BAC Information

Click to search

BAC

Clone NameB6Ng01-247G14
ChromosomeX (Build37)
Map Location 42,230,842 - 42,231,463
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC637141, Wdr40c, Wdr40b, LOC665585
Downstream gene1110059M19Rik, LOC100040038, EG385346
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247G14.bB6Ng01-247G14.g
ACCGA055753GA055754
length1,216622
definitionB6Ng01-247G14.b B6Ng01-247G14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatagcgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaattcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctagaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaatggcacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
acccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtaccactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttcctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggccctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
attgaggagctagagaaagtagccaaggagctaaagggatctgcacccta
taggtggaaccaccattatgaacttaccagtaccccggagcttctgactc
tagctgcatattatatccaaagatgggcctagtcggcatcactggaaaga
agagtccattgggacttgcaaactttatattgccccagttacagtgaact
caagctaaaaaggggggattgggttggtcaggagcgaaactgtctgcgcg
cgtcgtgctccctact

gaattcactgcctatgcctctgatgtgctgaaattccatatgtgttccac
catggctggcttcaattaagtcttcttatatctttattattcttttctgg
atatatattttttggagctacattacaaaagtatatacctttttaaattt
tagtaatgctcttataatcatatatattttcaaatatagcatcaaattaa
ttgattctttaattcatcataatttttacttcataatttgttaatattgt
gaatgtactgaaatgcaacgttagtgagttattttacgtttctttccaaa
atcttgcagctttgaaacacaatcctatttccataaaatatatcatgatc
tttcaaaaaatattgtcttatgatttctttttatgtttatcagtgtttat
aagtattttgttggagaagtccagaagaaaatattgcatcccctggaact
aaagttccagaggattgtaaattgtcatgtgtgcaccggacattgaaacc
aggtcctctggaagagtatacaatgtgcttaatcactgcaatcatatcaa
tcatatatgtcatttttgttgtcctaggattttggtttggtttggtttgg
tttggtttggtttggtttggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_42230842_42231463
seq2: B6Ng01-247G14.g_69_690 (reverse)

seq1  AACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAAATCCTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAAATCCTAGG  50

seq1  ACAACAAAAATGACATATATGATTGATATGATTGCAGTGATTAAGCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAAAATGACATATATGATTGATATGATTGCAGTGATTAAGCACAT  100

seq1  TGTATACTCTTCCAGAGGACCTGGTTTCAATGTCCGGTGCACACATGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACTCTTCCAGAGGACCTGGTTTCAATGTCCGGTGCACACATGACA  150

seq1  ATTTACAATCCTCTGGAACTTTAGTTCCAGGGGATGCAATATTTTCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAATCCTCTGGAACTTTAGTTCCAGGGGATGCAATATTTTCTTCT  200

seq1  GGACTTCTCCAACAAAATACTTATAAACACTGATAAACATAAAAAGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCTCCAACAAAATACTTATAAACACTGATAAACATAAAAAGAAAT  250

seq1  CATAAGACAATATTTTTTGAAAGATCATGATATATTTTATGGAAATAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGACAATATTTTTTGAAAGATCATGATATATTTTATGGAAATAGGA  300

seq1  TTGTGTTTCAAAGCTGCAAGATTTTGGAAAGAAACGTAAAATAACTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTCAAAGCTGCAAGATTTTGGAAAGAAACGTAAAATAACTCACT  350

seq1  AACGTTGCATTTCAGTACATTCACAATATTAACAAATTATGAAGTAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTGCATTTCAGTACATTCACAATATTAACAAATTATGAAGTAAAAA  400

seq1  TTATGATGAATTAAAGAATCAATTAATTTGATGCTATATTTGAAAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATGAATTAAAGAATCAATTAATTTGATGCTATATTTGAAAATATA  450

seq1  TATGATTATAAGAGCATTACTAAAATTTAAAAAGGTATATACTTTTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTATAAGAGCATTACTAAAATTTAAAAAGGTATATACTTTTGTAA  500

seq1  TGTAGCTCCAAAAAATATATATCCAGAAAAGAATAATAAAGATATAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTCCAAAAAATATATATCCAGAAAAGAATAATAAAGATATAAGAA  550

seq1  GACTTAATTGAAGCCAGCCATGGTGGAACACATATGGAATTTCAGCACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAATTGAAGCCAGCCATGGTGGAACACATATGGAATTTCAGCACAT  600

seq1  CAGAGGCATAGGCAGTGAATTC  622
      ||||||||||||||||||||||
seq2  CAGAGGCATAGGCAGTGAATTC  622


| Home | SequenceCutter | Blast | Download |