BAC Information

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BAC

Clone NameB6Ng01-242E02
ChromosomeX (Build37)
Map Location 112,426,720 - 112,427,816
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039201, Klhl4, Gm1866, EG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362
Downstream geneLOC100039255, LOC623913, LOC546363, LOC100039277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242E02.bB6Ng01-242E02.g
ACCGA051950GA051951
length1,2471,094
definitionB6Ng01-242E02.b B6Ng01-242E02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tactgaactccctctctttagggggagagagccccgggaattttacatca
aagaaaacaatcatagagtagctacttgtttctctactggtgatgaaatt
gtataattgattaagaaaacctgttttattttttcatgcaacatttaaca
actcatatagccagtatcaaagacgttttaccacagtttatgcatactct
ctgcatttattatagatgtgtatggtgactgtaaattacttatacaaact
gctgctgttgactaaaaggcaaagggaatagaacaagttattaaatggtg
tactgtctcaaagaggtcattttaaatcatgattcttgggcattgtttta
aaaagtcagatgtagagaatttattcaagacaagtaggacacattttcta
gcatattgtaaaacttttaatttgttatgtctactactcctccacttaat
ttatttctagagccacattggatacttttacagaccttttgtttgaatgt
tataaggtttggcaagaaaatctatggcggttgtaccatgaaaaacaata
tacaagctcaggtttatccatatctttcaagatttctttgctaatggttg
ttgcatgtagcctcccccagcctgaagcaggctggtgcagatcttgtcac
cactgaggtggggacatctgtggtgcagctttcctatttgactttgctgg
tttcctttgatgtgtcaactgccctgctcttctccaagatcctgctgcct
gctgagacacctttgagaccatccatgttgtgctgtgtcttcgggctagc
tctgggcaccaaggatgaactggactggcagggaggatgggccttgcccc
tttataagcacagtcaattagtaaactcacgggccttgatcagagaaaat
ttgtcttggtttcattcttttctcgccatctagtctctctttcaacccca
agctgcctttcaggagtacccggttcatgtaggccacgggcagcttacaa
ctacagattgggcacctgaaccagggacctaaaaaacagtggggaaacac
tggagggaccactgtcttatgtggagctcaatgagacggaagaataggag
atcgtatcggggcacattgacacaagtatttatgctagccactggtttta
acctccattttaagtattgcttggggtgcgatgaacacaaggctaaggtt
cgaaacgtgactggaacccaagttgcctgaatatctcatcactgaag

gaattctatgagagaaatccaggaggaggagatatctggcatgtaaataa
attaaattaataattactggaaaagaaaagaaggaaatatttaaatgttt
catttttttcttatctaagtgtgtgcttttgcatttttctgtggatattt
tcatataagtgaaggacagaagaaggtataagattccctggagttggaga
tatggagagttggagtcatttggaatgggtgctgggaaaaaatccaggtt
ctgtgaaagagttgtaactgttctgaacttctgagttataatttaatttt
tgcccatgagcatgggcaatctttccattttctgatatctttttcaattt
ctttcttcagagacttgaagttgtttcactttcttggttagagttactcc
aagatatattatattatttgtgactattgtgaagcttgttgtttctctac
attttttctaaacctgtatattatttgtataaaggaaggctactattttt
gtttgtttgttgttgttgttgttgttgttgttgagttaattttacatcca
tccactttgcttaaagtgtttgttagctctgatagattatttgggatcac
ttatgtatacttcctctatcatcagtgaaaagctcatgtctccttcttca
gcatgttctacttgcatgcacccccacacccagcctcccattgaatatga
ggaatcatctcagaaatgggtcaaaaaaaaattaagagtcagaggtagtg
tacctctgcaactaaatatttcctagatacgacaatgctaattgcacaca
tgaagtcgcaacagctatgtctatacacacaaaatatgcctagctaatca
aaatctaagcatggatgggagattgggccttattatacacatgtatgcaa
ttcttaagcaatgaaaattacaaattacctaaaccaaataggctaacatt
gagtgttgtctttgcaaataggtgagatcagctaagcacctggaatcgtc
ctggtgtgatacctttgttctaggctttagttagcaacagagatctggaa
atagtttactctgaaaggaactttgccaggttttcatttgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_112426720_112427816
seq2: B6Ng01-242E02.g_67_1160

seq1  GAATTCTATGAGAGAAATCCAGGAGGAGGAGATATCTGGCATGTAAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGAGAGAAATCCAGGAGGAGGAGATATCTGGCATGTAAATAA  50

seq1  ATTAAATTAATAATTACTGGAAAAGAAAAGAAGGAAATATTTAAATGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTAATAATTACTGGAAAAGAAAAGAAGGAAATATTTAAATGTTT  100

seq1  CATTTTTTTCTTATCTAAGTGTGTGCTTTTGCATTTTTCTGTGGATATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTCTTATCTAAGTGTGTGCTTTTGCATTTTTCTGTGGATATTT  150

seq1  TCATATAAGTGAAGGACAGAAGAAGGTATAAGATTCCCTGGAGTTGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAAGTGAAGGACAGAAGAAGGTATAAGATTCCCTGGAGTTGGAGA  200

seq1  TATGGAGAGTTGGAGTCATTTGGAATGGGTGCTGGGAAAAAATCCAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGAGTTGGAGTCATTTGGAATGGGTGCTGGGAAAAAATCCAGGTT  250

seq1  CTGTGAAAGAGTTGTAACTGTTCTGAACTTCTGAGTTATAATTTAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAAGAGTTGTAACTGTTCTGAACTTCTGAGTTATAATTTAATTTT  300

seq1  TGCCCATGAGCATGGGCAATCTTTCCATTTTCTGATATCTTTTTCAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGAGCATGGGCAATCTTTCCATTTTCTGATATCTTTTTCAATTT  350

seq1  CTTTCTTCAGAGACTTGAAGTTGTTTCACTTTCTTGGTTAGAGTTACTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCAGAGACTTGAAGTTGTTTCACTTTCTTGGTTAGAGTTACTCC  400

seq1  AAGATATATTATATTATTTGTGACTATTGTGAAGCTTGTTGTTTCTCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATATTATATTATTTGTGACTATTGTGAAGCTTGTTGTTTCTCTAC  450

seq1  ATTTTTTCTAAACCTGTATATTATTTGTATAAAGGAAGGCTACTATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCTAAACCTGTATATTATTTGTATAAAGGAAGGCTACTATTTTT  500

seq1  GTTTGTTTGTTGTTGTTGTTGTTGTTGTTGTTGAGTTAATTTTACATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTGTTGTTGTTGTTGTTGTTGTTGAGTTAATTTTACATCCA  550

seq1  TCCACTTTGCTTAAAGTGTTTGTTAGCTCTGATAGATTATTTGGGATCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTGCTTAAAGTGTTTGTTAGCTCTGATAGATTATTTGGGATCAC  600

seq1  TTATGTATACTTCCTCTATCATCAGTGAAAAGCTCATGTCTCCTTCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTATACTTCCTCTATCATCAGTGAAAAGCTCATGTCTCCTTCTTCA  650

seq1  GCATGTTCTACTTGCATGCACCCCCACACCCAGCCTCCCATTGAATATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTCTACTTGCATGCACCCCCACACCCAGCCTCCCATTGAATATGA  700

seq1  GGAATCATCTCAGAAATGGGTCAAAAAAAAATTAAGAGTCAGAGGTAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCATCTCAGAAATGGGTCAAAAAAAAATTAAGAGTCAGAGGTAGTG  750

seq1  TACCTCTGCAACTAAATATTTCCTAGATACGACAATGCTAATTGCACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTGCAACTAAATATTTCCTAGATACGACAATGCTAATTGCACACA  800

seq1  TGAAGTCGCAACAGCTATGTCTATACACACAAAATATGCCTAGCTAATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCGCAACAGCTATGTCTATACACACAAAATATGCCTAGCTAATCA  850

seq1  AAATCTAAGCATGGATGGGAGATTGG--CCTATTATACACATGTATGCAA  898
      ||||||||||||||||||||||||||  | ||||||||||||||||||||
seq2  AAATCTAAGCATGGATGGGAGATTGGGCCTTATTATACACATGTATGCAA  900

seq1  TTCTTAAGCAATGAAAATTACAAATTACCTAAACCAAATAGGCTAACATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAGCAATGAAAATTACAAATTACCTAAACCAAATAGGCTAACATT  950

seq1  GAGGTGTTGTC-TTGCAAATAGGTGAGAATCAGCTAAAGCACCTGGAAAT  997
      || |||||||| ||||||||||||||| ||||||| |||||||||| |||
seq2  GA-GTGTTGTCTTTGCAAATAGGTGAG-ATCAGCT-AAGCACCTGG-AAT  996

seq1  CGTCCTTGTGTTGATACCTTTGTTCTAAGCTTTTAGTTAGCAAACAGAGA  1047
      |||||| ||| |||||||||||||||| || |||||||||| ||||||||
seq2  CGTCCTGGTG-TGATACCTTTGTTCTAGGC-TTTAGTTAGC-AACAGAGA  1043

seq1  TCT-GAAATAGTTTACTCTGACAGAAATTTTGCCAGGTTTTCATTTGTTT  1096
      ||| ||||||||||||||||| || || ||||||||||||||||||||||
seq2  TCTGGAAATAGTTTACTCTGAAAGGAACTTTGCCAGGTTTTCATTTGTTT  1093

seq1  T  1097
      |
seq2  T  1094


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