BAC Information

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BAC

Clone NameB6Ng01-241A05
ChromosomeX (Build37)
Map Location 112,393,642 - 112,394,766
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039201, Klhl4, Gm1866, EG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362
Downstream geneLOC100039255, LOC623913, LOC546363, LOC100039277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241A05.bB6Ng01-241A05.g
ACCGA051035GA051036
length1,1851,122
definitionB6Ng01-241A05.b B6Ng01-241A05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaaccacctgaaaaaatg
ttcaacatccttaattatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcataccagtcagaatggctaagatcaaaaattcaggtaacagc
agatgctggcgaggatgtggagaaagaggaacactccttcattgttggtg
ggattgcaagcttttacaatcactctggaaatcagtgtggcggttcctca
gaaaattggacatagtactactggcggatcccgcaatacctctcttgggc
atatatccagaagatgtcccaacttataagaaggacacatgctccaatat
gttcatagcagccttatttataatagccagaagctggaaagaatccagat
gcccctcaacagaggaatggattaaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggtga
atggatggacctggagggcatcatcctgagtgacataacacaatcacaaa
agaactcaaatggtatgtactcactgataagtggatattagcccagaaac
ttagtatacctgagacataagatacaatttacaaaacacatgaaactgaa
gaagaatgaagaccaaagtgtggataccttgcccctttttagaattggaa
acaatcacacatggaaggaattacagagacaaagtttggatctgagacaa
aaggatggaccatctagagactgccatatccagagatccatcccataatt
agcctccaaacaatgacgccattgcatacactagcaagattttgctgaaa
ggatcctgatatagctgtctcttgtgagactctgcaggggcctagcaaac
acataagtagatactcacagtcagctattggatggagcacagcgccccca
aaggagaactagagaaagtatccaaggagctaagagatctgtaacctgta
ggtgcacaacattatgactaaccagtaccaggagctcttgactctagctg
catatgtacgaagaatggcctaagtcgcatcacttggaaggagatgccca
ttggacatgcaaccttattgcctagatacagggaaatgccaagctaatgg
gatgggtggttagggaattggggctatacactaac
gaattcacattatttaccaagaagttatctccaattgataactgttttca
gaaaataaaacagttttccacaatgatttcatgcaaggtatataaaccac
acttacacataggccccatacccagcagaaggggactaacagaaaaagaa
atgtacaggtattttttgtcccatattgttttgcttgggcatgtttttac
cttaccagcttttattgtggattctggtttccaattttgtattttttgac
ttttactttcgtgtgtatgtttctttgtatatatgtgtttctcaggcatc
ttcatgtttttacattattattattggatttttccctatttgttttcaaa
agaaagacaaagaaggcagggaattgaatgactgcagagacagggaatat
gtagagaagaaactatgatcagaatgtagtatgtaaaaatatttttgtaa
ataaataaataaacaaacatattttattttttttccattttttattaggt
atttaactcatttacatttccaatgctataccaaaagtcccccatatcca
cccacccccactcccctgcccacccactccccctttttggccctggtatt
cccctgtactggggcatataaagaacaaacatattttaaaagcttgaaga
aagaaagaaaaaaaaggaggaggcagaatatgccacatgaagtcaaagaa
tggtgcttagaacagattgggaagagaaattggatgtcctcactgacagc
ttgtacctctcagaatgagtccagtcaaaaatatgatgtcaagagtaaca
aataaatgattaaacctcaaaaaatgtaaatcatcagatggatccattat
agagaaataattgaatggaatgtgctatcaaggattaagggaaactaaga
cctagcaatgtgaactatccaaggaaggataaaacatttaaaaataagct
aagttttagggaacttgtgacatggcatgaattgctattttggaaacttc
ccacagaacagccaaagaacttaaaaaatgaaatctggtatcagtatatt
ttgtaatatttcagtagggagtagcaactaacttacatctaggataccag
ttgctaaacacatgaaaactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_112393642_112394766
seq2: B6Ng01-241A05.g_64_1185 (reverse)

seq1  TGAG-TTTCATGTGTTTAGCAAATTGTATCTTAGATGTTAGTTTAGTTTC  49
      |||| ||||||||||||||||| | ||||| ||||||| || |||||| |
seq2  TGAGTTTTCATGTGTTTAGCAACTGGTATCCTAGATGTAAG-TTAGTTGC  49

seq1  TACTTCCCTATTGAAATATTTACAAATATTACTGATA-CAGATTTCATTT  98
      ||| |||||| ||||||| |||||||   |||||||| ||||||||| ||
seq2  TAC-TCCCTACTGAAATA-TTACAAAATATACTGATACCAGATTTCA-TT  96

seq1  TTTTAAGTTTCTTTGGCTGTTCTGTGGGAAGTTTCCAAAAATAGCAA-TC  147
      ||||||| |||||||||||||||||||||||||||| |||||||||| ||
seq2  TTTTAAG-TTCTTTGGCTGTTCTGTGGGAAGTTTCC-AAAATAGCAATTC  144

seq1  ATGCCATGTCACAAGTT-CCTAAAACTTAGCTTATTTTT-AATGTTTTAT  195
      ||||||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  ATGCCATGTCACAAGTTCCCTAAAACTTAGCTTATTTTTAAATGTTTTAT  194

seq1  TCTT-CTTGGATAGTTCACATTGCTAGGTCTTTAGTTT-CCTTAATCCTT  243
       ||| ||||||||||||||||||||||||| ||||||| ||||||||| |
seq2  CCTTCCTTGGATAGTTCACATTGCTAGGTC-TTAGTTTCCCTTAATCC-T  242

seq1  TGATAGCACATTTCCATTTCAATTATTTCTCTATAATGGATCCATCTGAT  293
      |||||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  TGATAGCACA-TTCCA-TTCAATTATTTCTCTATAATGGATCCATCTGAT  290

seq1  GATTTACATTTTTTGAGGTTTAATCATTTATTTGTTACTCTTGACATCAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACATTTTTTGAGGTTTAATCATTTATTTGTTACTCTTGACATCAT  340

seq1  ATTTTTGACTGGACTCATTCTGAGAGGTACAAGCTGTCAGTGAGGACATC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGACTGGACTCATTCTGAGAGGTACAAGCTGTCAGTGAGGACATC  390

seq1  CAATTTCTCTTCCCAATCTGTTCTAAGCACCATTCTTTGACTTCATGTGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCTCTTCCCAATCTGTTCTAAGCACCATTCTTTGACTTCATGTGG  440

seq1  CATATTCTGCCTCCTCCTTTTTTTTCTTTCTTTCTTCAAGCTTTTAAAAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTGCCTCCTCCTTTTTTTTCTTTCTTTCTTCAAGCTTTTAAAAT  490

seq1  ATGTTTGTTCTTTATATGCCCCAGTACAGGGGAATACCAGGGCCAAAAAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGTTCTTTATATGCCCCAGTACAGGGGAATACCAGGGCCAAAAAG  540

seq1  GGGGAGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTTTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTTTT  590

seq1  GGTATAGCATTGGAAATGTAAATGAGTTAAATACCTAATAAAAAATGGAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAGCATTGGAAATGTAAATGAGTTAAATACCTAATAAAAAATGGAA  640

seq1  AAAAAATAAAATATGTTTGTTTATTTATTTATTTACAAAAATATTTTTAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAAAATATGTTTGTTTATTTATTTATTTACAAAAATATTTTTAC  690

seq1  ATACTACATTCTGATCATAGTTTCTTCTCTACATATTCCCTGTCTCTGCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTACATTCTGATCATAGTTTCTTCTCTACATATTCCCTGTCTCTGCA  740

seq1  GTCATTCAATTCCCTGCCTTCTTTGTCTTTCTTTTGAAAACAAATAGGGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCAATTCCCTGCCTTCTTTGTCTTTCTTTTGAAAACAAATAGGGA  790

seq1  AAAATCCAATAATAATAATGTAAAAACATGAAGATGCCTGAGAAACACAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAATAATAATAATGTAAAAACATGAAGATGCCTGAGAAACACAT  840

seq1  ATATACAAAGAAACATACACACGAAAGTAAAAGTCAAAAAATACAAAATT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAAGAAACATACACACGAAAGTAAAAGTCAAAAAATACAAAATT  890

seq1  GGAAACCAGAATCCACAATAAAAGCTGGTAAGGTAAAAACATGCCCAAGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCAGAATCCACAATAAAAGCTGGTAAGGTAAAAACATGCCCAAGC  940

seq1  AAAACAATATGGGACAAAAAATACCTGTACATTTCTTTTTCTGTTAGTCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAATATGGGACAAAAAATACCTGTACATTTCTTTTTCTGTTAGTCC  990

seq1  CCTTCTGCTGGGTATGGGGCCTATGTGTAAGTGTGGTTTATATACCTTGC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGCTGGGTATGGGGCCTATGTGTAAGTGTGGTTTATATACCTTGC  1040

seq1  ATGAAATCATTGTGGAAAACTGTTTTATTTTCTGAAAACAGTTATCAATT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATCATTGTGGAAAACTGTTTTATTTTCTGAAAACAGTTATCAATT  1090

seq1  GGAGATAACTTCTTGGTAAATAATGTGAATTC  1125
      ||||||||||||||||||||||||||||||||
seq2  GGAGATAACTTCTTGGTAAATAATGTGAATTC  1122