BAC Information

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BAC

Clone NameB6Ng01-236M22
ChromosomeX (Build37)
Map Location 75,464,766 - 75,561,252
singlet/doubletdoublet
Overlap geneLOC236874
Upstream geneLOC385474, EG436208, LOC546331, LOC100041212, Tbl1x, EG628893, LOC667606, Prkx, Pbsn, OTTMUSG00000017866, LOC100042001, 5430402E10Rik, LOC628976, Obp1a, EG546335, EG628991
Downstream geneEG667658, 4930480E11Rik, EG667672, Prrg1, LOC667679, LOC667684, 4921509A18Rik, LOC667700, EG546337, EG629116, LOC636082
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236M22.bB6Ng01-236M22.g
ACCGA047936GA047937
length8871,169
definitionB6Ng01-236M22.b B6Ng01-236M22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,560,366 - 75,561,252)(75,464,766 - 75,465,748)
sequence
gaattctaataatataaatcttttatagtcttattctaataatatgaatc
tttgatattcttaaaggatcatatgtaaatctgtgaatttcattgcacat
atgtaactggctctacttattgaaatttgcttctctagacaatcttctct
accactgtagaatttaccttcatgagaatattttgttcaatataggtata
tttagctgagtaacttcttaggttattgcttatagcatatgaatttcttg
tgacacaaataacataaattggttattgaaaaattgataattgagcctca
ttctctattacctaattgagcacctaagatgacagtctcatcattgtctt
tctacattatataatacgtttagaaactcgtccttttgtcaataatccat
atcatgctaacctttcttaagtgataatatctttggcaaaatataaaaat
gtccatctaactcttggactgattgcacaacaggatgcattgacaaaaaa
acaataaagcttccacaatgaaccacacttgatattgcctttgatccaat
atggaaaatgcatgaaatatgttttaattcacgtcctatccaaaaaatga
agtagtgagaacttttcaagaaggtagaaaccgagaaataacaaaatgaa
gattctgttgttagctgctgtcatcagctttgttgacattgaagaggttc
ctccttctgaataggaagaagaaaaggtatgtctgattgtgtgtttgtat
gtggtttcctatcatattaacctatatgataagcaaaattcttcacatta
gcatgcatattttgtactgttttgttcacatgttattatgtatatgtaga
tattcatgtatgtgtatatgagggtatttatgtgggg
gaattccaggaaaacacaaccgagcaggtgaaggaattgagcaaaaccat
ccaggatctaaaaatggaaatagaaacaataaagtcacaaagggagataa
ccctggagacagaaaacctaggaaagagatcatgagtcatagctacaagc
atcacaaacagagcacaagagaaagaagaaagaatctcaggggcaaaaga
taccatacaaaacacagacacaacattcaaagaaaacgtgaaatgcaaaa
agctgctaacccaaaacatccaggaaatccagaacataatgagaagacca
aatcgaagaataataggtatcgaggagagcaaagattcccaacttagaag
gcaggttaatatcttcaacaaaattatacaaaaaaacttccctaacctaa
agaaagagattctcacaaacaggaagcctacataatcccaaatagatggg
actagaaaagaattttctcccatcacataataatcaaaacactaaatgca
caaaacaaagaaaatattaaaagcaataagagaaaaagggtaagtaatat
ataaaggcagatctgtgagaattacaccagacttctcaacatagattcta
aaagccagaatatcctgggcatttgtaatacagaccacaagagaacacaa
atgccagtccagactaccataccaatttttaatctgatcataccatcacc
atggtgtctctattagtcacctacatgaaaatcagtaaaacaaaggctat
cagagacaaaatacagaaaactggcctacaggatcaaatactgaaaatat
tcttcactaggagttctagaattttatagggcacacatctataaagagtg
tcacaaactttagcataaattttttaaaatgtaggggtggaatgtcatag
accatatatgagtcatgtgtcatgtccatgaaattgaaagcatagggcat
cacagttttgcttagtttatacaggggttctgtgactatttttcttaatt
gcaaaatagggtagtttgttcagaattatatcttcagtagcatgtactgc
tttcaaataaaagtaatgaacattacagatctaataagaatactctgtta
ctcatttccatactcctcaatatgtccatgatgaggtcatcaaattcccg
acaaaaatatacggttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_75560366_75561252
seq2: B6Ng01-236M22.b_43_929 (reverse)

seq1  CCCCACATAAATACCCTCATATACACATACATGAATATCTACATATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACATAAATACCCTCATATACACATACATGAATATCTACATATACAT  50

seq1  AATAACATGTGAACAAAACAGTACAAAATATGCATGCTAATGTGAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATGTGAACAAAACAGTACAAAATATGCATGCTAATGTGAAGAAT  100

seq1  TTTGCTTATCATATAGGTTAATATGATAGGAAACCACATACAAACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTATCATATAGGTTAATATGATAGGAAACCACATACAAACACACA  150

seq1  ATCAGACATACCTTTTCTTCTTCCTATTCAGAAGGAGGAACCTCTTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACATACCTTTTCTTCTTCCTATTCAGAAGGAGGAACCTCTTCAAT  200

seq1  GTCAACAAAGCTGATGACAGCAGCTAACAACAGAATCTTCATTTTGTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACAAAGCTGATGACAGCAGCTAACAACAGAATCTTCATTTTGTTAT  250

seq1  TTCTCGGTTTCTACCTTCTTGAAAAGTTCTCACTACTTCATTTTTTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGGTTTCTACCTTCTTGAAAAGTTCTCACTACTTCATTTTTTGGAT  300

seq1  AGGACGTGAATTAAAACATATTTCATGCATTTTCCATATTGGATCAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGTGAATTAAAACATATTTCATGCATTTTCCATATTGGATCAAAGG  350

seq1  CAATATCAAGTGTGGTTCATTGTGGAAGCTTTATTGTTTTTTTGTCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCAAGTGTGGTTCATTGTGGAAGCTTTATTGTTTTTTTGTCAATG  400

seq1  CATCCTGTTGTGCAATCAGTCCAAGAGTTAGATGGACATTTTTATATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGTTGTGCAATCAGTCCAAGAGTTAGATGGACATTTTTATATTTT  450

seq1  GCCAAAGATATTATCACTTAAGAAAGGTTAGCATGATATGGATTATTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAGATATTATCACTTAAGAAAGGTTAGCATGATATGGATTATTGAC  500

seq1  AAAAGGACGAGTTTCTAAACGTATTATATAATGTAGAAAGACAATGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGACGAGTTTCTAAACGTATTATATAATGTAGAAAGACAATGATGA  550

seq1  GACTGTCATCTTAGGTGCTCAATTAGGTAATAGAGAATGAGGCTCAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCATCTTAGGTGCTCAATTAGGTAATAGAGAATGAGGCTCAATTA  600

seq1  TCAATTTTTCAATAACCAATTTATGTTATTTGTGTCACAAGAAATTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTTCAATAACCAATTTATGTTATTTGTGTCACAAGAAATTCATA  650

seq1  TGCTATAAGCAATAACCTAAGAAGTTACTCAGCTAAATATACCTATATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAAGCAATAACCTAAGAAGTTACTCAGCTAAATATACCTATATTG  700

seq1  AACAAAATATTCTCATGAAGGTAAATTCTACAGTGGTAGAGAAGATTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATATTCTCATGAAGGTAAATTCTACAGTGGTAGAGAAGATTGTC  750

seq1  TAGAGAAGCAAATTTCAATAAGTAGAGCCAGTTACATATGTGCAATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAGCAAATTTCAATAAGTAGAGCCAGTTACATATGTGCAATGAAA  800

seq1  TTCACAGATTTACATATGATCCTTTAAGAATATCAAAGATTCATATTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGATTTACATATGATCCTTTAAGAATATCAAAGATTCATATTATT  850

seq1  AGAATAAGACTATAAAAGATTTATATTATTAGAATTC  887
      |||||||||||||||||||||||||||||||||||||
seq2  AGAATAAGACTATAAAAGATTTATATTATTAGAATTC  887

seq1: chrX_75464766_75465748
seq2: B6Ng01-236M22.g_242_1233

seq1  GAAAGAATCTCAGGGGCAAAAGATACCATACAAAACACAGACACAACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATCTCAGGGGCAAAAGATACCATACAAAACACAGACACAACATT  50

seq1  CAAAGAAAACGTGAAATGCAAAAAGCTGCTAACCCAAAACATCCAGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAACGTGAAATGCAAAAAGCTGCTAACCCAAAACATCCAGGAAA  100

seq1  TCCAGAACATAATGAGAAGACCAAATCGAAGAATAATAGGTATCGAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAACATAATGAGAAGACCAAATCGAAGAATAATAGGTATCGAGGAG  150

seq1  AGCAAAGATTCCCAACTTAGAAGGCAGGTTAATATCTTCAACAAAATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGATTCCCAACTTAGAAGGCAGGTTAATATCTTCAACAAAATTAT  200

seq1  ACAAAAAAACTTCCCTAACCTAAAGAAAGAGATTCTCACAAACAGGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAACTTCCCTAACCTAAAGAAAGAGATTCTCACAAACAGGAAGC  250

seq1  CTACATAATCCCAAATAGATGGGACTAGAAAAGAATTTTCTCCCATCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAATCCCAAATAGATGGGACTAGAAAAGAATTTTCTCCCATCACA  300

seq1  TAATAATCAAAACACTAAATGCACAAAACAAAGAAAATATTAAAAGCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATCAAAACACTAAATGCACAAAACAAAGAAAATATTAAAAGCAAT  350

seq1  AAGAGAAAAAGGGTAAGTAATATATAAAGGCAGATCTGTGAGAATTACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAAAGGGTAAGTAATATATAAAGGCAGATCTGTGAGAATTACAC  400

seq1  CAGACTTCTCAACATAGATTCTAAAAGCCAGAATATCCTGGGCATTTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTCTCAACATAGATTCTAAAAGCCAGAATATCCTGGGCATTTGTA  450

seq1  ATACAGACCACAAGAGAACACAAATGCCAGTCCAGACTACCATACCAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGACCACAAGAGAACACAAATGCCAGTCCAGACTACCATACCAATT  500

seq1  TTTAATCTGATCATACCATCACCATGGTGTCTCTATTAGTCACCTACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCTGATCATACCATCACCATGGTGTCTCTATTAGTCACCTACATG  550

seq1  AAAATCAGTAAAACAAAGGCTATCAGAGACAAAATACAGAAAACTGGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGTAAAACAAAGGCTATCAGAGACAAAATACAGAAAACTGGCCT  600

seq1  ACAGGATCAAATACTGAAAATATTCTTCACTAGGAGTTCTAGAATTTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATCAAATACTGAAAATATTCTTCACTAGGAGTTCTAGAATTTTAT  650

seq1  AGGGCACACATCTATAAAGAGTGTCACAAACTTTAGCATAAATTTTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCACACATCTATAAAGAGTGTCACAAACTTTAGCATAAATTTTTTAA  700

seq1  AATGTA-GGGTGGAATGTCATAGACCATATATGAGTCATGTGTCATGTCC  749
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGGGGTGGAATGTCATAGACCATATATGAGTCATGTGTCATGTCC  750

seq1  ATGAAATTGAAAGCATAGGGCATCACAGTTTTGCTTAGTTTATACA-GGG  798
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGAAATTGAAAGCATAGGGCATCACAGTTTTGCTTAGTTTATACAGGGG  800

seq1  TTCTGTGACTA-TTTTCTTAATTGCAAAAATAGGTAGTTTG-TCAGA--T  844
      ||||||||||| |||||||||||||||||   ||||||||| |||||  |
seq2  TTCTGTGACTATTTTTCTTAATTGCAAAATAGGGTAGTTTGTTCAGAATT  850

seq1  ATATC-TCAGTAGCATGTACTGC-TTCAA--TAAAGTAATTGACAATTTA  890
      ||||| ||||||||||||||||| |||||   ||||||||  |||  |||
seq2  ATATCTTCAGTAGCATGTACTGCTTTCAAATAAAAGTAATGAACA--TTA  898

seq1  CAGATCT-ATAAG-ATACTCTGTTTACTCATTT-CATACTTCTC-ATATG  936
      ||||||| ||||| |||||||| |||||||||| |||||| ||| |||||
seq2  CAGATCTAATAAGAATACTCTG-TTACTCATTTCCATACTCCTCAATATG  947

seq1  TTCATGATGAGGTCATCAAAATTTCCCCAACAAAAATATAC-GTTTTC  983
      | ||||||||||||||||||   | ||| |||||||||||| ||||||
seq2  TCCATGATGAGGTCATCAAA---TTCCCGACAAAAATATACGGTTTTC  992