BAC Information

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BAC

Clone NameB6Ng01-232C11
ChromosomeX (Build37)
Map Location 65,542,550 - 65,543,685
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1140, LOC666842, LOC619873, 4933436I01Rik, LOC100040194
Downstream geneEG236844, LOC385372, LOC627888, LOC434788, Fmr1, Fmr1nb, LOC100040244, EG627927, LOC666882, LOC671950, LOC100040255
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232C11.bB6Ng01-232C11.g
ACCGA044561GA044562
length1,1311,187
definitionB6Ng01-232C11.b B6Ng01-232C11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatacgaattacatctgctctaaaatagaaacacaatctaatt
tgcaaatgataattattttgatttgcttaaagcaatcttgttggtagtaa
aattgttctcatctgtaaagttgcaatggagttctcaaagtcgtacagtg
gcaatgtgtaagacacaaaagaccttgtaaactatgaacagttagatttt
aagcacacctgtttatttcaggagaatatgatctttattttaatgacata
tataatgacatagcaatgttgatttgtggaactccaaatgagcaatatgg
tattcagaattacccccaaaatcttttaggtgtggctcataatttcccct
tctttatttagggtagtaagtattctgtagatgacttgatcaaaagtcct
cattttgcagacaggattcaggcctttcccagtatgatggtttgtatatg
cttggcccagggagtggcactattaggaggtgtagccgagttggagtagg
tgtgtcactgtgggtgtgggctacaagacatttatcctagctgtctggaa
gtcagtcttccactagcagcaaccttcagatgaagatgtagatctctcag
ctcctcctgcaccatgcctgcctggatgctgccttgctcctgccttgagg
atactggactgaatctctgaacctgtaagcaattcccaattaaatatggt
tattataagaattttcttggtcatagtgtctggtcacagtagtaaatccc
taactaagacacccactatcccagtgcttagtggcagaacagtcaggata
catcacttatttcctattcagattctaatgctcactgttctctgaaagac
tgtatcctcaatatgactactttgttgcacatgccttattgtcatttaat
tagtttttattttagtcaaagaggtaattgagatgtatatctgaatcatt
ggctacaaaacaagagcagtgaccaatgactctattttgaaactgaaatt
cctgagtttgcgaatatctccctggtaaaagttctgcaggtgtctttttg
cctcatgttttgatgaaggcatttatttaatttattttacatgtgaactt
taattgtaattgctgccatatgcatttatac

gaattctcacctgaggaatattgaaaggctgaaaagcacctgaaaaaatg
ttcagcatccttaatcaccagggaaatgcaaatcaaagcaaccctgagat
tccacctcataccagtcagaatggctaagatcaaaaattcaggtgacaac
agatgttggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtaaaaccactctggaaaacagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgaaatacctctcctgggc
atatattcagaagatgttccaactgctaagaaagacacatgcaccactat
gttcatagcaaccttatttataatagccagaagctggaaagaacacagat
gcccctcaacagaggaatggatacagaaaatgtggtctatttacacaatg
gagtactactcagctattaaaaagaatgaatttattaaattcctagacaa
atagatcgacttggagggcatcatcctgagtgaggtaacccaatcacaaa
agtacatacatgatatgtactcattgacaagtgaatattagcccataaac
ttagaatacccaagatacaagatacaaagcacatgaaactcaagaagacc
gaagaccaaagtgtggacactttgccccttcttagaattgggaacaaaac
atccatggaaggagttacagagacaaagtttggagctgagacaaaaggtt
ggaccatctagagactgccatacccggggatccatcccataatcagcctc
caaatgctgacaccattgcatacactagcaagattttgctgacaggaccc
tgatatagctgtctcttgtgagactatgccggggcctagcaaacacagaa
gtggattgctcacagtcagctattggatggatcacagggcctccaaagga
ggaaatagagaaagtattctaatggagcttaaagaattctgccaccctta
tgggtggaacaacaataatgaacctaccagtggcctcccccggagtctgg
tgatatgtatcagaagattgcccagcctggccatcagtgaaagaagaagg
cccatttgttcatgcaaactttaaattgctcagtcacagggtaagacatg
ggcccaagaaatcggaagtggcttgcgcataggttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_65542550_65543685
seq2: B6Ng01-232C11.b_42_1172 (reverse)

seq1  GTATAAATGCATATAGCAGCATATACAATTAAAGTTTTAACATGTTAAAA  50
      |||||||||||||| ||||||  |||||||||||  || ||||| |||||
seq2  GTATAAATGCATATGGCAGCAATTACAATTAAAG--TTCACATG-TAAAA  47

seq1  TAAATAAAATAAATGCTTTCATCAAAAACATGAGGC-AAAAGACACCTGC  99
      ||||| |||||||||| |||||| |||||||||||| |||||||||||||
seq2  TAAATTAAATAAATGCCTTCATC-AAAACATGAGGCAAAAAGACACCTGC  96

seq1  AGAAACTTTTTACCAGGGAGATA-TCGCAAACTCAGGAATTTCAGTTTCA  148
      ||||   |||||||||||||||| ||||||||||||||||||||||||||
seq2  AGAA--CTTTTACCAGGGAGATATTCGCAAACTCAGGAATTTCAGTTTCA  144

seq1  AAATAAGAGTCATTGGTCACTGCTCTTGTTTTGTAGCCAATGATTCAGAT  198
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAT-AGAGTCATTGGTCACTGCTCTTGTTTTGTAGCCAATGATTCAGAT  193

seq1  ATACATCTCAATTACCTCTTTGACTAAAATAAAAACTAATTAAATGACAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCTCAATTACCTCTTTGACTAAAATAAAAACTAATTAAATGACAA  243

seq1  TAAGGCATGTGCAACAAAGTAGTCATATTGAGGATACAGTCTTTCAGAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCATGTGCAACAAAGTAGTCATATTGAGGATACAGTCTTTCAGAGA  293

seq1  ACAGTGAGCATTAGAATCTGAATAGGAAATAAGTGATGTATCCTGACTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAGCATTAGAATCTGAATAGGAAATAAGTGATGTATCCTGACTGT  343

seq1  TCTGCCACTAAGCACTGGGATAGTGGGTGTCTTAGTTAGGGATTTACTAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCACTAAGCACTGGGATAGTGGGTGTCTTAGTTAGGGATTTACTAC  393

seq1  TGTGACCAGACACTATGACCAAGAAAATTCTTATAATAACCATATTTAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCAGACACTATGACCAAGAAAATTCTTATAATAACCATATTTAAT  443

seq1  TGGGAATTGCTTACAGGTTCAGAGATTCAGTCCAGTATCCTCAAGGCAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATTGCTTACAGGTTCAGAGATTCAGTCCAGTATCCTCAAGGCAGG  493

seq1  AGCAAGGCAGCATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGATCTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGCAGCATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGATCTA  543

seq1  CATCTTCATCTGAAGGTTGCTGCTAGTGGAAGACTGACTTCCAGACAGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCATCTGAAGGTTGCTGCTAGTGGAAGACTGACTTCCAGACAGCT  593

seq1  AGGATAAATGTCTTGTAGCCCACACCCACAGTGACACACCTACTCCAACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAATGTCTTGTAGCCCACACCCACAGTGACACACCTACTCCAACT  643

seq1  CGGCTACACCTCCTAATAGTGCCACTCCCTGGGCCAAGCATATACAAACC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTACACCTCCTAATAGTGCCACTCCCTGGGCCAAGCATATACAAACC  693

seq1  ATCATACTGGGAAAGGCCTGAATCCTGTCTGCAAAATGAGGACTTTTGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACTGGGAAAGGCCTGAATCCTGTCTGCAAAATGAGGACTTTTGAT  743

seq1  CAAGTCATCTACAGAATACTTACTACCCTAAATAAAGAAGGGGAAATTAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCATCTACAGAATACTTACTACCCTAAATAAAGAAGGGGAAATTAT  793

seq1  GAGCCACACCTAAAAGATTTTGGGGGTAATTCTGAATACCATATTGCTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACACCTAAAAGATTTTGGGGGTAATTCTGAATACCATATTGCTCA  843

seq1  TTTGGAGTTCCACAAATCAACATTGCTATGTCATTATATATGTCATTAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGTTCCACAAATCAACATTGCTATGTCATTATATATGTCATTAAA  893

seq1  ATAAAGATCATATTCTCCTGAAATAAACAGGTGTGCTTAAAATCTAACTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGATCATATTCTCCTGAAATAAACAGGTGTGCTTAAAATCTAACTG  943

seq1  TTCATAGTTTACAAGGTCTTTTGTGTCTTACACATTGCCACTGTACGACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGTTTACAAGGTCTTTTGTGTCTTACACATTGCCACTGTACGACT  993

seq1  TTGAGAACTCCATTGCAACTTTACAGATGAGAACAATTTTACTACCAACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAACTCCATTGCAACTTTACAGATGAGAACAATTTTACTACCAACA  1043

seq1  AGATTGCTTTAAGCAAATCAAAATAATTATCATTTGCAAATTAGATTGTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCTTTAAGCAAATCAAAATAATTATCATTTGCAAATTAGATTGTG  1093

seq1  TTTCTATTTTAGAGCAGATGTAATTCGTATTTGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTTTAGAGCAGATGTAATTCGTATTTGAATTC  1131


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