BAC Information

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BAC

Clone NameB6Ng01-251C21
Chromosome13 (Build37)X (Build37)
Map Location 118,118,737 - 118,119,247111,863,490 - 111,863,582
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG668276, Gm280, LOC100041169, Parp8, LOC668288, LOC623312, Emb
Downstream geneEG623365, LOC382807, Hcn1, LOC100041695, LOC674926
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251C21.bB6Ng01-251C21.g
ACCGA058517GA058518
length501743
definitionB6Ng01-251C21.b B6Ng01-251C21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(118,118,737 - 118,119,247)(111,863,490 - 111,863,582)
sequence
tttttccatcctttcattcctcctatccatctatctatctatctatctat
ctatctatctatctatctatctatctatctatctatctatctatctgaga
ctggatctctttatgtggttgtgcctattctgaaactcattatgtcctgg
aactcactgtatagatcaggctgatctcaaatatatgaagatcagccttc
ctatacctccagagttcagagattaaaggtgtgtgccacaaccacctagt
tcattttaggtgttttcttgctttttccctctttcccctctttcccctct
tttcctttcctttccctttctctttccctttccctttccctttcccttcc
cctttcccttttccctttcccttcccctttcccttttccctttccctttc
ctttctctttttctctttcgttctctctttctctctttctcctctcctct
cccctccctccctccctccctccctccctccctaactccctccctccctc
c

gaattcaaatggatttatacaactttgtatatttacactcttcacaaaac
aactccaaatggatcaaagtcctctaccagatacactgaacatgacagaa
aaagaaaaagtaggacataatcttgagctcactagaattggaaaagcctt
tctgaaaaaaaataccattagcatagacactaagatcaacaattaataaa
ttaatcttgagaaactggaaaggttctgcaatgtaaataatgctgccatt
gagggggaaagtggcagccaacagagtaagatgagatttttaccaattat
acatacaatagagcactgatataaaaaatatataaagaactcaagaaatt
agataccacagaaacaaaacctaaatagagtgtcccttttttttttttga
aagattttccaatttttggaatattggttattttattggatattttattt
atttacatttcaaatgttcccctttcctggtttcccctttgcaaattccc
tatcactctccctcacacacttaacctgcttctatgagggttctttccaa
ctcacctacccacccctacttccccatcctggcattcctctacactgggg
cattgagccttcacaggaccaagggcctctcctcccattgatacttggtc
ggccatcagtggaaagagaggcccattagtcttgcagactttatatgcct
cagtacaagggaaagccagggccaagaggtgggagtgggtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118118737_118119247
seq2: B6Ng01-251C21.b_43_549

seq1  GAATTCTTTTTCCATCCTTTCATTCCTCCTATCCATCTATCTATCTATCT  50
      ||||||||||||||||||||||||||||||||||    ||||||||||||
seq2  GAATTCTTTTTCCATCCTTTCATTCCTCCTATCC----ATCTATCTATCT  46

seq1  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  96

seq1  CTATCTGAGACTGGATCTCTTTATGTGGTTGTGCCTATTCTGAAACTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGAGACTGGATCTCTTTATGTGGTTGTGCCTATTCTGAAACTCAT  146

seq1  TATGTCCTGGAACTCACTGTATAGATCAGGCTGATCTCAAATATATGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCTGGAACTCACTGTATAGATCAGGCTGATCTCAAATATATGAAG  196

seq1  ATCAGCCTTCCTATACCTCCAGAGTTCAGAGATTAAAGGTGTGTGCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCTTCCTATACCTCCAGAGTTCAGAGATTAAAGGTGTGTGCCACA  246

seq1  ACCACCTAGTTCATTTTAGGTGTTTTCTTGCTTTTTCCCTCTTTCCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTAGTTCATTTTAGGTGTTTTCTTGCTTTTTCCCTCTTTCCCCTC  296

seq1  TTTCCCCTCTTTTCCTTTCCTTTCCCTTTCTCTTTCCCTTTCCCTTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTCTTTTCCTTTCCTTTCCCTTTCTCTTTCCCTTTCCCTTTCCC  346

seq1  TTTCCCTTCCCCTTTCCCTTTTCCCTTTCCCTTCCCCTTTCCCTTTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTCCCCTTTCCCTTTTCCCTTTCCCTTCCCCTTTCCCTTTTCCC  396

seq1  TTTCCCTTTCCTTTCTCTTTTTCTCTTTCGTTCTCTCTTTCTCTCTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTTCCTTTCTCTTTTTCTCTTTCGTTCTCTCTTTCTCTCTTTCT  446

seq1  CCTCTCCTCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC  500
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  CCTCTCCTCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAACTCCC  496

seq1  TCCCTCCCTCC  511
      |||||||||||
seq2  TCCCTCCCTCC  507


seq1: chrX_111863490_111863582
seq2: B6Ng01-251C21.g_717_809

seq1  GGCCATCAGTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCCT  50
      ||||||||||||||||||||||||||| |||||||| |||||||||||||
seq2  GGCCATCAGTGGAAAGAGAGGCCCATTAGTCTTGCAGACTTTATATGCCT  50

seq1  CAGTACAGGAGAACACCAGGGCCAAGAAGTGAGAGTGGGTAGG  93
      ||||||| | |||  |||||||||||| ||| |||||||||||
seq2  CAGTACAAGGGAAAGCCAGGGCCAAGAGGTGGGAGTGGGTAGG  93


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