BAC Information

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BAC

Clone NameB6Ng01-253K22
ChromosomeX (Build37)
Map Location 85,831,761 - 85,976,833
singlet/doubletdoublet
Overlap geneEG245506
Upstream geneLOC667876, EG667883, LOC667891
Downstream geneLOC667911, LOC100041707, EG436213, LOC667919, LOC100041727, LOC667934, Pet2, EG629419
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253K22.bB6Ng01-253K22.g
ACCGA060350GA060351
length1,142203
definitionB6Ng01-253K22.b B6Ng01-253K22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,975,695 - 85,976,833)(85,831,761 - 85,831,963)
sequence
gaattcatcagaactaggattctgctgagcaagttgttgctcaaaatata
ttttttaatgtacattgaatggcattgtacacaaaacgtgagtatttcta
aaattacttcaagcaattgtgcattttgataatcatcagggcagatgtta
gccctattatgatcgatgtcattttctaccgtggtggacaaaattggtgc
tgtaaggttactaatgcagtgtgtatagaagaaattcagaaatccttttc
tttcatatccattacttgtgacaggcatattttctggatcaagaagagca
tgaagaactactggtaaaatgatgccttgtgaaaattcaggatcagaatc
acagatcatttttttgatcattatattaatgagaaggtcatcattatctt
cactgtcctgagcttcctccattgaatatgcttgaactacttgaggatta
tattctgctagataagcaaatatatctagagcagctatttgtatttggtt
atcatgcatgtgtactatgactttcagagcattcatgattcctagcttta
tcagtgtttttattaatgcatttttttcttgagactctaatatctcagca
aatgcacagaattccttaaagaataataacaattcatgccttctctcatc
acatacagtgttatcttttaactgagcaaaaatttcaagcaaaaaatttt
catcttcctgtagcatggtaattatctcaattttattgaaaaaaatcata
gtggtaagatcagaaagaagatttgcttcaactatggatggggtaggcaa
cacaatatcataaacatattgcattctgtaggtctgttgtattttttgcc
taagttgggattgtgttattgggataatgtccttgaatttcacattttga
gtcaagaattctctatgcctctttggttgatccgaatcaggtcatattca
aagcatcctaccacgtccatgaaaaattcatcagaacacatgatcttaaa
cagcgtgtatcatttagaaacaggattcctttaatgatgctattcaaata
tgtaagcccttcaatgttcagctttttttccacaggtgtcgaaatagttg
cagcagttttttaaatataaccgtcaattctagacagaccag

ttaagaacaagcctatagaatagtttacttagggcatagaaaggggagtt
gagaagagagtagagatagaggaagagagaagggagagagacagagaaag
agagagagagagagagagagagagagagagagagaggaggggaggataga
agtctagccaggaacacttggaaagagagggaggagggggatagggagag
aga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_85975695_85976833
seq2: B6Ng01-253K22.b_48_1189 (reverse)

seq1  CTGGTCT---TAGAAAATGACGGTTATA-TTAAAAAATTGCTGCAACTA-  45
      |||||||   ||| || ||||||||||| |||||||| ||||||||||| 
seq2  CTGGTCTGTCTAG-AATTGACGGTTATATTTAAAAAACTGCTGCAACTAT  49

seq1  TTCGACACTTGT-GAAAAAAAGCTGAACATTGAA-GGCTTACAATATTTG  93
      |||||||| ||| ||||||||||||||||||||| ||||||| |||||||
seq2  TTCGACACCTGTGGAAAAAAAGCTGAACATTGAAGGGCTTAC-ATATTTG  98

seq1  AATAGCATCATTAAAGGAATCCTGTTTCTAAATGATACACGCTTGTTTAA  143
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATAGCATCATTAAAGGAATCCTGTTTCTAAATGATACACGC-TGTTTAA  147

seq1  GATCATGTGTTCTGATGAATTTTTCATGGACGTGGTAGGATGCCTTGAAT  193
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GATCATGTGTTCTGATGAATTTTTCATGGACGTGGTAGGATGCTTTGAAT  197

seq1  ATGACCCTGATTCGGATCAACCAAAGAGGCATAGAGAATTCTTGACTCAA  243
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGA-CCTGATTCGGATCAACCAAAGAGGCATAGAGAATTCTTGACTCAA  246

seq1  AATGTGAAATTCAAGGACATTATCCCAATAACACAATCCCAACTTAGGCA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAAATTCAAGGACATTATCCCAATAACACAATCCCAACTTAGGCA  296

seq1  AAAAATACAACAGACCTACAGAATGCAATATGTTTATGATATTGTGTTGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACAACAGACCTACAGAATGCAATATGTTTATGATATTGTGTTGC  346

seq1  CTACCCCATCCATAGTTGAAGCAAATCTTCTTTCTGATCTTACCACTATG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCCATCCATAGTTGAAGCAAATCTTCTTTCTGATCTTACCACTATG  396

seq1  ATTTTTTTCAATAAAATTGAGATAATTACCATGCTACAGGAAGATGAAAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCAATAAAATTGAGATAATTACCATGCTACAGGAAGATGAAAA  446

seq1  TTTTTTGCTTGAAATTTTTGCTCAGTTAAAAGATAACACTGTATGTGATG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGCTTGAAATTTTTGCTCAGTTAAAAGATAACACTGTATGTGATG  496

seq1  AGAGAAGGCATGAATTGTTATTATTCTTTAAGGAATTCTGTGCATTTGCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGGCATGAATTGTTATTATTCTTTAAGGAATTCTGTGCATTTGCT  546

seq1  GAGATATTAGAGTCTCAAGAAAAAAATGCATTAATAAAAACACTGATAAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATTAGAGTCTCAAGAAAAAAATGCATTAATAAAAACACTGATAAA  596

seq1  GCTAGGAATCATGAATGCTCTGAAAGTCATAGTACACATGCATGATAACC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGAATCATGAATGCTCTGAAAGTCATAGTACACATGCATGATAACC  646

seq1  AAATACAAATAGCTGCTCTAGATATATTTGCTTATCTAGCAGAATATAAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAATAGCTGCTCTAGATATATTTGCTTATCTAGCAGAATATAAT  696

seq1  CCTCAAGTAGTTCAAGCATATTCAATGGAGGAAGCTCAGGACAGTGAAGA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGTAGTTCAAGCATATTCAATGGAGGAAGCTCAGGACAGTGAAGA  746

seq1  TAATGATGACCTTCTCATTAATATAATGATCAAAAAAATGATCTGTGATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGACCTTCTCATTAATATAATGATCAAAAAAATGATCTGTGATT  796

seq1  CTGATCCTGAATTTTCACAAGGCATCATTTTACCAGTAGTTCTTCATGCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCTGAATTTTCACAAGGCATCATTTTACCAGTAGTTCTTCATGCT  846

seq1  CTTCTTGATCCAGAAAATATGCCTGTCACAAGTAATGGATATGAAAGAAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGATCCAGAAAATATGCCTGTCACAAGTAATGGATATGAAAGAAA  896

seq1  AGGATTTCTGAATTTCTTCTATACACACTGCATTAGTAACCTTACAGCAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTCTGAATTTCTTCTATACACACTGCATTAGTAACCTTACAGCAC  946

seq1  CAATTTTGTCCACCACGGTAGAAAATGACATCGATCATAATAGGGCTAAC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTGTCCACCACGGTAGAAAATGACATCGATCATAATAGGGCTAAC  996

seq1  ATCTGCCCTGATGATTATCAAAATGCACAATTGCTTGAAGTAATTTTAGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCCTGATGATTATCAAAATGCACAATTGCTTGAAGTAATTTTAGA  1046

seq1  AATACTCACGTTTTGTGTACAATGCCATTCAATGTACATTAAAAAATATA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCACGTTTTGTGTACAATGCCATTCAATGTACATTAAAAAATATA  1096

seq1  TTTTGAGCAACAACTTGCTCAGCAGAATCCTAGTTCTGATGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGCAACAACTTGCTCAGCAGAATCCTAGTTCTGATGAATTC  1142


seq1: chrX_85831761_85831963
seq2: B6Ng01-253K22.g_69_271

seq1  TTAAGAACAAGCCTATAGAATAGTTTACTTAGGGCATAGAAAGGGGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAACAAGCCTATAGAATAGTTTACTTAGGGCATAGAAAGGGGAGTT  50

seq1  GAGAAGAGAGTAGAGATAGAGGAAGAGAGAAGGGAGAGAGACAGAGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGAGTAGAGATAGAGGAAGAGAGAAGGGAGAGAGACAGAGAAAG  100

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGGGAGGATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGGGAGGATAGA  150

seq1  AGTCTAGCCAGGAACACTTGGAAAGAGAGGGAGGAGGGGGATAGGGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGCCAGGAACACTTGGAAAGAGAGGGAGGAGGGGGATAGGGAGAG  200

seq1  AGA  203
      |||
seq2  AGA  203


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