BAC Information

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BAC

Clone NameB6Ng01-245F09
ChromosomeX (Build37)
Map Location 45,459,293 - 45,460,377
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434775, LOC236775, LOC100040133, LOC100040145, EG624187, Smarca1, LOC676253, Ocrl, LOC270596, LOC665672, Apln
Downstream geneXpnpep2, 1200013B08Rik, Zdhhc9, Utp14a, LOC637576, Bcorl1, Elf4, Aifm1, Rab33a, Suhw3, Slc25a14, Gpr119, Rbmx2, LOC665752, Gm595, EG637758, LOC100040295, Enox2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245F09.bB6Ng01-245F09.g
ACCGA054245GA054246
length1,1841,083
definitionB6Ng01-245F09.b B6Ng01-245F09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattcaggtcctcacgctcgagtcatagactagctaattgagctgctt
ctgttgactgatgaattggttatttgtcattatgaaatgcttctccctac
ctctgatccctgattatactctcgtgttgaagtatattatacctatgcct
taattaatatagccagtgcctttgatacatttattgcttatattgcttag
cactttttagttttactttcaatgcatctctctatatatttaaagggcat
attttttattctattgaatatcagactcaggacttcatccatactaaaca
agctatcaaccattgaatttgtgagagtttgaatgggattggcccctata
gacttatttgtttgaatacttggtcctcagttggcgacactatttggtag
gattaggaggtttggctttagttggaggagatatgacactgggggcaggc
tttgaggcttcaaacccctagctatccccagtgcactctctgcttcctgc
ttgtggttcgagatgtgagctctcagcttgcagtttcagctgtcctgtct
gctgtttcccaacccctatggacactcatctctctggtgccataagtcca
aataagttcctccttccataagttaactcggtcaagatgtttttatcata
acaacagaaaagtaactaacatacctgttaaaatatagtcttcttagaag
ggggaacaacatacccatggaaggagttacagagacaaagtgtggagcag
agactgaaggaacagccattcagagactgccccacctagggatccatccc
atagacaaccaccaaacccagacactactgtctatgccaacaagagcttg
ttgacaggagcctgatatagctgtctcctgagaggctctgccagtgcctg
acaaatacagaggtagatgctcacagcccatccattggaatggagcacag
ggttccccaatgaaagaagctagaagaaaggacccaagagctgaaggggt
tgcagccccataggagaaaacaacatatggaactaacagtacccccagaa
gttccttggactaatcactaccaagaaaaacaacaatggcgggactcatg
ctcagctgcaatatgtagcaaggatgctagttgtatatgagaagtcttgt
ctgtaaagtttaattgccccccagtatatagaga
gaattcttttttttgtcatttgtttgttctgaggcagaaaggacagatcc
tgatcagaagtcgggatggtgaggaaaaaagcaatggaggcatggtggaa
agagactctctctgcaaagcaacttctccaatgtcaggacttagccttta
gtgttgaggccttaggtccagcaaaagcagaagtaaactgtctacgcagc
cacgggggtactgcagagtgtgactcatgggtttccaaacagctttgata
caaaggacccttggccagtcaccctgcctatcttcaatcagtgctttcca
cttcaggactgttgccaacatttgaggtcaagtccccaaaaggatgagag
caaagacagtagtttctcgataaggagataaggaaggaactgagggtaca
ggcatgtgaggtcattgttaccaccaaggccaagtcaaggtcccagggga
tggaagtggaaggcttaagtactaagcagagacatcccaggacagagttc
agaaggtgaaggcaggatgcctgggttgttggattgcttttgaaacatag
gtctcactgaggtttactgttgtagcaataactgccatttcagcaatgtt
ggtgccagggacagaaaggacaaagtgtagttgagacttgctttgctgct
ggtgaagcatgcccatgaacaagcacaaagcctttgggctttgctctgtc
aggcagctgctttataaggacagattaccccactgatgctctgctccttg
tcgaaccaggctgtcatgtttcagtaacagcatgttacaggtaaagaaac
tgagggctcagagaggtgaaatcaacgcccaaaggccacacagatgaccg
tagacagtaactgtccccgaaaggctatctctgcatgaacccgtgcttgt
cctgtgaggtatttgctccagcctaaacaggaggtgagtgcctttgagtg
gccatttcctctatcctccgatttctgggaaattacgtcttcacagtcat
ggaagggtggggaaagaggggacaggatgagggggagacagagcttggca
gtcatggatgacacagagttcttctcccagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_45459293_45460377
seq2: B6Ng01-245F09.g_67_1149

seq1  GAATTCTTTTTTTTGTCATTTGTTTGTTCTGAGGCAGAAAGGACAGATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTTGTCATTTGTTTGTTCTGAGGCAGAAAGGACAGATCC  50

seq1  TGATCAGAAGTCGGGATGGTGAGGAAAAAAGCAATGGAGGCATGGTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGAAGTCGGGATGGTGAGGAAAAAAGCAATGGAGGCATGGTGGAA  100

seq1  AGAGACTCTCTCTGCAAAGCAACTTCTCCAATGTCAGGACTTAGCCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTCTCTCTGCAAAGCAACTTCTCCAATGTCAGGACTTAGCCTTTA  150

seq1  GTGTTGAGGCCTTAGGTCCAGCAAAAGCAGAAGTAAACTGTCTACGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAGGCCTTAGGTCCAGCAAAAGCAGAAGTAAACTGTCTACGCAGC  200

seq1  CACGGGGGTACTGCAGAGTGTGACTCATGGGTTTCCAAACAGCTTTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGGGGTACTGCAGAGTGTGACTCATGGGTTTCCAAACAGCTTTGATA  250

seq1  CAAAGGACCCTTGGCCAGTCACCCTGCCTATCTTCAATCAGTGCTTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGACCCTTGGCCAGTCACCCTGCCTATCTTCAATCAGTGCTTTCCA  300

seq1  CTTCAGGACTGTTGCCAACATTTGAGGTCAAGTCCCCAAAAGGATGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGACTGTTGCCAACATTTGAGGTCAAGTCCCCAAAAGGATGAGAG  350

seq1  CAAAGACAGTAGTTTCTCGATAAGGAGATAAGGAAGGAACTGAGGGTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACAGTAGTTTCTCGATAAGGAGATAAGGAAGGAACTGAGGGTACA  400

seq1  GGCATGTGAGGTCATTGTTACCACCAAGGCCAAGTCAAGGTCCCAGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTGAGGTCATTGTTACCACCAAGGCCAAGTCAAGGTCCCAGGGGA  450

seq1  TGGAAGTGGAAGGCTTAAGTACTAAGCAGAGACATCCCAGGACAGAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTGGAAGGCTTAAGTACTAAGCAGAGACATCCCAGGACAGAGTTC  500

seq1  AGAAGGTGAAGGCAGGATGCCTGGGTTGTTGGATTGCTTTTGAAACATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGAAGGCAGGATGCCTGGGTTGTTGGATTGCTTTTGAAACATAG  550

seq1  GTCTCACTGAGGTTTACTGTTGTAGCAATAACTGCCATTTCAGCAATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACTGAGGTTTACTGTTGTAGCAATAACTGCCATTTCAGCAATGTT  600

seq1  GGTGCCAGGGACAGAAAGGACAAAGTGTAGTTGAGACTTGCTTTGCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCAGGGACAGAAAGGACAAAGTGTAGTTGAGACTTGCTTTGCTGCT  650

seq1  GGTGAAGCATGCCCATGAACAAGCACAAAGCCTTTGGGCTTTGCTCTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGCATGCCCATGAACAAGCACAAAGCCTTTGGGCTTTGCTCTGTC  700

seq1  AGGCAGCTGCTTTATAAGGACAGATTACCCCACTGATGCTCTGCTCCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTGCTTTATAAGGACAGATTACCCCACTGATGCTCTGCTCCTTG  750

seq1  TCGAACCAGGCTGTCATGTTTCAGTAACAGCATGTTACAGGTAAAGAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACCAGGCTGTCATGTTTCAGTAACAGCATGTTACAGGTAAAGAAAC  800

seq1  TGAGGGCTCAGAGAGGTGAAATCAACGCCC-AAGGCCACACAGATGACCG  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGAGGGCTCAGAGAGGTGAAATCAACGCCCAAAGGCCACACAGATGACCG  850

seq1  TAGACAGTAACTGTCCCCGAAAGGCTATCTCTGCATGAACCCGTGCTTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGTAACTGTCCCCGAAAGGCTATCTCTGCATGAACCCGTGCTTGT  900

seq1  CCTGTGAGGTATTTGCTCCAGCCTAAACAGGAGGTGAGTGCCTTTGAGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAGGTATTTGCTCCAGCCTAAACAGGAGGTGAGTGCCTTTGAGTG  950

seq1  GCCATTTCCTCTATCCTCCGATTTCTGGG-AATTACGTCTTCACCAGTCA  998
      ||||||||||||||||||||||||||||| ||||||||||||| ||||||
seq2  GCCATTTCCTCTATCCTCCGATTTCTGGGAAATTACGTCTTCA-CAGTCA  999

seq1  TGGAAAGGGTGGGAAAGAGGGGACAGGATGGAGGGGAAGACAAGAGCTTT  1048
      ||||| ||  ||||||||||||||||||| |||||| |||| ||||| ||
seq2  TGGAAGGGTGGGGAAAGAGGGGACAGGAT-GAGGGGGAGAC-AGAGC-TT  1046

seq1  GGCAGTCATGGAATGACACAGAGTTC-TCTCCCAGTTC  1085
      ||||||||||| |||||||||||||| |||||||||||
seq2  GGCAGTCATGG-ATGACACAGAGTTCTTCTCCCAGTTC  1083