BAC Information

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BAC

Clone NameB6Ng01-234F19
ChromosomeX (Build37)
Map Location 143,707,677 - 143,708,751
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666730, EG245663, Htr2c
Downstream geneIl13ra2, V1rb10, Lrch2, LOC100039462, LOC666789, LOC434863, EG623995, EG624023, LOC666184, LOC100039511, LOC666812, LOC100039519, LOC434864, EG624096
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234F19.bB6Ng01-234F19.g
ACCGA046151GA046152
length1,1471,076
definitionB6Ng01-234F19.b B6Ng01-234F19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgttcttgtggctgtcttctttttggtttgttgagggattactt
tcttgcttgttctagggcgttttttccgtccttgtattgttttttttttt
tttctgcttttttttttttttgttattatcctttgaagggctggattcat
ggaaagataatgcgtgaatttggttttttcgtggaatactttggtttctc
catctatggtaattgagagtttggctgtgtatagtagcctgggttggcat
ttgtgttctcttattgtctgtataacatctgtccaggatcttctggcttt
catagtctctggtgaaaagtctagtgtaattctgttaggcctgcctttat
atgttacttgacctttttccctcactgcttttaatattctatctttattt
agtgcatttcttgttctgattattatgtattgggaggaatttcttttctg
gccccgtctatttggagttctgtaggcttcttgtatgtccatgggcatgt
cattctttaggtttgggaagctttcttctatcattttgttgaagatattt
gctggccctttaagttgaaaatcttcattatcatcaactcctattatccg
ttggtttggtcttctcattgtgtcctggatttcctggatgttttgagtta
gtaactttttgcattttgcattttctttgattgttatgccgatgttctct
attgaatcttctgcacctgagattctctcttccatctcttgtattctgtt
gctgatgcttgcatctatggttctagatttctttcctagcttttctatct
ccagcgtttcctcactttgggttttctttaggtgtctacttcccttttta
actcttggatggttttattcatttccattacttgtttggtcgtgttttcc
tgcaattctttaagggatttttgtgctttctctttaaggtcttctacctg
ttagctgtgttctcctgtatttctttaagtgagttattaagtccttcttg
atgttctctaccatcatcatggagatgctatgaatcaagaactatcaatt
cggtgtgttcgggtgcccatgaactggtgggtagaatgctagtttgagat
aatgtgaatggactaatcggtagaagatcctaacgtggcttaacacc
gaattcttggtaccaatgattcaatcttaagcacactagagctgagcctg
aatatttgagataaactcctcactcacaagctcagttctataccttgctt
catcagagtggcatgcttcagacccctccagtgtagaaggaggaagaata
aagtgtttttgctcaaagtcagctgactcttttggcatacctttaatgtc
aggggctactatggttagaggaagtaaggcctaggccctcttcaaaagat
aacccaactgggtgtcagcccccttaaagttatgggatactttacttctg
agagaacatgacttgatggaggtgctgtttatgctggaggtataaattat
cctgggtctagaaatgttcatctaagtccccattgtgacttcatcaatgc
tattgcatgctgatagtaaaagagccatatttgtggtcttcttaagatat
tgttgaagtctgaggtcctttgcttatcatgtcatatgtatcagggcaca
ttcagtcattgaggacctatgtgacacctttgttctgaagtggtaattct
gagggcaattaaagaatttctgaggtttgtagtaatcatatgttaatgct
gccttcaactctgtggagtttctaacatatttgatgttgaggtggtacat
ctgaaacccccttgggttattggtggaagttttgagtcacacaggttcta
tttcatgtatgtgggtgtactgtcattgtcttcagacacaccataaggtg
gcatttgatcccattccagatggttgtgagccaccatgtggttgctggaa
attgaactcaagacctgtggaagagcagtcagtgcttttaacttctgagc
atctctccagccccagcacattggttctagacaggtaagattaaggtcac
ttagaccattgaggaagatctgaggatccctgggttcagaatgggcagat
cagaaggtctccttaagtccatacagaagttgggacgatctgtggtctta
agctgtagatctgaaccttactagagaagaatgctggaatgtatttgaat
tcttggttaagacaaagtgtaactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_143707677_143708751
seq2: B6Ng01-234F19.g_68_1143 (reverse)

seq1  TCAGGTACATTTTGTCTAAATTAGGAATTCAAATACACTCCAGGCATTCT  50
      |||| |||| ||||||| ||  | ||||||||||||| |||| |||||||
seq2  TCAGTTACACTTTGTCTTAACCAAGAATTCAAATACATTCCA-GCATTCT  49

seq1  TCTTTAGTAAGGTTCAGACCTACAGCTTAAGAACCACAGATCTTCCAAAC  100
      ||| |||||||||||||| |||||||||||| |||||||||| ||| |||
seq2  TCTCTAGTAAGGTTCAGATCTACAGCTTAAG-ACCACAGATCGTCCCAAC  98

seq1  TACTGTATGGAC-CAAGGGGA-CTTCTGATCTGCCCATTCTGAA-CCAGG  147
      | ||||||||||  |||| || |||||||||||||||||||||| |||||
seq2  TTCTGTATGGACTTAAGGAGACCTTCTGATCTGCCCATTCTGAACCCAGG  148

seq1  GATCC-CATATCTTACCCAATAGCCTAAGTGACCTTAATCTTACCTGTCT  196
      ||||| || ||||| | |||| | ||||||||||||||||||||||||||
seq2  GATCCTCAGATCTTCCTCAATGGTCTAAGTGACCTTAATCTTACCTGTCT  198

seq1  AGAACCAATGTGCTGGGACTGAAGATATGGCTCAGCAGTTAAAAGCACTG  246
      ||||||||||||||||| ||| ||| || |||||| ||||||||||||||
seq2  AGAACCAATGTGCTGGGGCTGGAGAGAT-GCTCAGAAGTTAAAAGCACTG  247

seq1  ACTGCTCTTCCACAGGTCCTGAGTTAAATTCCCAGCAACCACATGGTGGC  296
      |||||||||||||||||| |||||| |||| |||||||||||||||||||
seq2  ACTGCTCTTCCACAGGTCTTGAGTTCAATTTCCAGCAACCACATGGTGGC  297

seq1  TCACAATCATCTGTAATGAGACCCGATGCCACTTTATGGTGTGTCTGAAG  346
      |||||| |||||| |||| || |  ||||||| |||||||||||||||||
seq2  TCACAACCATCTGGAATGGGATCAAATGCCACCTTATGGTGTGTCTGAAG  347

seq1  ACAATGACAGTATACCCACATACATGAAATAGAACCTATGTGCCTCACAA  396
      |||||||||||| |||||||||||||||||||||||| |||| |||| ||
seq2  ACAATGACAGTACACCCACATACATGAAATAGAACCTGTGTGACTCAAAA  397

seq1  CTTTCACCAATAACTCAAGGGGGTTTCAGATGTACCCCCTCAACATCAAA  446
      ||| |||||||||| ||||||||||||||||||||| |||||||||||||
seq2  CTTCCACCAATAACCCAAGGGGGTTTCAGATGTACCACCTCAACATCAAA  447

seq1  TATGTTAGAAACTCCCCAGTGTTGAAGGTATCATTAACACATGAGAACCA  496
      ||||||||||||||| ||| |||||||| | |||||||| ||||  || |
seq2  TATGTTAGAAACTCCACAGAGTTGAAGGCAGCATTAACATATGATTACTA  497

seq1  GAAACCTCAGAAATTCTTTAATTGCCCTGAGAATTACCACTTCAGAACAA  546
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CAAACCTCAGAAATTCTTTAATTGCCCTCAGAATTACCACTTCAGAACAA  547

seq1  TGGTGTCACATAGGTTCTCAATGACTGAAGATGCCCTGATACATACGACA  596
       |||||||||||||| |||||||||||||  |||||||||||||| ||||
seq2  AGGTGTCACATAGGTCCTCAATGACTGAATGTGCCCTGATACATATGACA  597

seq1  TGATAATCAAAGAACTTCTGACCTCAACAATATCTTTAGAAGGCCACAAA  646
      |||||| ||||| || || ||| ||||||||||||| ||||| |||||||
seq2  TGATAAGCAAAGGACCTCAGACTTCAACAATATCTTAAGAAGACCACAAA  647

seq1  TATGGCTCTTTTACTATAAGCATGCAATAGCATTGATGAAGTCACAATGG  696
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TATGGCTCTTTTACTATCAGCATGCAATAGCATTGATGAAGTCACAATGG  697

seq1  GGACTCAGATGTACCCTTCTAGACCCAGGATAATTTATACCCCCAGCGTA  746
      ||||| ||||| ||  ||||||||||||||||||||||||| ||||| ||
seq2  GGACTTAGATGAACATTTCTAGACCCAGGATAATTTATACCTCCAGCATA  747

seq1  AATAGCAACTCCATCAAGTCATGTCCCCTCAGAAGTAAAGTATCCCATAA  796
      || |||| |||||||||||||||| | |||||||||||||||||||||||
seq2  AACAGCACCTCCATCAAGTCATGTTCTCTCAGAAGTAAAGTATCCCATAA  797

seq1  CTTCAAGGGGGCTGATACCCAGTTGGATTATCTTTTGAAGAGGGCCTAGG  846
      ||| ||||||||||| |||||||||| |||||||||||||||||||||||
seq2  CTTTAAGGGGGCTGACACCCAGTTGGGTTATCTTTTGAAGAGGGCCTAGG  847

seq1  CCTTACTTCCTCTAACCATAGTAGCCACTGACATTAAGGGTATGCCAAAG  896
      |||||||||||||||||||||||||| |||||||||| ||||||||||| 
seq2  CCTTACTTCCTCTAACCATAGTAGCCCCTGACATTAAAGGTATGCCAAAA  897

seq1  GGGTCAGCTGACCTTGAGTAAAAACACTTTATTCTTCCTCCTTCTGCACT  946
      | |||||||||| ||||| |||||||||||||||||||||||||| ||||
seq2  GAGTCAGCTGACTTTGAGCAAAAACACTTTATTCTTCCTCCTTCTACACT  947

seq1  AGAGGGGTCTAAGGCATGCCCCTCTGATGAAGCAAGGTATAGAACTGACC  996
       ||||||||| | ||||||| ||||||||||||||||||||||||||| |
seq2  GGAGGGGTCTGAAGCATGCCACTCTGATGAAGCAAGGTATAGAACTGAGC  997

seq1  TTGTGAGTGAGGAGTTTATCTCAAATATTCAGGTTCAGCTCTAGTGTGCT  1046
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTGTGAGTGAGGAGTTTATCTCAAATATTCAGGCTCAGCTCTAGTGTGCT  1047

seq1  TAAGACTGAATCCTTGGTACCAAGAATTC  1075
      ||||| |||||| ||||||||||||||||
seq2  TAAGATTGAATCATTGGTACCAAGAATTC  1076