MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-244J12
Chromosome	X (Build37)	2 (Build37)
Map Location	121,247,192 - 121,248,948	181,729,252 - 181,730,086
singlet/doublet	singlet	singlet
Overlap gene	LOC100038940, LOC100038941, EG625699, LOC100038942
Upstream gene	3110007F17Rik, LOC100039751, LOC100039763, LOC665281, EG625591, LOC665325, EG382265, LOC665364, EG546368
Downstream gene	LOC100039828, EG434843, EG665463, EG665522, LOC100038969, LOC100038978
Link	Open Mouse BAC browser

Click to get alignment info.

name	3110007F17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73061 MGI:1920311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 160 ESTs, 5 Proteins pseudo : _no_value

name	LOC100039763 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein

name	LOC665281 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 145 ESTs, 5 Proteins pseudo : _no_value

name	EG625591 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625591 MGI:3644765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein

name	LOC665325 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 107 ESTs, 5 Proteins pseudo : _no_value

name	EG382265 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382265 MGI:3645501
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 1 Protein

name	LOC665364 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 226 ESTs, 5 Proteins pseudo : _no_value

name	EG546368 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546368 MGI:3646000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein

name	LOC100038940 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100038941 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625699 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625699 MGI:3643045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038942 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039828 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039828
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 821 ESTs, 7 Proteins

name	EG434843 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434843 MGI:3646126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 981 ESTs, 7 Proteins

name	EG665463 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665463 MGI:3646874
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 981 ESTs, 7 Proteins

name	EG665522 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665522 MGI:3645463
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 983 ESTs, 7 Proteins

name	LOC100038969 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 823 ESTs, 7 Proteins

name	LOC100038978 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038978
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 813 ESTs, 7 Proteins

name	3110007F17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625949 GeneID:73061 MGI:1920311
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110007F17 gene transcript_id : NM_028426.1

name	LOC100039763 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272163 GeneID:100039763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein product : similar to RIKEN cDNA 3110007F17 gene transcript_id : XM_001473145.1

name	EG625591 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408138 GeneID:625591 MGI:3644765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein product : predicted gene, EG625591 transcript_id : XM_621081.3

name	EG382265 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408141 GeneID:382265 MGI:3645501
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 1 Protein product : predicted gene, EG382265 transcript_id : XM_356374.4

name	EG546368 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408144 GeneID:546368 MGI:3646000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein product : predicted gene, EG546368 transcript_id : XM_621082.3

name	LOC100038940 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272123 GeneID:100038940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100038940, transcript variant 1 transcript_id : XM_001471631.1

name	LOC100038940 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272125 GeneID:100038940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100038940, transcript variant 2 transcript_id : XM_001471633.1

name	LOC100038941 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272127 GeneID:100038941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100038941 transcript_id : XM_001471636.1

name	EG625699 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272129 GeneID:625699 MGI:3643045
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG625699 transcript_id : XM_890269.2

name	LOC100038942 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272131 GeneID:100038942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100038942 transcript_id : XM_001471635.1

name	LOC100039828 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272168 GeneID:100039828
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 820 ESTs, 7 Proteins product : similar to 40S ribosomal protein S12, transcript variant 1 transcript_id : XM_001473276.1

name	LOC100039828 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272170 GeneID:100039828
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 402 ESTs, 7 Proteins product : similar to 40S ribosomal protein S12, transcript variant 2 transcript_id : XM_001473295.1

name	EG434843 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272172 GeneID:434843 MGI:3646126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 981 ESTs, 7 Proteins product : predicted gene, EG434843 transcript_id : XM_486761.4

name	EG665463 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272173 GeneID:665463 MGI:3646874
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 981 ESTs, 7 Proteins product : predicted gene, EG665463 transcript_id : XM_977110.2

name	EG665522 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272221 GeneID:665522 MGI:3645463
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 983 ESTs, 7 Proteins product : predicted gene, EG665522 transcript_id : XM_977540.2

name	LOC100038969 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272224 GeneID:100038969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 404 ESTs, 7 Proteins product : similar to 40S ribosomal protein S12, transcript variant 2 transcript_id : XM_001472037.1

name	LOC100038969 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272226 GeneID:100038969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 483 ESTs, 7 Proteins product : similar to 40S ribosomal protein S12, transcript variant 3 transcript_id : XM_001472061.1

name	LOC100038969 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272222 GeneID:100038969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 821 ESTs, 7 Proteins product : similar to 40S ribosomal protein S12, transcript variant 1 transcript_id : XM_001472007.1

name	LOC100038978 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272228 GeneID:100038978
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 812 ESTs, 7 Proteins product : similar to 40S ribosomal protein S12, transcript variant 1 transcript_id : XM_001472084.1

name	LOC100038978 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272230 GeneID:100038978
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 401 ESTs, 7 Proteins product : similar to 40S ribosomal protein S12, transcript variant 2 transcript_id : XM_001472119.1

name	3110007F17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625950 GeneID:73061 MGI:1920311
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence IEA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC73061 protein_id : NP_082702.1

name	LOC100039763 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272164 GeneID:100039763
definition	codon_start : 1 product : similar to RIKEN cDNA 3110007F17 gene protein_id : XP_001473195.1

name	EG625591 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63748758 GeneID:625591 MGI:3644765
definition	codon_start : 1 product : similar to RIKEN cDNA 3110007F17 gene protein_id : XP_621081.1

name	EG382265 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38087252 GeneID:382265 MGI:3645501
definition	codon_start : 1 product : similar to RIKEN cDNA 3110007F17 gene protein_id : XP_356374.1

name	EG546368 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63748772 GeneID:546368 MGI:3646000
definition	codon_start : 1 product : similar to RIKEN cDNA 3110007F17 gene protein_id : XP_621082.1

name	LOC100038940 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272124 GeneID:100038940
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001471681.1

name	LOC100038940 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272126 GeneID:100038940
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001471683.1

name	LOC100038942 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272132 GeneID:100038942
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001471685.1

name	LOC100038941 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272128 GeneID:100038941
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001471686.1

name	EG625699 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272130 GeneID:625699 MGI:3643045
definition	codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein protein_id : XP_895362.2

name	LOC100039828 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272169 GeneID:100039828
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 1 protein_id : XP_001473326.1

name	LOC100039828 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272171 GeneID:100039828
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 2 protein_id : XP_001473345.1

name	EG434843 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51772387 GeneID:434843 MGI:3646126
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 protein_id : XP_486761.1

name	EG665463 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94408152 GeneID:665463 MGI:3646874
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 protein_id : XP_982204.1

name	EG665522 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94408225 GeneID:665522 MGI:3645463
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 protein_id : XP_982634.1

name	LOC100038969 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272223 GeneID:100038969
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 1 protein_id : XP_001472057.1

name	LOC100038969 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272225 GeneID:100038969
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 2 protein_id : XP_001472087.1

name	LOC100038969 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272227 GeneID:100038969
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 3 protein_id : XP_001472111.1

name	LOC100038978 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272229 GeneID:100038978
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 1 protein_id : XP_001472134.1

name	LOC100038978 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272231 GeneID:100038978
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 2 protein_id : XP_001472169.1

name	LOC100039751 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272162 GeneID:100039751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 160 ESTs, 5 Proteins product : similar to 40S ribosomal protein S12 pseudo : _no_value transcript_id : XR_031048.1

name	LOC665281 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272165 GeneID:665281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 145 ESTs, 5 Proteins product : similar to 40S ribosomal protein S12 pseudo : _no_value transcript_id : XR_031065.1

name	LOC665325 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272166 GeneID:665325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 107 ESTs, 5 Proteins product : similar to 40S ribosomal protein S12 pseudo : _no_value transcript_id : XR_031083.1

name	LOC665364 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272167 GeneID:665364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 226 ESTs, 5 Proteins product : similar to 40S ribosomal protein S12 pseudo : _no_value transcript_id : XR_031105.1

clone name	MSMg01-368K24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-366H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-472B08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-271I22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-177J21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-212I16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-231H04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-480B14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495H15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-149I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057O18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-294B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412C08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-390J19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-373A22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-335J15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-421M07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-534L05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-114N01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-052J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-099F13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-318M09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-073G15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-073P20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-110P02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-155I04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-205H24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-328M16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-341J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-395F16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-404J20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-461O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-085H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-500G07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-379K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181F21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-336J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288I08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-528D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140C13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368G08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-471M11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-519H08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-533N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536L01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-323N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111G09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-070N15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-439H08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-181N12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-500M22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-461M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368K04
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-044N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150P17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-244J12.b	B6Ng01-244J12.g
ACC	GA053688	GA053689
length	1,156	1,015
definition	B6Ng01-244J12.b	B6Ng01-244J12.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(121,247,192 - 121,248,948)	(181,729,252 - 181,730,086)
sequence	gaattcacaattccctcctttgtctagaactcaatatgaagagactgcat cgttgcctatattcaattgtctgccaacgcctcatgtatgatcatgcatc taaatgttttcataaaagtgttacctaattctggtttccaacagatgaac atgcattgtttcattgaaatatttgtatatgtgttggtctactatacctg gttatatgtataactttacttatatacttgtgaatatacatatactttgc tttatataatagtctttaaatgagccttttcctgcaattctgaatttgat actggatgtggaaaaataatgctagtctcctattctgttaccagaataat ctttttattcaattacacaaatgcacaagcacagattaggcttattatca ctgtcagatacaaggtcaatatttctattgattactcaataaatttaaca ttatttagtagttaatatatattcacaattcctttccactcatcctatgt cttgtgccctgaatacatagggaaaattctggccttagtctctacatctg aggtctgaaaagataaatctaggagaatcattgtacttcttgcggaaaag aacctgttctcaatgtgggtattaggtctgagtttgaaagagtgagatgt tatcatttgtggctgaaaattatgagggaacgagtgttgaaacttttttt tttttacaaaatagaaatagtaagaacacactaaaaggtaacattaactt gatgtgtacaacaccctaaagaatagtattctggtcatatgatatattgt gtcattgtgtatatatatcttgaaatggattaaaaaaattaaataacata tatcttaaaataattagtctggctgggcggtggtggctcacgcctttaat ccccgcacttgggaggcagatttagcattatctcatattggcaaacctta cagtatttggaaatttcatatttcaaacatctcccttatcatcactatgc cttcttttagaatagcagcaagtaatattgagcttcttctggtaattgtt ttttgctactgatggagatcaacagaatccttatcctttaacccgacatg acttgaatgttctccaatcatgctgaaactgtcattgattattggaagct ggatca	gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg tcgaatgctttttcggcatctaacgagatgatcaggtagtttttgtcttt gagtttgtttatatagtggattacgttgttggatttccgtatattaaacc atccctgcatccctggaatattcaataatattaagatgtttgatgtataa attgaatttaaataaaaattataaggggaatctgttaggtttttcatatg tagtgtaagtcatactcttttatatatctgtggaattacatctccaagat tattttatagcagtcttacacaataagactgtaatttagttcaaggatgg cattcagcaataaaacaatgtttatttattttcatgaaaacgaaatatat tctatcatagttcacaatgtctatgaattcttaaattgtatttgtcttta agatccctaatatatgagaattatttcaagacatttagacagaaattttg tatatcttatattacaaactactgcagttgaaattttatatttcaaacat ctcccttaatcatcactttgccttgttttagaattacagcaagtgaatat gagtttcttctggtaatgttttttgcttctgatgagatcaacaagaatcc ttatcttttacccaacataactttgatattcaacattgttggtggaaact gtcatgatttattgaaaaatctggatcaagcttatacacaaataaatgga cgtatgaattttgtaaattatttctgttatttagatgacttatgtgacat aggccttacaggaccatcatggaaaacatcctttaaaactggcaatggac tcttcaatgccaatggtaagattatgtgaccactgaatgggttaattaaa tttaaattatatttacaggtgcctagaatgaaacctgaacagaaagcatt ttgtgagtatgctgctacacacacacacacacacacacacacacacacac gtgtttatatatata
quality values	Open. Hide. 58 33 32 26 58 31 19 40 29 58 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 47 62 62 62 56 62 47 44 30 38 46 47 49 37 62 62 62 62 59 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 44 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58 58 54 50 58 58 58 54 58 58 58 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 52 58 52 58 58 58 58 58 58 58 58 51 53 58 58 58 58 58 43 41 48 58 58 51 58 58 51 58 58 51 58 52 58 58 58 58 46 29 51 51 58 58 58 58 58 58 58 50 46 42 51 58 54 58 58 58 54 54 58 58 31 58 41 40 54 49 54 58 58 53 50 54 58 58 54 58 58 58 54 58 35 49 41 33 41 31 58 49 40 58 58 58 58 53 53 54 53 52 58 51 58 42 54 58 46 52 52 49 50 52 35 41 50 53 58 54 58 25 58 58 51 54 58 36 49 52 58 29 51 58 51 39 39 29 47 34 40 39 47 53 39 49 54 54 51 49 54 50 34 52 49 49 54 54 40 37 45 45 49 53 52 32 54 44 41 44 34 31 49 32 53 53 28 53 49 45 54 40 42 40 54 54 54 54 54 54 54 54 54 54 53 31 41 18 54 54 41 42 37 33 52 54 44 35 39 37 33 34 46 39 54 44 42 34 44 26 46 41 30 54 54 40 31 46 13 32 52 35 24 35 53 45 32 32 33 52 52 39 33 52 31 32 28 29 27 8 37 34 31 18 33 40 39 31 52 53 39 52 34 29 45 32 31 42 25 31 45 33 30 46 23 31 32 34 31 31 39 42 25 39 39 31 32 31 46 31 51 30 31 29 30 40 45 32 51 32 39 30 30 31 31 32 30 31 42 31 33 37 33 48 42 29 31 31 9 19 38 37 48 47 46 47 46 30 24 33 31 46 27 31 25 29 26 29 31 28 25 25 31 36 32 37 36 46 46 30 26 21 31 32 22 35 38 33 32 31 27 31 20 31 28 47 25 10 10 5 5 29 31 21 31 28 24 28 31 24 31 31 33 26 31 48 37 16 24 18 37 44 41 24 31 32 14 27 19 21 30 43 27 26 11 38 17 19 21 42 14 48 42 28 35 27 22 21 9 18 25 31 25 32 33 31 20 13 38 16 24 11 26 39 15 25 14 37 18 26 32 28 33 23 19 26 39 31 10 11 32 43 26 7 47 30 32 15 19 19 34 48 27 27 31 39 28 22 15 18 11 10 12 37 12 5 22 11 18 22 22 27 21 21 28 10 6 12 19 18 7 12 12 28 19 38 33 26 28 11 25 19 14 11 11 27 23 16 21 14 11 16 16 23 12 3 7 7 12 19 19 6 27 26 27 27 10 14 13 19 13 22 8 19 14 8 5 6 7 47 40 38 38 19 27 25 6 5 18 17 28 25 6 15 8 9 8 19 20 10 23 4 5 12 6 11 15 7 5 18 8 14 6 6 7 5 10 17 15 4 8 17 25 17 4 11 6 6 13 16 15 6 15 11 16 10 7 5 6 9 4 7 12 9 20 5 5 14 14 15 22 7 1 1 3 3 9 7 14 5 8 9 11 10 5 8 9 5 3 5 4 15 9 4 2 3 2 4 2 2 7 8 3 8 17 14	Open. Hide. 62 47 33 41 62 62 62 62 62 47 54 56 32 32 32 46 15 9 43 56 47 62 62 62 62 44 62 62 47 47 62 62 49 49 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 52 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 58 58 54 48 58 58 58 49 58 58 58 58 58 54 54 58 52 58 58 58 58 58 54 54 54 54 58 54 48 58 58 58 51 58 58 58 58 58 54 54 58 58 58 58 58 52 54 58 58 54 54 54 54 58 58 58 47 52 58 58 54 47 58 58 58 58 58 54 58 54 54 52 52 58 46 54 54 50 49 58 58 58 58 58 58 58 53 58 54 58 58 51 58 40 58 54 47 47 50 49 43 58 51 53 53 53 53 58 58 50 50 50 51 52 58 50 58 58 51 53 53 39 47 50 58 58 40 50 53 35 49 23 58 58 58 58 58 49 51 58 58 53 53 51 36 24 49 51 46 42 50 40 50 54 39 48 50 39 36 38 50 41 51 40 51 47 39 50 50 58 58 53 41 40 41 44 37 49 50 42 52 34 50 50 58 58 58 49 32 32 31 38 58 42 45 38 34 37 39 41 52 45 49 52 53 39 49 46 32 54 30 30 41 52 47 49 24 41 42 39 29 54 53 34 29 51 52 37 54 54 54 23 30 45 52 50 44 30 45 40 37 31 42 42 53 53 42 37 29 53 37 44 23 51 45 52 52 54 35 33 54 33 42 34 42 41 37 38 38 53 40 37 54 54 54 46 31 52 53 34 28 32 40 34 53 52 40 40 53 22 42 31 42 53 40 37 32 28 27 28 31 22 33 53 30 23 41 34 31 34 28 25 31 37 35 46 24 32 51 17 24 30 30 33 36 31 23 27 19 37 31 30 16 31 32 32 46 46 26 28 17 31 22 33 23 46 24 31 42 46 27 28 30 43 30 23 19 46 26 31 35 14 12 31 31 43 31 29 15 7 15 27 26 31 25 30 26 32 46 16 32 25 17 22 6 37 21 20 27 15 26 32 21 7 9 27 31 37 37 32 30 46 46 30 20 6 26 41 11 12 46 33 30 9 41 33 12 46 12 24 24 20 20 25 22 47 27 21 32 11 26 13 25 34 28 28 32 33 23 12 8 4 9 8 28 23 13 8 30 19 19 16 21 13 13 31 38 24 15 11 24 28 39 34 16 11 6 9 32 13 9 11 21 23 32 34 32 32 26 17 21 17 20 23 21 30 30 14 26 22 27 9 17 14 27 22 21 10 14 14 10 7 14 19 11 14 21 21 21 15 7 6 6 7 6 5 3 24 8 10 5 5 6 7 10 6 7 4

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_121247192_121248948
seq2: B6Ng01-244J12.b_46_1201 (reverse)

seq1  TGATCCAGACTTCTCAATAAATCATGACAGTTTCCACCAATGA-TGGAGA  49
      |||||||| |||| ||||||   |||||||||||  |  |||| ||||||
seq2  TGATCCAG-CTTC-CAATAATCAATGACAGTTTCAGC--ATGATTGGAGA  46

seq1  ACATCAAAGTCATGTTGGG-TAAAAGATAAGAATTCTTGTTGAT-TTCAT  97
      ||||  ||||||||| ||| |||| |||||| |||| ||||||| | |||
seq2  ACATTCAAGTCATGTCGGGTTAAAGGATAAGGATTC-TGTTGATCTCCAT  95

seq1  CAGTAGCAAAAAA-GATTACCAGAAGAAGCTC-ATATTCACTTGCTGCAA  145
      |||||||||||||  ||||||||||||||||| ||||| ||||||||| |
seq2  CAGTAGCAAAAAACAATTACCAGAAGAAGCTCAATATT-ACTTGCTGCTA  144

seq1  TTCTAAAAGAAGGCATAGTGATGATAAGGGAGATGTTTGAAATATAAAAT  195
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTCTAAAAGAAGGCATAGTGATGATAAGGGAGATGTTTGAAATATGAAAT  194

seq1  TT-GAAATACTGTAAGGTTTG-TAATATGAGAT-ATACTAAATCTGCCCC  242
      ||  |||||||||||||||||  |||||||||| || ||||||||||| |
seq2  TTCCAAATACTGTAAGGTTTGCCAATATGAGATAATGCTAAATCTGCCTC  244

seq1  CCAAGTGCAGGGATTAAAGGCATGAGCAACCACTGCTCAGCCAGACTAAT  292
      |||||||| |||||||||||| ||||| ||||| || |||||||||||||
seq2  CCAAGTGCGGGGATTAAAGGCGTGAGCCACCACCGCCCAGCCAGACTAAT  294

seq1  CATTTTAAGATATACTTTATTTAATTTTATTCATCCATTTCAAG----TT  338
       |||||||||||||  |||||||||||| || ||||||||||||     |
seq2  TATTTTAAGATATATGTTATTTAATTTTTTTAATCCATTTCAAGATATAT  344

seq1  ATACACAATGATACAATATACCATATGACCAGAATATTATCCTTTAGGGA  388
      ||||||||||| |||||||| ||||||||||||||| ||| |||||||| 
seq2  ATACACAATGACACAATATATCATATGACCAGAATACTATTCTTTAGGGT  394

seq1  ATTGTACACATCAAGTTAATGTTACCTTGTAGTGTGTTCTTACTATTTCT  438
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTTGTACACATCAAGTTAATGTTACCTTTTAGTGTGTTCTTACTATTTCT  444

seq1  ATTTTGTAAAAAGAAAAAAAAAATCAGATTTCTTTTAATACCTCTGTCTT  488
      |||||||||||| ||||||                               
seq2  ATTTTGTAAAAAAAAAAAA-------------------------------  463

seq1  CCTAATTCTTTGAGACCCTTTAAGTGATGTCTGAGCACAGAGATCTTCTC  538
                                                        
seq2  --------------------------------------------------  463

seq1  TGCCCCAGCACAGTTGGCAGTTCATCTGCTATTACTCTCTATTTACTCTC  588
                                                        
seq2  --------------------------------------------------  463

seq1  TTCAGGAGTAAAGCCACCAAACATCATCTTTTGCTAAAATTTGTAATTTT  638
                                                        
seq2  --------------------------------------------------  463

seq1  CAATTAAGCGTTCATTGCTAAGTTTTTCTTTCTAATCCAAAAAATTATAT  688
                                                        
seq2  --------------------------------------------------  463

seq1  TGACACAGTTCACAAATTTGTAATTTTAAAACTTATCATGGCTTAAACAA  738
                                                        
seq2  --------------------------------------------------  463

seq1  TTGTCACCAATGAGAATTATCACAATTTTTGCAATGAAATCACAATTTTT  788
                                                        
seq2  --------------------------------------------------  463

seq1  GCAATGAAAAATGAAAAATGAAATGTGGGAAAATTCAGAATACATCAGAA  838
                                                        
seq2  --------------------------------------------------  463

seq1  ATAAAATTCCTACTCACCTAACAGAGAAGGATAATAATGTGAAGCAACCA  888
                                                        
seq2  --------------------------------------------------  463

seq1  TCACTATCAGAGGGTACAGTGTACTGTGGCTACCAATTGAAAAAATGTAT  938
                                                        
seq2  --------------------------------------------------  463

seq1  TCCTTTTTTCCCAAAGACATGAAAATTTAATAAGAGATGAGATGACAGCC  988
                                                        
seq2  --------------------------------------------------  463

seq1  AAAGACAGAAAAGCAAAAGAAACCTTGGTTTATGAAAGAAAGAAGTCGCA  1038
                                                        
seq2  --------------------------------------------------  463

seq1  GGCACATTGATTAGCGGAAAGGTAAATTATTTCAACACTTGTTCCCTCAT  1088
                                   |||||||||| ||||||||||
seq2  ----------------------------GTTTCAACACTCGTTCCCTCAT  485

seq1  GATCTGCAGCCACAAATGATAACATCTCACACTTTCAATCTCAAACCTAA  1138
       || | |||||||||||||||||||||||| ||||||| |||| ||||||
seq2  AATTTTCAGCCACAAATGATAACATCTCACTCTTTCAAACTCAGACCTAA  535

seq1  TAGCCACATTGAGAACAGGTTCTTTTCCACAAGAAGTACAATGATTCTCC  1188
      || ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TACCCACATTGAGAACAGGTTCTTTTCCGCAAGAAGTACAATGATTCTCC  585

seq1  TAGATTTACCTTTTTAGACCTCAGATGTAGAGATTAAGGGCAGAATTTTC  1238
      |||||||| ||||| |||||||||||||||||| ||||| ||||||||||
seq2  TAGATTTATCTTTTCAGACCTCAGATGTAGAGACTAAGGCCAGAATTTTC  635

seq1  CTTATGTATCCAGGGCACATGACTTAGGATGAATGGAAAGGAATTGTGAA  1288
      | ||||||| ||||||||| ||| |||||||| |||||||||||||||||
seq2  CCTATGTATTCAGGGCACAAGACATAGGATGAGTGGAAAGGAATTGTGAA  685

seq1  TATATATTAACTACTAAATAATGTTGAATTTATTGAGTAAGTAAGAGAAA  1338
      ||||||||||||||||||||||||| ||||||||||||||  || |||||
seq2  TATATATTAACTACTAAATAATGTTAAATTTATTGAGTAATCAATAGAAA  735

seq1  TATTGACCATCTATCTGATAGTGATAATAAGCCTAATCTATGCCTGTGCA  1388
      |||||||| | ||||||| |||||||||||||||||||| ||| ||||||
seq2  TATTGACCTTGTATCTGACAGTGATAATAAGCCTAATCTGTGCTTGTGCA  785

seq1  TTTGTGTAATTGGAT--AAAGATTATTCTAGTAACAGAATATGAGACAAG  1436
      |||||||||||| ||  |||||||||||| ||||||||||| ||||| ||
seq2  TTTGTGTAATTGAATAAAAAGATTATTCTGGTAACAGAATAGGAGACTAG  835

seq1  CATTCTTTTTCCACATTCAGTATCAAATCCAGAATTGCAATATGAGGCTC  1486
      |||| ||||||||||| ||||||||||| ||||||||||  |  ||||||
seq2  CATTATTTTTCCACATCCAGTATCAAATTCAGAATTGCAGGAAAAGGCTC  885

seq1  ATTTAAAGACTATTTTATAAAGCAAAGTATATATATATTCACAAGTATAT  1536
      |||||||||||||| ||||||||||||||||| |||||||||||||||||
seq2  ATTTAAAGACTATTATATAAAGCAAAGTATATGTATATTCACAAGTATAT  935

seq1  AAGTAATGTTGTACATTTAACCAGGTATAGTAGACCAACACATTCACAAA  1586
      |||||| ||| ||||| ||||||||||||||||||||||||||  |||||
seq2  AAGTAAAGTTATACATATAACCAGGTATAGTAGACCAACACATATACAAA  985

seq1  TATTTCAATGAAACAATGCATGTTCATCTGTTGGAAACCAGAATTAGGTA  1636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAATGAAACAATGCATGTTCATCTGTTGGAAACCAGAATTAGGTA  1035

seq1  ACACTTTCATGAAGGCATTTAGATGCATGATCATACATGAGGTGTTGGCA  1686
      ||||||| |||||  ||||||||||||||||||||||||||| |||||||
seq2  ACACTTTTATGAAAACATTTAGATGCATGATCATACATGAGGCGTTGGCA  1085

seq1  GACAATTGAATATAGGCAGGGATGCAGTCTCTTCATATTGAATTCTTGAC  1736
      ||||||||||||||||||  ||||||||||||||||||||| |||| |||
seq2  GACAATTGAATATAGGCAACGATGCAGTCTCTTCATATTGAGTTCTAGAC  1135

seq1  AAAGTAGGGGATTGTGAATTC  1757
      |||| |||| |||||||||||
seq2  AAAGGAGGGAATTGTGAATTC  1156

seq1: chr2_181729252_181730086
seq2: B6Ng01-244J12.g_233_1081

seq1  AATATTCAATAATATTAAGATGTTTGATGTATAAAATGCATTTAAATAAT  50
      ||||||||||||||||||||||||||||||||||| || ||||||||   
seq2  AATATTCAATAATATTAAGATGTTTGATGTATAAATTGAATTTAAAT---  47

seq1  AAAAAATTATAAGGAGAATCTGTTATGTATTTCATATGTAGTTTAAATCA  100
       ||||||||||||| |||||||||| || ||||||||||||| ||| |||
seq2  -AAAAATTATAAGGGGAATCTGTTAGGTTTTTCATATGTAGTGTAAGTCA  96

seq1  TGCTCTTT--TATGTCTGTGGAATTACAACTCCAAG-----------GCA  137
      | ||||||  ||| |||||||||||||| |||||||           |||
seq2  TACTCTTTTATATATCTGTGGAATTACATCTCCAAGATTATTTTATAGCA  146

seq1  GTCTTACTCAATAGGACTGTAATCTAGTTCAGGGATGGCATTCAGAGATA  187
      ||||||| ||||| ||||||||| ||||||| |||||||||||||  |||
seq2  GTCTTACACAATAAGACTGTAATTTAGTTCAAGGATGGCATTCAGCAATA  196

seq1  AAACAATCTTTATTGATTTTCATGAATACAAAAATGTATCATATCGTAGT  237
      ||||||| |||||| ||||||||||| ||  |||| |||  |||| ||||
seq2  AAACAATGTTTATTTATTTTCATGAAAAC-GAAATATATTCTATCATAGT  245

seq1  GTCCAATGTCTATGAATTCTTAAATTGTATTTGGCTCTAAAGATCCCTAA  287
         |||||||||||||||||||||||||||||| || | |||||||||||
seq2  TCACAATGTCTATGAATTCTTAAATTGTATTTGTCT-TTAAGATCCCTAA  294

seq1  TATATGAGGTTTATTTCAAGTCATTTAGACAGAAGTTTAGTATATCTCAT  337
      ||||||||  |||||||||| ||||||||||||| ||| |||||||| ||
seq2  TATATGAGAATTATTTCAAGACATTTAGACAGAAATTTTGTATATCTTAT  344

seq1  ATTACAAACTTTACTCCAGTTGAAATTTTATATTTCTAACATCTCCCTTA  387
      |||||||||  |||| |||||||||||||||||||| |||||||||||||
seq2  ATTACAAAC--TACTGCAGTTGAAATTTTATATTTCAAACATCTCCCTTA  392

seq1  ATTATCGCTATGCCTTGTTTTAGAATTGCAGCAAGTGAATATGAGATTCT  437
      || ||| || ||||||||||||||||| ||||||||||||||||| ||||
seq2  ATCATCACTTTGCCTTGTTTTAGAATTACAGCAAGTGAATATGAGTTTCT  442

seq1  TCTGATAATGTTTTTTGCTACTGATGAGATCAACAAGAATCCTTATCTTT  487
      |||| |||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCTGGTAATGTTTTTTGCTTCTGATGAGATCAACAAGAATCCTTATCTTT  492

seq1  TACCCAACATAACTTTGATATTCACCATCATTGGTGGTCACTGTCATGAT  537
      |||||||||||||||||||||||| |||  |||||||  |||||||||||
seq2  TACCCAACATAACTTTGATATTCAACATTGTTGGTGGAAACTGTCATGAT  542

seq1  TTATTGGGAGGTCTGGATGAAGCATATACACAAATAAATGGACGTGTGAA  587
      ||||||  |  ||||||| |||| ||||||||||||||||||||| ||||
seq2  TTATTGAAAAATCTGGATCAAGCTTATACACAAATAAATGGACGTATGAA  592

seq1  GTTTGTTAATTATTTCTGTTATTCAGATGATTCATGTCTCATTGGCCTTA  637
       ||||| |||||||||||||||| |||||| | ||||  ||| |||||||
seq2  TTTTGTAAATTATTTCTGTTATTTAGATGACTTATGTGACATAGGCCTTA  642

seq1  CAGGACCATCATGGAAAACATCC-TTAAAACTGGCAATGGATTCTTCGAT  686
      ||||||||||||||||||||||| ||||||||||||||||| ||||| ||
seq2  CAGGACCATCATGGAAAACATCCTTTAAAACTGGCAATGGACTCTTCAAT  692

seq1  GCCAATGGTAAGAATATGTGA-CACTGAATGGGTTAA-GAACATTAAATT  734
      ||||||||||||| ||||||| |||||||||||||||  ||  |||||||
seq2  GCCAATGGTAAGATTATGTGACCACTGAATGGGTTAATTAAATTTAAATT  742

seq1  ATATTTACAGGTGCCTACAAGAAAACTTGAATAGAATGCA-TTTATGAGT  783
      ||||||||||||||||| ||  |||| |||| |||| ||| ||| |||||
seq2  ATATTTACAGGTGCCTAGAATGAAACCTGAACAGAAAGCATTTTGTGAGT  792

seq1  GTGCTTCTATACACACACACACACACACACACACACAC-----TAATTAT  828
       |||| ||| ||||||||||||||||||||||||||||     |  ||||
seq2  ATGCTGCTACACACACACACACACACACACACACACACACACGTGTTTAT  842

seq1  ATATATA  835
      |||||||
seq2  ATATATA  849

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Alignment Information