BAC Information

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BAC

Clone NameB6Ng01-232D10
ChromosomeX (Build37)
Map Location 143,782,131 - 143,783,229
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666730, EG245663, Htr2c
Downstream geneIl13ra2, V1rb10, Lrch2, LOC100039462, LOC666789, LOC434863, EG623995, EG624023, LOC666184, LOC100039511, LOC666812, LOC100039519, LOC434864, EG624096, LOC100039545
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232D10.bB6Ng01-232D10.g
ACCGA044607GA044608
length9991,183
definitionB6Ng01-232D10.b B6Ng01-232D10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctctaccccatatttttttaaataaggttattt
ggttctttggagtctaacttcttgaattctttgtatacattgggtattaa
ccctctatgggatgtaggattggtaaagattttatcctattgacagtgtc
ctttgccttacagaagctttgcccttttatgaggtcccatttgttgattc
ttgatcttacagcataagccattgatgtcctattcaggaattttccccct
gtgcccatgtgttcaaggatcttgcccatgttctcctctataagcttcag
tctatctggctttatgcagggtccttgatccacttagacttgagctttgt
acaaggagataagaatggatcaatattcatttttctacatgctgaccacc
agttgaaccagcaccatttgttaaaaatgctgtcttttttccactggatg
gtttttgctcctttgttaaagatcaagtggccataggtgtgtgggttcat
ttctggatctccagttctatcccaatgatcttcctgcatgtctctgtacc
aataccatggcgttttttgtgttttgttttttaatcactattgcactatt
gctctctaatacagcttgagatctgtgatggtgatttcccccagaagttc
ttttattattgaaagtagtttttgctatcttaggtttttttgttattcta
aatgaattttgcaaattgctctttctttctttctttcttttctttctttt
ctttcttttttgtttttttgtttgttttgtttgtttgtttgtttggtttt
tcaagacagggttttttcttctgtatagccctggctgtcctggaactcac
tctgtagaccaggctggcctcaaactcagaaatccctctgcctcccaagt
gctaggaattaaaggcacacaccatcacctgccctgtcaatttgctcttt
cttaacctctattgaagattcgtttgggaattttgaatgggggaatgca
gaattcccaaaggcttcaactctgaatactactgcagtggtgtcttagct
actgtttctattgttatgaagaaaaaccatgaccaagaccactcttttaa
aaggaagcatctaattggggctttccttacagagagttcatgatcatcat
gtagagaaaaaactgcggtgctggagcatggctgaaagctttctttactg
ataggaaggtagcacacacacacacacacacacacacacacacacacaca
cagagtgtgtgagagagagagagagagacagagagacagagagacagaga
gagacagagagatagagagagaaacagagacagaaacagtgacagaaaga
cagaaagacagagagactggccttggcataggcttttgaaacctcaaacc
cacccccatcaacatacctactgcaacaaggccacacctcctaatccttt
taaaaagttcccaattgggtactggccatgcaaatatatgagcttagggg
cctagttccatttaaactactagatgtggcttcgaagacttttaatacac
agatctttgggtaaaccctcatatcatatctaagacactagatatactaa
ccaaaatcaataaaatactaactgaaaaggaaatgactaataaataataa
taaatataagaccatctgtttcattgatatcaaaaaagagagtaaagtgt
catgtaacagtatggttactgttattttcaatatgtaagactgatacttt
ataggataatacaaacaaatgtgtcttacgtgtaatgatatttccatggg
tggaaaaatttgagtgaaaggtttatgactacaaaactaaagacttgctt
gcttcagactcatgggtcatcctcctgcctcagtctcccaagtactaaga
tttaccagaattccactaaaatggggtgggaaattattttaggccttatc
taaattgtacttttcaaagtacactttgcaaatggaatggtgaatttaaa
ctttacaaaggctaattttttaaagggccaaatgtaaaaaggttaaatat
ctagtaatttttaaattggatgcctattaataatggtaaaatattcaggg
caacggaataaatatatttccatataaaatatattactggtgacaggaat
ctgttaagttagaaacgggtgcacacttgcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_143782131_143783229
seq2: B6Ng01-232D10.g_148_1250

seq1  GACCAAGACCACTCTTTTAAAAGGAAGCATCTAATTGGGGCTTTCCTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGACCACTCTTTTAAAAGGAAGCATCTAATTGGGGCTTTCCTTAC  50

seq1  AGAGAGTTCATGATCATCATGTAGAGAAAAAACTGCGGTGCTGGAGCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTTCATGATCATCATGTAGAGAAAAAACTGCGGTGCTGGAGCATG  100

seq1  GCTGAAAGCTTTCTTTACTGATAGGAAGGTAGCACACACACACACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGCTTTCTTTACTGATAGGAAGGTAGCACACACACACACACACA  150

seq1  CACACACACACACACACACACAGAGTGTGTGAGAGAGAGAGAGAGAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACAGAGTGTGTGAGAGAGAGAGAGAGAGACA  200

seq1  GAGAGACAGAGAGACAGAGAGAGACAGAGAGATAGAGAGAGAAACAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACAGAGAGACAGAGAGAGACAGAGAGATAGAGAGAGAAACAGAGA  250

seq1  CAGAAACAGTGACAGAAAGACAGAAAGACAGAGAGACTGGCCTTGGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACAGTGACAGAAAGACAGAAAGACAGAGAGACTGGCCTTGGCATA  300

seq1  GGCTTTTGAAACCTCAAACCCACCCCCATCAACATACCTACTGCAACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTGAAACCTCAAACCCACCCCCATCAACATACCTACTGCAACAAG  350

seq1  GCCACACCTCCTAATCCTTTTAAAAAGTTTATTAATTGGGTACTGGCCAT  400
      ||||||||||||||||||||||||||| ||   |||||||||||||||||
seq2  GCCACACCTCCTAATCCTTTTAAAAAG-TTCCCAATTGGGTACTGGCCAT  399

seq1  GCAAATATATGAGCTTAGGGGCCTAGTTCCATTTAAACTACTAGATGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATATGAGCTTAGGGGCCTAGTTCCATTTAAACTACTAGATGTGG  449

seq1  CTTCGAAGACTTTTAATACACAGATCTTTGGGTAAACCCTCATATCATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGAAGACTTTTAATACACAGATCTTTGGGTAAACCCTCATATCATAT  499

seq1  CTAAGACACTAGATATACTAACCAAAATCAATAAAATACTAACTGAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACACTAGATATACTAACCAAAATCAATAAAATACTAACTGAAAAG  549

seq1  GAAATGACTAATAAATAATAATAAATATAAGACCATCTG-TTCATTGATA  599
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAAATGACTAATAAATAATAATAAATATAAGACCATCTGTTTCATTGATA  599

seq1  TCAAAAAAGAGAGTAAAGTGTCATGTAACAGTATGGTTACTGTTATTTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAAGAGAGTAAAGTGTCATGTAACAGTATGGTTACTGTTATTTTC  649

seq1  AATATGTAAGACTGATAC-TTATAGGATAATACAAACAAATGTGTCTTAC  698
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AATATGTAAGACTGATACTTTATAGGATAATACAAACAAATGTGTCTTAC  699

seq1  GTGTAATGATATTTCCATGGGTGGAAAAATTTGAGTGAAAGGTTTATGAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATGATATTTCCATGGGTGGAAAAATTTGAGTGAAAGGTTTATGAC  749

seq1  TACAAAACT-AAGAC-TGCTTGCTTCAGACTCAT-GGTCATCCTCCTGCC  795
      ||||||||| ||||| |||||||||||||||||| |||||||||||||||
seq2  TACAAAACTAAAGACTTGCTTGCTTCAGACTCATGGGTCATCCTCCTGCC  799

seq1  TCAGTCTCCCAAGTACTAAGA-TTACCAGAATT-CACTAAAAT-GGGTGG  842
      ||||||||||||||||||||| ||||||||||| ||||||||| ||||||
seq2  TCAGTCTCCCAAGTACTAAGATTTACCAGAATTCCACTAAAATGGGGTGG  849

seq1  --AAATATTTTAAGCCTTATCT-AATTGTACTTTTCAAAGTACACTTTGC  889
        || ||||||| ||||||||| |||||||||||||||||||||||||||
seq2  GAAATTATTTTAGGCCTTATCTAAATTGTACTTTTCAAAGTACACTTTGC  899

seq1  AAATGGA--TGTGAA-TTAAACTTTACAAA-GCTAATTTTT--AAAGGCA  933
      |||||||   ||||| |||||||||||||| ||||||||||  || ||| 
seq2  AAATGGAATGGTGAATTTAAACTTTACAAAGGCTAATTTTTTAAAGGGCC  949

seq1  AAATGTAAAAAAGGTTAAAATATCTAAGTAATTTTTATATTGAATGCTAT  983
      |||||| ||||||||| |||||||| ||||||||||| |||| ||||   
seq2  AAATGT-AAAAAGGTT-AAATATCT-AGTAATTTTTAAATTGGATGCCTA  996

seq1  TTAATTAATGGTAAAATATTCAGTGCAACAGAATAAAATATATTTCAATA  1033
      |||| |||||||||||||||||| ||||| |||| ||||||||||| |||
seq2  TTAA-TAATGGTAAAATATTCAGGGCAACGGAAT-AAATATATTTCCATA  1044

seq1  ATAAAAATATAATTATAACTGTTTGACAAGGATACTGTTAAG-TAGAAAA  1082
         ||||||    ||| ||||  |||| ||||  |||||||| |||||| 
seq2  --TAAAATA----TATTACTG-GTGAC-AGGAATCTGTTAAGTTAGAAAC  1086

seq1  CAGTGCACACTTGCCCC  1099
        |||||||||||||||
seq2  GGGTGCACACTTGCCCC  1103