BAC Information

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BAC

Clone NameB6Ng01-246O21
ChromosomeX (Build37)
Map Location 112,417,267 - 112,418,380
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039201, Klhl4, Gm1866, EG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362
Downstream geneLOC100039255, LOC623913, LOC546363, LOC100039277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246O21.bB6Ng01-246O21.g
ACCGA055405GA055406
length1,1011,199
definitionB6Ng01-246O21.b B6Ng01-246O21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaaatcctataatataaaatgttttcttctgcacaattttca
aagtcagatcattcagaatatattgagaatggtaaaaagattatttttct
ttctgtttaatgtaggaagagggatgaataaaacatacttcccactattg
atcagaacaaaaccagtaaaatattttgttgtgctcactgagatttgagt
catatctttgttgtaaattcactgcttagtaagatattcatcttttctga
gtcttaaaatgctgttatcaacaacacatgatagaaattattatttcttg
tagacagagcagctgtgaaagcagaggaagtgataatagttctcattgaa
tgctgactggtgtagacaatgtcctaaagattttacatggattactttct
ttattcctgatgagaaacaaattagatattatgtactatgttaaaaataa
tgaaatggatttcaaaactctgcttcatattaaaaaaaaatttccacttg
gcttttgaatattacattgtctaaaattatgatcattttgttgtaacctt
taaaatccctttcatccttcaatgctcaattcaaatactattctcttcat
ccaacaaacaaccaaacaaaacaaagcaaatgaacaaacaaaaaaaaaaa
gagaaagaaaatctctttaaactgtactaaatgagtccataccttatcca
ctgtctcttaaaacagtgcttagaaaccttagcgttcaacatagtttatg
caatatgttagatagtacatgaaagtttccaaactttatgaaatgtataa
tcaaaagaaataatgtctgattttttgatgaaataaacttgcttattttg
actattaaattctaagtggctgccaattgaagacatcaaaaaataataca
tcataatttttaccatgtttattaaataaaacacgtactccatcactctg
tctttctcccagtttcaaataattattcaaacacatgtcttgatttccag
agggcatgtttagattagctacaataaatactcacataatcaggtatacg
agctaatctattagttagttctctatactacaacaatatctgaactggaa
a
gaattccagggagtcttttatacttttgggtcagttgctctgttgccctg
tggtgcaatgaaccacctgggaggccttcagactatggtgtcttcagagg
agcagagaggctgatgatctgcctcagcagaagtactggcctgaagggga
gtggaattcagggggcatggtttggtccaattgcactgggatcctcagga
ttcccatctgctgtggctgtttggaagggtaccttacaagttaccttgca
taaagcagaccttctgggaggcctacagactgtgagatcatcagaggagc
agccaagccagaaagggagtggctataggcatacaagaagcttaaagatc
accaaatatattagacaaaaaataaatgtactaaacaaagaaagaatatt
aaagcatgcaagggtaaaacggcaagtaacatagatacagatcaatcaga
attacaaatgattttttaacagacacagaaagtcagaaggatgtgtgcaa
atgttttgaaaactctaagagatcacagatgtcaagccagaccactatac
agaacaaaactttctataaccagagaaagagaacacaaggtattctagga
caaaaccaaatttaaacaatatctatccacaaattcagtcttacaaaaga
tactagaaggaaaagttccacccaagcaagataactacatccaagaaaac
acaggaaacaaatatggaccagcaaaagcaaaggaacacacacatggaca
caaaagcatacacatccatacatgcacactttacacacacacacacacac
acacacacacacaatgtcaacaacatcaaactaataggaatttaccaaac
attggtcattagtattttctaaatttcaatggatacaatttccttctaat
aaaaaagacacaagctaactgaatggatgcttcaactgcggcataatagg
aaaataggcctattaagcttctaagtaaataagaagcaagtcattaaagt
tcttttcaaaaaatagtccaggaataagtactttcaccacacaatgccaa
agaaagagcctaagactcaaatattttctcaactattccactttagaatc
aaagaccaaaaccattggccaagtctcccaaatggaatccacagtcaatg
gtaaatatggtaatccaacctcaagataccagaaaaggaaagatagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_112417267_112418380
seq2: B6Ng01-246O21.b_47_1147

seq1  GAATTCAGGAAATCCTATAATATAAAATGTTTTCTTCTGCACAATTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAATCCTATAATATAAAATGTTTTCTTCTGCACAATTTTCA  50

seq1  AAGTCAGATCATTCAGAATATATTGAGAATGGTAAAAAGATTATTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGATCATTCAGAATATATTGAGAATGGTAAAAAGATTATTTTTCT  100

seq1  TTCTGTTTAATGTAGGAAGAGGGATGAATAAAACATACTTCCCACTATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTAATGTAGGAAGAGGGATGAATAAAACATACTTCCCACTATTG  150

seq1  ATCAGAACAAAACCAGTAAAATATTTTGTTGTGCTCACTGAGATTTGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAACAAAACCAGTAAAATATTTTGTTGTGCTCACTGAGATTTGAGT  200

seq1  CATATCTTTGTTGTAAATTCACTGCTTAGTAAGATATTCATCTTTTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTTTGTTGTAAATTCACTGCTTAGTAAGATATTCATCTTTTCTGA  250

seq1  GTCTTAAAATGCTGTTATCAACAACACATGATAGAAATTATTATTTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAAATGCTGTTATCAACAACACATGATAGAAATTATTATTTCTTG  300

seq1  TAGACAGAGCAGCTGTGAAAGCAGAGGAAGTGATAATAGTTCTCATTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGAGCAGCTGTGAAAGCAGAGGAAGTGATAATAGTTCTCATTGAA  350

seq1  TGCTGACTGGTGTAGACAATGTCCTAAAGATTTTACATGGATTACTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACTGGTGTAGACAATGTCCTAAAGATTTTACATGGATTACTTTCT  400

seq1  TTATTCCTGATGAGAAACAAATTAGATATTATGTACTATGTTAAAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCTGATGAGAAACAAATTAGATATTATGTACTATGTTAAAAATAA  450

seq1  TGAAATGGATTTCAAAACTCTGCTTCATATTAAAAAAAAATTTCCACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGGATTTCAAAACTCTGCTTCATATTAAAAAAAAATTTCCACTTG  500

seq1  GCTTTTGAATATTACATTGTCTAAAATTATGATCATTTTGTTGTAACCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGAATATTACATTGTCTAAAATTATGATCATTTTGTTGTAACCTT  550

seq1  TAAAATCCCTTTCATCCTTCAATGCTCAATTCAAATACTATTCTCTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCCTTTCATCCTTCAATGCTCAATTCAAATACTATTCTCTTCAT  600

seq1  CCAACAAACAACCAAACAAAACAAAGCAAATGAACAAACAAAAAAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAACAACCAAACAAAACAAAGCAAATGAACAAACAAAAAAAAAAA  650

seq1  GAGAAAGAAAATCTCTTTAAACTGTACTAAATGAGTCCATACCTTATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAAAATCTCTTTAAACTGTACTAAATGAGTCCATACCTTATCCA  700

seq1  CTGTCTCTTAAAACAGTGCTTAGAAACCTTAGCGTTCAACATAGTTTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTTAAAACAGTGCTTAGAAACCTTAGCGTTCAACATAGTTTATG  750

seq1  CAATATGTTAGATAGTACATGAAAGTTTCCAAACTTTATGAAATGTATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGTTAGATAGTACATGAAAGTTTCCAAACTTTATGAAATGTATAA  800

seq1  TCAAAAGAAATAATGTCTGATTTTTTGATGAAATAAACTTGCTTATTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGAAATAATGTCTGATTTTTTGATGAAATAAACTTGCTTATTTTG  850

seq1  ACTATTAAATTCTAAGTGGCTGCCAATTGAAGACATCAAAAAATAATACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAAATTCTAAGTGGCTGCCAATTGAAGACATCAAAAAATAATACA  900

seq1  TCATAATTTTTACCATGTTTATTAAATAAAACACGTACTCCATCACTCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTTTTACCATGTTTATTAAATAAAACACGTACTCCATCACTCTG  950

seq1  TCTTTCTCCCAGTTTCAAATAATTATTCAAAACACATGTTCTTGATTTCC  1000
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  TCTTTCTCCCAGTTTCAAATAATTATTC-AAACACATG-TCTTGATTTCC  998

seq1  AGAGGGCATGTTTTAGGATTAGCTAACCAATAAAATAACTCACATTAATC  1050
      |||||||||||||   |||||||||  |||||||   ||||||| |||||
seq2  AGAGGGCATGTTT--AGATTAGCTA--CAATAAA--TACTCACA-TAATC  1041

seq1  AAGGTATTACAGAGTTTATCTATTAGTTAGTTCTCTTATTACTACAACAA  1100
       ||||| ||| ||| | |||||||||||||||||||   |||||||||||
seq2  -AGGTA-TAC-GAGCTAATCTATTAGTTAGTTCTCT--ATACTACAACAA  1086

seq1  TATCTG-ACTGGAAA  1114
      |||||| ||||||||
seq2  TATCTGAACTGGAAA  1101