BAC Information

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BAC

Clone NameB6Ng01-255P15
ChromosomeX (Build37)
Map Location 151,230,700 - 151,231,281
singlet/doubletsinglet
Overlap genenone
Upstream geneSpin2, 4921511M17Rik, OTTMUSG00000019268, LOC625650, LOC100040020, EG546397, OTTMUSG00000019256, EG434874, LOC635580, EG625767, LOC270665, LOC100040076, 4930524N10Rik, EG434879, LOC667313, 4930542N07Rik, EG434881, LOC100040899, LOC667331
Downstream geneLOC100040925, LOC100040937, Magea6, Magea3, LOC626034, Magea8, Magea2, Magea5, Magea1, 1700042B14Rik, LOC245676, Amd-ps1, LOC667369, Sat1, Acot9, LOC667383, Prdx4, LOC667394, Ptchd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255P15.bB6Ng01-255P15.g
ACCGA062054GA062055
length9701,129
definitionB6Ng01-255P15.b B6Ng01-255P15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgaaactagatattcttcgatgtaatgattcttaaactttaa
aaaatttaggcatggggcacagcacagtacatttcttttttttccatttt
ttattagttattgagctcaattacatttccaatgctataccaaaagtccc
ccatacccacccatccccactcccctacccacccactccccctttttggc
cctggcgttcccctgtactggggcatataaagtttgcgtgtccaatgggc
ctctctttccagtgatggccgactaggccatcttttgatacatatgcagc
tagagtcaagagctccggggtactggttagttcataatgttgttccacct
atagggttgcagatccctttagctccttggctactttctctagctcctcc
attgggagccctatgatccatccattagctgactgtgagcatccacttct
gtgtttgctaggccccggcatagtctcacaagagacagctacatctgggt
cctttcaataaaatcttgctagtgtatgcaatggtgtcagcgtttggatg
ctgattatggggtggatccctggatatggcagtctctacatggtccatcc
tttcatctcagctccaaactttgtctctgtaactccttccatgggtattt
tgttcccaattctaaggaggggcatagtgtccatacttcagtcttcattc
ttcttgagtttcatgtgtttagcgaattgtatcttatatcttgggtatcc
taggtttggggctaatatctacttatcagttagtacatattgtgtgagtt
cctttgtgaatgtgttacctcactcagatgatgccctccaggtccatcca
tttggctaggatcgagaattgacaatgggacctaaaggaaactccaaagt
ttctgcaaggcaaaagacaccgtcataagacaaagaccaccaacagattg
gaaaggatctttactatcct
gaattctggtggttatctggagacagaggaggagctgagccatgcatgat
gccaaggtgacagctatggtttgacttctgaagacctgttccagatttag
tcaccccaaattgaaccagttctacctatttagccccaagttcattaaac
aagaacaattaagagtactgggctccaagttagacaacatcctcagcata
aagtggggtatgtaagtcccaaccctagctcaggagctctatataattta
tagcccccataggagagagcttgctttccttacatgggcagtgtctggcc
cgtttatcatgcttcactgaatggccatatgcccaagtgtattcaggcat
tatcaatttgattccgttggttaaaatacatgagagtgcaagtattagta
agaattgtagtgggtgggacttggaggatttgggagagtctgggatataa
aaccatgccaggaagtttgctaaggtagagcatttcaggacctagagact
cagtgggcacacctgacacttaggtgactactagctccctgccttactcc
tgaaataaaaattgtgtcctgcttctcacatcaaagagacatgacctgtg
gtcacaggcttaaaacagagttctccatgctaattaggtacttagagtcc
tggaagactcagacaatagcctcccatcacggatattccaccctgaaaag
atttaatttcaggcacaccctgaaatgtagggtatggttttgagcatcca
ttttccaccatgacaataaccagtttggaaccacagactctttcttttca
ccatgatatgctgtggggagccattgaggcctttgcctacagagtcacat
tgttgggaacaaaataaaaatggggaggggtcccaggggcctggagaaga
atggaaggaaaaataagcctacacccccacacagtttcctatttctctgt
cagtcaggcgcggagggctgctatttaccctatccatgcattgcttgtga
gtattcctctatccattctcaaggggaagtcagggacagcatgctggtga
ccaacctcccgagacactttgctaggcatcagctgtggaggatgcagagc
agagtcaacctgaacgagtggcgcattgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_151230700_151231281
seq2: B6Ng01-255P15.b_48_629

seq1  GAATTCTGTGAAACTAGATATTCTTCGATGTAATGATTCTTAAACTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGAAACTAGATATTCTTCGATGTAATGATTCTTAAACTTTAA  50

seq1  AAAATTTAGGCATGGGGCACAGCACAGTACATTTCTTTTTTTTCCATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAGGCATGGGGCACAGCACAGTACATTTCTTTTTTTTCCATTTT  100

seq1  TTATTAGTTATTGAGCTCAATTACATTTCCAATGCTATACCAAAAGTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTTATTGAGCTCAATTACATTTCCAATGCTATACCAAAAGTCCC  150

seq1  CCATACCCACCCATCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACCCACCCATCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGGC  200

seq1  CCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTCCAATGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTCCAATGGGC  250

seq1  CTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGC  300

seq1  TAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCT  350

seq1  ATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCC  400

seq1  ATTGGGAGCCCTATGATCCATCCATTAGCTGACTGTGAGCATCCACTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGAGCCCTATGATCCATCCATTAGCTGACTGTGAGCATCCACTTCT  450

seq1  GTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGT  500

seq1  CCTTTCAATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATG  550

seq1  CTGATTATGGGGTGGATCCCTGGATATGGCAG  582
      ||||||||||||||||||||||||||||||||
seq2  CTGATTATGGGGTGGATCCCTGGATATGGCAG  582