BAC Information

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BAC

Clone NameB6Ng01-254C11
Chromosome4 (Build37)X (Build37)
Map Location 69,697,456 - 69,698,63449,449,729 - 49,449,769
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC622491, LOC433716, LOC100039888, LOC242497
Downstream geneLOC671064, Cdk5rap2, Megf9
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254C11.bB6Ng01-254C11.g
ACCGA060697GA060698
length1,179326
definitionB6Ng01-254C11.b B6Ng01-254C11.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(69,697,456 - 69,698,634)(49,449,729 - 49,449,769)
sequence
gaattcaatgttctgaattttgggttttgttggaagtcataattttaaga
cagtatcactgtatagccccttagtaactcaaaatttattgtgtagtact
gactagccttgaacttacaccaagcctcatgctttttgcttcttatgcct
gcttatagtatttagaatccacacaaataaaatccaaagcaaccacaaac
ccttttaggtcctttaaaggacagggagctgttggtactgcactactctg
taatactcaagacagataatattgaaacattgataagaaattggaagccc
tgtgcagtgttactgggagtgctagtgggtatgggaacaggatacaggac
cctcctaacacctgctaagtaattacccaaaagaatgaaaacaggatcaa
gactgatggtgtgtatgcagttaatcctagtgctcaggaggcagaagcag
gcagatctctgatctgaggttgaggttagcttggtctagagagagttcca
ggacagctgaggatgttcagagaaggcctatctcaaagatcaaaaatata
ataataataataataataataataataataataataataataatagaaag
caggacccagactcttgttagctatgtttactgctgtactacttccaact
gtcatgatatgaaaacagcctaaaatgtctgtcattcagatggatggaca
ccaaatggaaacgtgtacacacacacacacacacacacacacacacacgg
tagagagagacctcgcactcctgagggaagtctggggacactgcccacag
ggaacaaactgatcccagaagaacagagattgcaagagtccatgtcaatg
atgttccccatacagtagaactcacagaagcagagagtagcatggccggt
gccagggctggggtaggggacagcaagagttgtcaatgtttaggccaaaa
gtttcagaatgtgagtacactgaatacatcttagtgatttgcttttatgc
tatgccatgactaacaatgctccccatgaaagatggatgtatcttcacag
aagaatgttctttaccattattaaaatacaatcaaaaataaatgtatgag
gtgggaaaaaacaatgaaaaccaattctttttaagttgggggtgattaac
cttaaacccacgagtcccataagacttta

aaatgtcatcttggagaattatggtggagtttttctttccttccccatat
cttttgattggtttggtttgaagtctattttgttagctattaaaatggct
acaataacttgcttcttgggtccattgtttagaatatctgtttccaacct
tttaccttgaggtaatatctatccctgatggtgaggtgtgtgtcttggat
acatcagaaggatggatcctgttttcacaggctttatattggggccttga
gaacactgatattgaaaattattgattcgtgatattttgttgttgttgtt
tttttcgttgtggtggtggtggtgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_69697456_69698634
seq2: B6Ng01-254C11.b_46_1224

seq1  GAATTCAATGTTCTGAATTTTGGGTTTTGTTGGAAGTCATAATTTTAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTTCTGAATTTTGGGTTTTGTTGGAAGTCATAATTTTAAGA  50

seq1  CAGTATCACTGTATAGCCCCTTAGTAACTCAAAATTTATTGTGTAGTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCACTGTATAGCCCCTTAGTAACTCAAAATTTATTGTGTAGTACT  100

seq1  GACTAGCCTTGAACTTACACCAAGCCTCATGCTTTTTGCTTCTTATGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGCCTTGAACTTACACCAAGCCTCATGCTTTTTGCTTCTTATGCCT  150

seq1  GCTTATAGTATTTAGAATCCACACAAATAAAATCCAAAGCAACCACAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAGTATTTAGAATCCACACAAATAAAATCCAAAGCAACCACAAAC  200

seq1  CCTTTTAGGTCCTTTAAAGGACAGGGAGCTGTTGGTACTGCACTACTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAGGTCCTTTAAAGGACAGGGAGCTGTTGGTACTGCACTACTCTG  250

seq1  TAATACTCAAGACAGATAATATTGAAACATTGATAAGAAATTGGAAGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTCAAGACAGATAATATTGAAACATTGATAAGAAATTGGAAGCCC  300

seq1  TGTGCAGTGTTACTGGGAGTGCTAGTGGGTATGGGAACAGGATACAGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGTGTTACTGGGAGTGCTAGTGGGTATGGGAACAGGATACAGGAC  350

seq1  CCTCCTAACACCTGCTAAGTAATTACCCAAAAGAATGAAAACAGGATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTAACACCTGCTAAGTAATTACCCAAAAGAATGAAAACAGGATCAA  400

seq1  GACTGATGGTGTGTATGCAGTTAATCCTAGTGCTCAGGAGGCAGAAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGATGGTGTGTATGCAGTTAATCCTAGTGCTCAGGAGGCAGAAGCAG  450

seq1  GCAGATCTCTGATCTGAGGTTGAGGTTAGCTTGGTCTAGAGAGAGTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATCTCTGATCTGAGGTTGAGGTTAGCTTGGTCTAGAGAGAGTTCCA  500

seq1  GGACAGCTGAGGATGTTCAGAGAAGGCCTATCTCAAAGATCAAAAATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCTGAGGATGTTCAGAGAAGGCCTATCTCAAAGATCAAAAATATA  550

seq1  ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGAAAG  600

seq1  CAGGACCCAGACTCTTGTTAGCTATGTTTACTGCTGTACTACTTCCAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCCAGACTCTTGTTAGCTATGTTTACTGCTGTACTACTTCCAACT  650

seq1  GTCATGATATGAAAACAGCCTAAAATGTCTGTCATTCAGATGGATGGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGATATGAAAACAGCCTAAAATGTCTGTCATTCAGATGGATGGACA  700

seq1  CCAAATGGAAACGTGTACACACACACACACACACACACACACACACACGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGGAAACGTGTACACACACACACACACACACACACACACACACGG  750

seq1  TAGAGAGAGACCTCGCACTCCTGAGGGAAGTCTGGGGACACTGCCCACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGAGACCTCGCACTCCTGAGGGAAGTCTGGGGACACTGCCCACAG  800

seq1  GGAACAAACTGATCCCAGAAGAACAGAGATTGCAAGAGTCCATGTCAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAACTGATCCCAGAAGAACAGAGATTGCAAGAGTCCATGTCAATG  850

seq1  ATGTTCCCCATACAGTAGAACTCACAGAAGCAGAGAGTAGCATGGCCGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCCCATACAGTAGAACTCACAGAAGCAGAGAGTAGCATGGCCGGT  900

seq1  GCCAGGGCTGGGGTAGGGGACAGCAAGAGTTGTCAATGTTTAGGCCAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCTGGGGTAGGGGACAGCAAGAGTTGTCAATGTTTAGGCCAAAA  950

seq1  GTTTCAGAATGTGAGTACACTGAATACATCTTAGTGATTTGC-TTTATGC  999
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTTTCAGAATGTGAGTACACTGAATACATCTTAGTGATTTGCTTTTATGC  1000

seq1  TATGCCCATGACTAACAATGCTCCCCATGAAAGATGGATGTAATCTCACA  1049
      |||| |||||||||||||||||||||||||||||||||||||   |||||
seq2  TATG-CCATGACTAACAATGCTCCCCATGAAAGATGGATGTATCTTCACA  1049

seq1  GAAG-ATGTTC-TTACCATTA-TAAAATACAATCAAAAATAAATGTATGA  1096
      |||| |||||| ||||||||| ||||||||||||||||||||||||||||
seq2  GAAGAATGTTCTTTACCATTATTAAAATACAATCAAAAATAAATGTATGA  1099

seq1  GGTGGGAAAAAACAATGAAAACAAATTTTCTTTTTACAGT--GGGGTGAT  1144
      |||||||||||||||||||||| ||  ||||||||| |||  ||||||||
seq2  GGTGGGAAAAAACAATGAAAACCAA--TTCTTTTTA-AGTTGGGGGTGAT  1146

seq1  AAAACCTAACACCACGAGTTCCAATTAAGACTTTA  1179
       || | |||  |||||||| |||  ||||||||||
seq2  TAACCTTAAACCCACGAGTCCCA--TAAGACTTTA  1179


seq1: chrX_49449729_49449769
seq2: B6Ng01-254C11.g_357_398 (reverse)

seq1  ATCACCACCACCACCAAAAC-CAAAAAACAACAACAACAAAA  41
      |||||||||||||||| |||  ||||||||||||||||||||
seq2  ATCACCACCACCACCACAACGAAAAAAACAACAACAACAAAA  42


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