BAC Information

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BAC

Clone NameB6Ng01-252G14
ChromosomeX (Build37)
Map Location 150,772,659 - 150,773,803
singlet/doubletsinglet
Overlap gene4930524N10Rik
Upstream geneKlf8, EG635136, Ubqln2, Cypt3, LOC100039998, LOC667241, Kctd12b, 2210013O21Rik, Smt3h1-ps, Spin2, 4921511M17Rik, OTTMUSG00000019268, LOC625650, LOC100040020, EG546397, OTTMUSG00000019256, EG434874, LOC635580, EG625767, LOC270665, LOC100040076
Downstream geneEG434879, LOC667313, 4930542N07Rik, EG434881, LOC100040899, LOC667331, LOC100040925, LOC100040937, Magea6, Magea3, LOC626034, Magea8, Magea2, Magea5, Magea1, 1700042B14Rik, LOC245676, Amd-ps1, LOC667369, Sat1, Acot9, LOC667383, Prdx4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252G14.bB6Ng01-252G14.g
ACCGA059414GA059415
length9681,138
definitionB6Ng01-252G14.b B6Ng01-252G14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaccttttttgaggcctaatgaaatccttaatatgtgtattgta
tggtgtaaatacatcggttactcagcatcatcataactcagttctcccaa
catatcaggacctggagaccagaacacacctaaaaagcaagatttttttt
tttttaattaggtattttcttcctttacatttccaatgctatcccaaaag
tcccccatagcccatcccccactcccctacccacctactcccacttcttg
gccctggtgtttccctgtacttaggcatataaagtttgccagaccaatgg
ggctctctttccaatgtggctgactatgccatcttctgatacatatgcag
ctagagacacgagctgtggggggtactggttagttcatattgttgttcca
cctatagggttgcagaaccctttagctccttgggtactttctctagttcc
tttattggggccctctgatgcatctaatagctgactgtgagcatccactt
ctgtgtttgctagacccaggtatagcctcacaagaggcagctatatctgg
gtcctttaagcaaaatcttcctagtatgcaaagatgtcaggtttggaggc
tgattatgggacggagtcccagttatggcagtctctaaatggtccatcct
ttcatctcagctggaaacattgtctctgtgtgtctgtgatatggagtctc
accggcgaggacacacacacaggacacacactggttcttctgcaacaagc
tttaatgcatctcgagagaaagatcatcagcttctgggggaggaggctta
gaacacaggaaactcggtccttaaataggccacaagaggggttggagacg
tattttcaccctgactggctgctcactatcagcccagatgacgccacggg
gcaggcagggcacaaggaatggaaaaatactcccagcacatacgcagact
atttgtttactagttaga
gaattcagtaaataagagaaaaagatgaaaatgattttttcctatttata
gtatagatagtgaaacatataataaaataaattagatattactatttgct
attcataaaaagactcattcagataatttctggtttgctggggtacttta
aaactggaaacacggctggccaaaaaagaaggcatcatgtaatacatttg
tttcatttggaagagacaatctttagtgtctttaaattggaggcatagta
ctgataataatagtaaaatatgttctccttatatttttcaactgtgtctg
aatttgtaaccctggacacgtaatgaaacatcaaacacataatctctact
tcttgaatactcattagtctcactttgttctctgaaacctgtattaataa
actgtctgattactagtcagtcagacctgcagaaacaatctaattgctag
tcagttagagatgtgagattccctgaaatataatctactgattctctccc
ttgttttgctgactctttgtctcctctgctgaagtaaaacattggcaccc
tccacatctctctaatttggaaaagatattttattatttctcttggagca
cttgtctactctttggtattgagtggatccatggcattattttggacata
gtagtatttagtctagtactctaactttctgagaacttccgtatacatga
atcatgcccatatcctacccatttttccctacatggaacacttctctgca
tcagaacactttggaaatgactgggaatttcagaaaattccatcgagggg
agtcttcagagcactaagaatacccagtgaactgtttgtctacttttatt
caagaagaactttcagcagtgctaacaggctgcaagtactgctctgtatt
cggtacacattacctgttaagtgtgcccaacatgatgcatacataaatac
tttggtggtattttttatttaaaacaaacctctaacgtatgtttggttac
ttgatttatgcctgaacacttgccttaagaatgcaacagttaggatgtga
gactttagagcagccattcaacagaagaagacaaagctcaaaactactct
gaaaatcattggtgaaattttattttcctctgagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_150772659_150773803
seq2: B6Ng01-252G14.g_67_1204

seq1  GAATTCAGTAAATAAGAGAAAAAGATGAAAATGATTTTTTCCTATTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAATAAGAGAAAAAGATGAAAATGATTTTTTCCTATTTATA  50

seq1  GTATAGATAGTGAAACATATAATAAAATAAATTAGATATTACTATTTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGATAGTGAAACATATAATAAAATAAATTAGATATTACTATTTGCT  100

seq1  ATTCATAAAAAGACTCATTCAGATAATTTCTGGTTTGCTGGGGTACTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAAAAAGACTCATTCAGATAATTTCTGGTTTGCTGGGGTACTTTA  150

seq1  AAACTGGAAACACGGCTGGCCAAAAAAGAAGGCATCATGTAATACATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAAACACGGCTGGCCAAAAAAGAAGGCATCATGTAATACATTTG  200

seq1  TTTCATTTGGAAGAGACAATCTTTAGTGTCTTTAAATTGGAGGCATAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTGGAAGAGACAATCTTTAGTGTCTTTAAATTGGAGGCATAGTA  250

seq1  CTGATAATAATAGTAAAATATGTTCTCCTTATATTTTTCAACTGTGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAATAATAGTAAAATATGTTCTCCTTATATTTTTCAACTGTGTCTG  300

seq1  AATTTGTAACCCTGGACACGTAATGAAACATCAAACACATAATCTCTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTAACCCTGGACACGTAATGAAACATCAAACACATAATCTCTACT  350

seq1  TCTTGAATACTCATTAGTCTCACTTTGTTCTCTGAAACCTGTATTAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAATACTCATTAGTCTCACTTTGTTCTCTGAAACCTGTATTAATAA  400

seq1  ACTGTCTGATTACTAGTCAGTCAGACCTGCAGAAACAATCTAATTGCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTGATTACTAGTCAGTCAGACCTGCAGAAACAATCTAATTGCTAG  450

seq1  TCAGTTAGAGATGTGAGATTCCCTGAAATATAATCTACTGATTCTCTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAGAGATGTGAGATTCCCTGAAATATAATCTACTGATTCTCTCCC  500

seq1  TTGTTTTGCTGACTCTTTGTCTCCTCTGCTGAAGTAAAACATTGGCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGCTGACTCTTTGTCTCCTCTGCTGAAGTAAAACATTGGCACCC  550

seq1  TCCACATCTCTCTAATTTGGAAAAGATATTTTATTATTTCTCTTGGAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCTCTCTAATTTGGAAAAGATATTTTATTATTTCTCTTGGAGCA  600

seq1  CTTGTCTACTCTTTGGTATTGAGTGGATCCATGGCATTATTTTGGACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTACTCTTTGGTATTGAGTGGATCCATGGCATTATTTTGGACATA  650

seq1  GTAGTATTTAGTCTAGTACTCTAACTTTCTGAGAACTTCCGTATACATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATTTAGTCTAGTACTCTAACTTTCTGAGAACTTCCGTATACATGA  700

seq1  ATCATGCCCATATCCTACCCATTTTTCCCTACATGGAACACTTCTCTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGCCCATATCCTACCCATTTTTCCCTACATGGAACACTTCTCTGCA  750

seq1  TCAGAACACTTTGGAAATGACTGGGAATTTCAGAAAATTCCATCGAGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACACTTTGGAAATGACTGGGAATTTCAGAAAATTCCATCGAGGGG  800

seq1  AGTCTTCAGAGCACTAAGAATACCCAGTGAACTGTTTGTCTACTTTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCAGAGCACTAAGAATACCCAGTGAACTGTTTGTCTACTTTTATT  850

seq1  CAAGAAGAACTTTCAGCAGTGCTAACAGGCTGCAAGTACTGCTCTGTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGAACTTTCAGCAGTGCTAACAGGCTGCAAGTACTGCTCTGTATT  900

seq1  CGGTACACATTACCTGTTAAGTGTGCCC-ACATGATGCATACATAAATAC  949
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CGGTACACATTACCTGTTAAGTGTGCCCAACATGATGCATACATAAATAC  950

seq1  TTTGGTGGTATTTTTTATTTAAAAACAAACCTCTAACGTATGTTTGGTTA  999
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTGGTGGTATTTTTTATTT-AAAACAAACCTCTAACGTATGTTTGGTTA  999

seq1  CTTGATTTATGCCTGAACACTTTGCCTT-AGAATGC-ACAGTTTAGGATG  1047
      |||||||||||||||||||| ||||||| ||||||| |||| ||||||||
seq2  CTTGATTTATGCCTGAACAC-TTGCCTTAAGAATGCAACAG-TTAGGATG  1047

seq1  TGAAGACCTTTAAGGAAGGCAGCACATTCAACAGGAAGAAGACAAAAGCT  1097
      || ||| |||||  ||  ||||| ||||||||| ||||||||| ||||||
seq2  TG-AGA-CTTTA--GA--GCAGC-CATTCAACA-GAAGAAGAC-AAAGCT  1088

seq1  CAGACATACTCTGAAAATCATT-GTGATATTTTATTTT-CTCTGAGAAAA  1145
      || |  |||||||||||||||| |||| |||||||||| |||||||||||
seq2  CAAAACTACTCTGAAAATCATTGGTGAAATTTTATTTTCCTCTGAGAAAA  1138