BAC Information

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BAC

Clone NameB6Ng01-256E09
ChromosomeX (Build37)
Map Location 89,090,107 - 89,091,151
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041815, Gm44, LOC670074, LOC667972, LOC667976, Mageb2, EG278167, EG667988, EG667993, EG385489, 1700084M14Rik, EG236891, LOC629542, Mageb5, LOC673766
Downstream geneLOC633484, LOC674396, EG278087, Mageb1, EG236892, EG236893, Mageb18, EG436259, EG668061, EG546347, LOC629568
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256E09.bB6Ng01-256E09.g
ACCGA062274GA062275
length1,1901,061
definitionB6Ng01-256E09.b B6Ng01-256E09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatataaaaccagagacacagaaacttactgaggataaagtggg
gaaaagccttgagatatgggcacaggggaaaaattcttgaacagaacagc
aataccttgtgttgtgagattgagaatcaacaaatgacacctcataaaat
tgcaaagcttctgtaaggcaaaagacaatgtcaagatcttgtctcccggg
accctctgagaccagcctgaacagattagctcattgattgtagagggtga
gtgagcagactgcagaagcaacacagcttctgagacaagtagaagagaca
ttgcttctgggacagacccctgttttaagctccagacatacgggcacctt
ccctaccagaggtgaccaccacggagggctctgaaatccagagcaggtaa
gggagccatcttgtgtcttgtgtccctcagagaccagattgtgcaggtaa
gcacagactgcagaggcaacacatctgggacaggccctgtttcgggcctc
aatcttcagccaggaggcaggtctgaaaaccagacctctgtgcacctccc
ctgcaagaaaagagcttgcctgaagaaagcattctgaccactgagactca
gaagagaactagactcccaggacagctgagagaggctaacagaatcacag
gaggaacaggctccagtcaaagacaactataacaactaacaccagagatt
accagatggcgaaaggcaaactcttaccaacagaaatcaatactgctcac
cataatcagaaaccagcacacccacctcaaccagtctgggacatcccaac
agacccaaaaaacaagattaggattcaaaatcatgtctcatgatgctggt
agaggacattaagaaaggcattgatgactcactaagaaatacaggagaac
actgctaaacaggtaaaagtccttaaagaagcacaggaaaacactgctag
acaggtaaaagtccttaagaggaaacaacaaaaaatcctttaaggattac
agaaacacaccaaacaggtaatgattggacaaactatccagacctaaaag
gaggtagaaacaataagaaaaccccaactggaaacaactctaaatataga
acctaacaagaatcaggatcatagaattgtgaacatcagcaacgatacac
agaatgatgaagagacttctcagttacaggaaagaatcta
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccggaattcggcaccaattgttattaga
cgcgttctcacgaccggccaggaagaacaccacagaccagaatcttctgc
ggcaaagctttatttcttacatcttcaggagcaagcgtgcaggaagcaag
agagcaagaagcaagagagcaagaagcaagagcgagagaaaacgaaaccc
cgtccctcttaaggagcattctccttcgcctcggacgtgtcactccctga
ttggctgcagcccatcggccgagttgacgtcacggggaaggcagagcaca
agtagtcataagatacccttggcacatgcgcagattatttgtttaccact
tagaacacagctgtcagcgccatcttgtaacggcgaatgtgggcgcggct
cccaacaataatctataaatataacaaaaacaaaaagaagtcataagtat
gagtattaaaagtatgctggacttttatgctgtttctggggtttgaactc
agtcccttatgcttctaacataagcactttaccaactgagctatttcctc
agtcctatgagtcttatggaagcaggaaaataaaaggagaccattgtagg
taggcactgggaaaacaataacaagctacagtgatctaaagggagaaatg
gtagaagctgagggtctaagtggagggagccgaaaggagttaagtagagg
gaggagggaggagaaagaagaaaagtaagaatttgtgaaaaaggtttttg
ggatccttcttagttggagcttctattgccatgatagagcatcatgacaa
aaaaaaaaaaaaatgacttagggagaagagtttatgtcatttttatagtt
tgatgtcacagatcaacaactgagcctcactgagcaaagtcatggccggg
acttcagaatttggaaggcaaagaactgatgcacatgtcatggagaatct
gattagactgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_89090107_89091151
seq2: B6Ng01-256E09.g_72_1122 (reverse)

seq1  CAAGTCTACATCAGAATTCCTCCATGACATGTGCATCAGTTC-TTGCC-T  48
      | |||||| ||||||  | ||||||||||||||||||||||| ||||| |
seq2  CCAGTCTA-ATCAGA--TTCTCCATGACATGTGCATCAGTTCTTTGCCTT  47

seq1  CCACATTCTG-AGTCCCGGCCCTGACTTTGCTCAGTGA-GCTCAG-TGTT  95
      ||| |||||| |||||||||| |||||||||||||||| |||||| ||||
seq2  CCAAATTCTGAAGTCCCGGCCATGACTTTGCTCAGTGAGGCTCAGTTGTT  97

seq1  GATCTGTGACATCAAACTAT-AAAATGACATAAACTCTTTCTCCTAAAGT  144
      |||||||||||||||||||| |||||||||||||||| ||||||  ||||
seq2  GATCTGTGACATCAAACTATAAAAATGACATAAACTC-TTCTCCCTAAGT  146

seq1  CA--TTTTTTTTTTTTTGTCATGATGCTCTATCATGGCAATAGAAGCTCC  192
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTTTTTTTTTGTCATGATGCTCTATCATGGCAATAGAAGCTCC  196

seq1  AACTAAGAAGGATCCCAAAAACCTTTTTCAC-AATTCTTACTTTTCTTCT  241
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AACTAAGAAGGATCCCAAAAACCTTTTTCACAAATTCTTACTTTTCTTCT  246

seq1  TTCTCCTCCCTCCTCCCTCTACTTAACTCC-TTCGGCTCCCTCCACTTAG  290
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTCTCCTCCCTCCTCCCTCTACTTAACTCCTTTCGGCTCCCTCCACTTAG  296

seq1  ACCCTCAGCTTCTACCATTTCTCCCTTTAGATCACTGTAGCTTGTTATTG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAGCTTCTACCATTTCTCCCTTTAGATCACTGTAGCTTGTTATTG  346

seq1  TTTTCCCAGTGCCTACCTACAATGGTCTCCTTTTATTTTCCTGCTTCCAT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCAGTGCCTACCTACAATGGTCTCCTTTTATTTTCCTGCTTCCAT  396

seq1  AAGACTCATAGGACTGAGGAAATAGCTCAGTTGGTAAAGTGCTTATGTTA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCATAGGACTGAGGAAATAGCTCAGTTGGTAAAGTGCTTATGTTA  446

seq1  GAAGCATAAGGGACTGAGTTCAAACCCCAGAAACAGCATAAAAGTCCAGC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATAAGGGACTGAGTTCAAACCCCAGAAACAGCATAAAAGTCCAGC  496

seq1  ATACTTTTAATACTCATACTTATGACTTCTTTTTGTTTTTGTTATATTTA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTTAATACTCATACTTATGACTTCTTTTTGTTTTTGTTATATTTA  546

seq1  TAGATTATTGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTATTGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCT  596

seq1  GACAGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGGG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGGG  646

seq1  TATCTTATGACTACTTGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTATGACTACTTGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCG  696

seq1  ATGGGCTGCAGCCAATCAGGGAGTGACACGTCCGAGGCGAAGGAGAATGC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTGCAGCCAATCAGGGAGTGACACGTCCGAGGCGAAGGAGAATGC  746

seq1  TCCTTAAGAGGGACGGGGTTTCGTTTTCTCTCGCTCTTGCTTCTTGCTCT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAAGAGGGACGGGGTTTCGTTTTCTCTCGCTCTTGCTTCTTGCTCT  796

seq1  CTTGCTTCTTGCTCTCTTGCTTCCTGCACGCTTGCTCCTGAAGATGTAAG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTCTTGCTCTCTTGCTTCCTGCACGCTTGCTCCTGAAGATGTAAG  846

seq1  AAATAAAGCTTTGCCGCAGAAGATTCTGGTCTGTGGTGTTCTTCCTGGCC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGCTTTGCCGCAGAAGATTCTGGTCTGTGGTGTTCTTCCTGGCC  896

seq1  GGTCGTGAGAACGCGTCTAATAACAATTGGTGCCGAATTCCGGGACGAGA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGTGAGAACGCGTCTAATAACAATTGGTGCCGAATTCCGGGACGAGA  946

seq1  AAAAACTCGGGACTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCGGGACTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACT  996

seq1  GCGGGTCGCGGTAATAAAGGTTCCCGTAAAGCAGACTGTTAAGAAGGATT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGTCGCGGTAATAAAGGTTCCCGTAAAGCAGACTGTTAAGAAGGATT  1046

seq1  CAACT  1045
      |||||
seq2  CAACT  1051