BAC Information

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BAC

Clone NameB6Ng01-245H18
ChromosomeX (Build37)
Map Location 30,925,127 - 30,926,251
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039467, LOC100039481, LOC100039224, LOC100039500, LOC100040448, LOC100040458, LOC100040467, EG546176, LOC100040482, LOC629997, 1700017G21Rik, LOC665014, EG546205
Downstream geneLOC100040533, LOC100039328, LOC100040552, LOC100040575, LOC100040585, LOC100039362, LOC100040606, LOC100040612, LOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722, LOC100040732
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245H18.bB6Ng01-245H18.g
ACCGA054355GA054356
length9321,116
definitionB6Ng01-245H18.b B6Ng01-245H18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaactgaagtgaaaacataccataccaaatatcatggagcacaat
taaaacagcattaagtaaagaatccaaagcactaaatgccttcctaaaga
aatttcaagagatcttatacaagcgagttaaaagcacacctaaaagctct
agaacagaaagaagcaaagtgcaccaaagaagagtagatgtcagaatgtt
ggaggctcagggctgaaatcaaccagggagaaacaaagagaatgatacaa
agaatcaacaaaaccaagagctagtttttaaagaaaatcaacaagatata
tatgatatacccttagccaagctaactaaagggcacagagacagtatgca
aattaacaaaatcagaaatgaaaaggagacataacaacagaatctgagga
aatttaaaaaatcagctgaagctactacaaaagcctttagctctaataaa
ctgaaaaatctagatggctttctgtactaaagtgaaatcaaggtcaggca
aattatctaaacagtcctatatttcctaaggaaatacatagaggtatcaa
aaatcttccaatcaaaaagcctgacagttttagtgcagaattctaccagt
ccacaaaatagaaacaaaaggaacactacctatcttattctatgaagcca
caattactctgataggtaaaatcacacaaagacccaacaaagaacaagaa
cttcagaccaatcttgcctatggatattttttggagaccatactgtgaga
aaggaagtctttcgcagcttcccatcctaataagccaaatggccttgtgt
taaggagctggtcgcctcctcctccctatctcatgctggcaccaaagacc
ctaaaaagactgaattatccctatctcttcctgactcccaagacttctaa
ggacatgagttatgtgctgagcccagcctgaa
gaattctttcctttctaacaactggccaccatacatctcttaatatcttc
tattgtcttagagaagcagggctatctctggaacgctattactcttatga
ctttcatctctgtttgaattgcaacatagttcaacatgaagccatagttg
tgtttcaaaggaaaatagaatgcattttacatgtttataactatttgaga
tacagacacactaatcataaaagatggaggtcaaatatctcttttatagt
tgtcaaaacacaaattggactacctgccttctgtaccttcttccacatgc
agaggataactgtaaaacaccttgggaaaaaaacttaaaggtttattgca
tgcccaactcttctcaaccttattaatggagaaaaatattgacagatatg
atttattgaaatatgaattttattggacaatggcgatacataatttgtgg
ctagagaaaatatgattttacttggcacagctagtaaattgaataccata
ccaaagcccaattttaaatggattatagtttatggagtaaatacttaaaa
tactgtttaattcggtagacttttgaggtcaactgtgaactccccactta
tctcaactcagaaagcaaaaacatatattgaaagatgttggaccctcatc
aaatggggccgtaacacttctgacttcctgataatcttcctgtctccatt
gcaaagaaagtttcaccataagagaagataaataaactcgcttgtttaaa
gggaacttttaaaaagtgagtatatgaggctggaagttgtggagcagcct
ttaatctcattactaaggaggcagaagaaagaatatctctgagttcaagc
acagcctaatctacagagagtaacaggccagaactggctatttagtgaga
ccttgtctcaagaaaataataataatgagtatatgaatactgtttcttta
actaaaaagaaaaactcaaaattttaaaaaaatattaggtagaatatgtc
agacctctttctttcttttttattggatatttatttatttacattcaatg
ttatctccttcatgattcccctggaaacccctattccattctccctcctc
cctgctctatgagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_30925127_30926251
seq2: B6Ng01-245H18.g_68_1183

seq1  GAATTCTTTCCTTTCTAACAACTGGCCACCATACATCTCTTAATATCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTTTCTAACAACTGGCCACCATACATCTCTTAATATCTTC  50

seq1  TATTGTCTTAGAGAAGCAGGGCTATCTCTGGAACGCTATTACTCTTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCTTAGAGAAGCAGGGCTATCTCTGGAACGCTATTACTCTTATGA  100

seq1  CTTTCATCTCTGTTTGAATTGCAACATAGTTCAACATGAAGCCATAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATCTCTGTTTGAATTGCAACATAGTTCAACATGAAGCCATAGTTG  150

seq1  TGTTTCAAAGGAAAATAGAATGCATTTTACATGTTTATAACTATTTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAAAGGAAAATAGAATGCATTTTACATGTTTATAACTATTTGAGA  200

seq1  TACAGACACACTAATCATAAAAGATGGAGGTCAAATATCTCTTTTATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACACACTAATCATAAAAGATGGAGGTCAAATATCTCTTTTATAGT  250

seq1  TGTCAAAACACAAATTGGACTACCTGCCTTCTGTACCTTCTTCCACATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAACACAAATTGGACTACCTGCCTTCTGTACCTTCTTCCACATGC  300

seq1  AGAGGATAACTGTAAAACACCTTGGGAAAAAAACTTAAAGGTTTATTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATAACTGTAAAACACCTTGGGAAAAAAACTTAAAGGTTTATTGCA  350

seq1  TGCCCAACTCTTCTCAACCTTATTAATGGAGAAAAATATTGACAGATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAACTCTTCTCAACCTTATTAATGGAGAAAAATATTGACAGATATG  400

seq1  ATTTATTGAAATATGAATTTTATTGGACAATGGCGATACATAATTTGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTGAAATATGAATTTTATTGGACAATGGCGATACATAATTTGTGG  450

seq1  CTAGAGAAAATATGATTTTACTTGGCACAGCTAGTAAATTGAATACCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAAATATGATTTTACTTGGCACAGCTAGTAAATTGAATACCATA  500

seq1  CCAAAGCCCAATTTTAAATGGATTATAGTTTATGGAGTAAATACTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCCCAATTTTAAATGGATTATAGTTTATGGAGTAAATACTTAAAA  550

seq1  TACTGTTTAATTCGGTAGACTTTTGAGGTCAACTGTGAACTCCCCACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTAATTCGGTAGACTTTTGAGGTCAACTGTGAACTCCCCACTTA  600

seq1  TCTCAACTCAGAAAGCAAAAACATATATTGAAAGATGTTGGACCCTCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACTCAGAAAGCAAAAACATATATTGAAAGATGTTGGACCCTCATC  650

seq1  AAATGGGGCCGTAACACTTCTGACTTCCTGATAATCTTCCTGTCTCCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGGCCGTAACACTTCTGACTTCCTGATAATCTTCCTGTCTCCATT  700

seq1  GCAAAGAAAGTTTCACCATAAGAGAAGATAAATAAACTCGCTTGTTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAAAGTTTCACCATAAGAGAAGATAAATAAACTCGCTTGTTTAAA  750

seq1  GGGAACTTTTAAAAAGTGAGTATATGAGGCTGGAAGTTGTGGAGCAGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTTTTAAAAAGTGAGTATATGAGGCTGGAAGTTGTGGAGCAGCCT  800

seq1  TTAATCTCATTACTAAGGAGGCAGAAGAAAGAATATCTCTGAGTTCAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCATTACTAAGGAGGCAGAAGAAAGAATATCTCTGAGTTCAAGC  850

seq1  ACAGCCTAATCTACAGAGAGTAACAGGCCAGAACTGGCTATTTAGTGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTAATCTACAGAGAGTAACAGGCCAGAACTGGCTATTTAGTGAGA  900

seq1  CCTTGTCTCAAGAAAATAATAATAATGAGTATATGAATACTGTTTCTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCTCAAGAAAATAATAATAATGAGTATATGAATACTGTTTCTTTA  950

seq1  ACTAAAAAAGAAAAACTCAAAATTTTAAAAAAAATATTAGGTAGAATATG  1000
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACT-AAAAAGAAAAACTCAAAATTTT-AAAAAAATATTAGGTAGAATATG  998

seq1  TCAGACCTCCTTTCTTTC-TTTTTATTGGATATTTTATTTATTTACATTT  1049
      |||||||| ||||||||| ||||||||||||| |||||||||||||||| 
seq2  TCAGACCT-CTTTCTTTCTTTTTTATTGGATA-TTTATTTATTTACATT-  1045

seq1  CAAATGTTATCTCCTTTCATGGTTTCCCCCTGGAAACCCCCTATTCCATC  1099
        |||||||||||| |||||| ||  |||||||||| |||||||||||| 
seq2  -CAATGTTATCTCC-TTCATGATT--CCCCTGGAAA-CCCCTATTCCATT  1090

seq1  CTCCCT-CTCCCTGCTTCTATGAGGGT  1125
      |||||| |||||||| |||||||||||
seq2  CTCCCTCCTCCCTGC-TCTATGAGGGT  1116