BAC Information

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BAC

Clone NameB6Ng01-252I20
ChromosomeX (Build37)X (Build37)
Map Location 122,346,654 - 122,347,476120,431,994 - 120,432,766
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039828, EG434843, EG665463, EG665522, LOC100038969, LOC100038978, EG665579
Downstream geneEG665611, EG626048, LOC100040410, LOC100039903, LOC665679, 4932411N23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252I20.bB6Ng01-252I20.g
ACCGA059514GA059515
length1,0251,001
definitionB6Ng01-252I20.b B6Ng01-252I20.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(122,346,654 - 122,347,476)(120,431,994 - 120,432,766)
sequence
gaattcaaaagtacatgtcataatgtcttgtctttccttctaccatgctc
atcttgaggatcaaacacagattagctggcatagttacggttaccactta
tctgtctaaccagtaccaatactgtgttgtataaagctgacttaaaggat
tatgtaaagtcttattgaaaaatgtatatattatcattattgcccctgtt
acccacagagtggtaacagcttttaagtggttcacctcaccaagaatcca
tcaaagcccagtattttggaggtaaaatgtgcattcctgggagcccctct
gccatgcttaatattctagtaaaattaaaaataaaattaatttctcattt
aatagaccctgcttacagtcccccaaaattttactccccacggttctttt
actacctcccatcctctccagttcctccccctttctgtcatctttcatta
aatacctctctctttcaactatctcttcctgcatttccttattcaaccct
atctccctccactatgccacctgattttctctttcttgtccacctttgtc
cactaataaaatccattctatttccccataccatgggtatccatgtgtgc
acccaagtcccttcatctatacctaacttcactggatctacagattgtag
acaggccatcacttatgtaatgttgaatgtcttaatgtttctattgctgt
caccaaaaattataacccaagcacaagttggggagggtaggacttatttg
gtttacccttcctcattgctattcatcattgaagacagacagaacaggaa
ctgaaatgggccaagaacctagaggcaggagctgatacagagaccataga
tgggtgctgctgccacacacaccagtcaagtcagcttgacaggccgagag
gcctggaaagcgctcatgaggcaaagagtttcacagaagctcaccttctg
ggagttttggcgttctcattaacccatatactcataccctattccatgtt
agtctgggtgtatggatccacatgc
gaattccttgactttctgaccatagacatctatttttaaatacctgggct
ggaccacagtgtataaatccctctacaaacacacacacacacacacacac
acacacacacacacacacacacacacacacacaattatttcagttttttc
tttaaagaattttgactaccatactaccataaacctaaaacctctaaaat
taaatttatctttctatatccaattactttcatgctcctgttttgaagat
attgtaaactatgtcataatatcccttttattaattattttatttattta
tatttcaaatgttatccccttcagcataccccctccatgaggcccatacc
acacttctctcctttctctaaaaggttactctcccaccaacctctctaga
atttgccttttctggagacataaatcttccacaggacaagcacacaccct
cgtcgcactgaggtcagacaatgcaatcctctgctacatatgtatggtag
aggtcatggactagtacatgtatgctctttggttggtggcttagtacctg
agaattctgggaaatctagttttttcatgctgttgttcttcctatagggt
tgcaattcccttcatttccttcagtctttctccaaactcttccatagggg
ttcctgggtttagaacaatggttggctgtaaatatttgcatctgtctcag
tcagttgctggcatagcctcttttaggacagtcatgccatgttcctgtct
gaaagcatatcttggtcaattaacaaatgggacctcctgaaactgaaaag
gttctgtaaggcaaaggacactgtcaataggacaaaatggcaacctacta
acggagaaaagatctttactaaccctacatctgatcgaggtctaattttc
aaatatacaaagaattcaagaagatagactccaaaactcaacaccctaat
gaaaaatgggctctagagctaaacaaattctcatttagatctcaaagact
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_122346654_122347476
seq2: B6Ng01-252I20.b_46_868

seq1  GAATTCAAAAGTACATGTCATAATGTCTTGTCTTTCCTTCTACCATGCGC  50
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAATTCAAAAGTACATGTCATAATGTCTTGTCTTTCCTTCTACCATGCTC  50

seq1  ATCTTGAGGATCAAACACAGATTAGCTGGCATAGTTACGGTTACCACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAGGATCAAACACAGATTAGCTGGCATAGTTACGGTTACCACTTA  100

seq1  TCTGTCTAACCAGTACCAATACTGTGTTGTATAAAGCTGACTTAAAGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTAACCAGTACCAATACTGTGTTGTATAAAGCTGACTTAAAGGAT  150

seq1  TATGTAAAGTCTTATTGAAAAATGTATATATTATCATTATTGCCCCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAAGTCTTATTGAAAAATGTATATATTATCATTATTGCCCCTGTT  200

seq1  ACCCACAGAGTGGTAACAGCTTTTAAGTGGTTCACCTCAACAAGAATCCA  250
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACCCACAGAGTGGTAACAGCTTTTAAGTGGTTCACCTCACCAAGAATCCA  250

seq1  TCAAAGCCCAGTATTTTGGTGGTAAAATGTGCATTCCTGGGAGCCCCTCT  300
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCAAAGCCCAGTATTTTGGAGGTAAAATGTGCATTCCTGGGAGCCCCTCT  300

seq1  GCCATGCTTAATATTCTAGTAAAAGTAAAAATAAAATTAATTTCTCATTT  350
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GCCATGCTTAATATTCTAGTAAAATTAAAAATAAAATTAATTTCTCATTT  350

seq1  AATAGACCCTGCTTACAGTCCCCCAAAATTTTACTCCCCACGGTTCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACCCTGCTTACAGTCCCCCAAAATTTTACTCCCCACGGTTCTTTT  400

seq1  ACTACCTCCCATCCTCTCCAGTTCCTCCCCCTTTCTGTCATCTTTCATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCTCCCATCCTCTCCAGTTCCTCCCCCTTTCTGTCATCTTTCATTA  450

seq1  CATACCTCTCTCTTTCAACTATCTCTTCCTGCATTTCCTTATTCAACCCT  500
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTCTCTCTTTCAACTATCTCTTCCTGCATTTCCTTATTCAACCCT  500

seq1  ATCTCCCTCCACTATGCCACCTGATTTTCTCTTTCTTGTCCACCTTTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCCTCCACTATGCCACCTGATTTTCTCTTTCTTGTCCACCTTTGTC  550

seq1  CACTAATAAAATCCATTCTATTTCCCCATACCATGGGTATCCATGTGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATAAAATCCATTCTATTTCCCCATACCATGGGTATCCATGTGTGC  600

seq1  ACCCAAGTCCCTTCATCTATACCTAACTTCACTGGATCTACAGATTGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGTCCCTTCATCTATACCTAACTTCACTGGATCTACAGATTGTAG  650

seq1  ACAGGCCATCACTTATGTAATGTTGAATGTCTTAATGTTTCTATTGCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCATCACTTATGTAATGTTGAATGTCTTAATGTTTCTATTGCTGT  700

seq1  CACCAAAAACTATAACCCAAGCACAAGTTGGGGAGGGTAGGACTTATTTG  750
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAAATTATAACCCAAGCACAAGTTGGGGAGGGTAGGACTTATTTG  750

seq1  GTTTACCCTTCCTCATTGCTATTCATCATTGAAGACAGACAGAACAGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCCTTCCTCATTGCTATTCATCATTGAAGACAGACAGAACAGGAA  800

seq1  CTGAAATGGGCCAAGAACCTAGA  823
      |||||||||||||||||||||||
seq2  CTGAAATGGGCCAAGAACCTAGA  823

seq1: chrX_120431994_120432766
seq2: B6Ng01-252I20.g_69_841

seq1  GAATTCCTTGACTTTCTGACCATAGACATCTATTTTTAAATACCTGGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGACTTTCTGACCATAGACATCTATTTTTAAATACCTGGGCT  50

seq1  GGACCACAGTGTATAAATCCCTCTACAAACACACACACACACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCACAGTGTATAAATCCCTCTACAAACACACACACACACACACACAC  100

seq1  ACACACACACACACACACACACACACACACACAATTATTTCAGTTTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACAATTATTTCAGTTTTTTC  150

seq1  TTTAAAGAATTTTGACTACCATACTACCATAAACCTAAAACCTCTAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAATTTTGACTACCATACTACCATAAACCTAAAACCTCTAAAAT  200

seq1  TAAATTTATCTTTCTATATCCAATTACTTTCATGCTCCTGTTTTGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTATCTTTCTATATCCAATTACTTTCATGCTCCTGTTTTGAAGAT  250

seq1  ATTGTAAACTATGTCATAATATCCCTTTTATTAATTATTTTATTTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAACTATGTCATAATATCCCTTTTATTAATTATTTTATTTATTTA  300

seq1  TATTTCAAATGTTATCCCCTTCAGCATACCCCCTCCATGAGGCCCATACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAAATGTTATCCCCTTCAGCATACCCCCTCCATGAGGCCCATACC  350

seq1  ACACTTCTCTCCTTTCTCTAAAAGGTTACTCTCCCACCAACCTCTCTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCTCTCCTTTCTCTAAAAGGTTACTCTCCCACCAACCTCTCTAGA  400

seq1  ATTTGCCTTTTCTGGAGACATAAATCTTCCACAGGACAAGCACACACCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTTTTCTGGAGACATAAATCTTCCACAGGACAAGCACACACCCT  450

seq1  CGTCGCACTGAGGTCAGACAATGCAATCCTCTGCTACATATGTATGGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCGCACTGAGGTCAGACAATGCAATCCTCTGCTACATATGTATGGTAG  500

seq1  AGGTCATGGACTAGTACATGTATGCTCTTTGGTTGGTGGCTTAGTACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCATGGACTAGTACATGTATGCTCTTTGGTTGGTGGCTTAGTACCTG  550

seq1  AGAATTCTGGGAAATCTAGTTTTTTCATGCTGTTGTTCTTCCTATAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTGGGAAATCTAGTTTTTTCATGCTGTTGTTCTTCCTATAGGGT  600

seq1  TGCAATTCCCTTCATTTCCTTCAGTCTTTCTCCAAACTCTTCCATAGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTCCCTTCATTTCCTTCAGTCTTTCTCCAAACTCTTCCATAGGGG  650

seq1  TTCCTGGGTTTAGAACAATGGTTGGCTGTAAATATTTGCATCTGTCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGGTTTAGAACAATGGTTGGCTGTAAATATTTGCATCTGTCTCAG  700

seq1  TCAGTTGCTGGCATAGCCTCTTTTAGGACAGTCATGCCATGTTCCTGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGCTGGCATAGCCTCTTTTAGGACAGTCATGCCATGTTCCTGTCT  750

seq1  GAAAGCATATCTTGGTCAATTAA  773
      |||||||||||||||||||||||
seq2  GAAAGCATATCTTGGTCAATTAA  773