BAC Information

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BAC

Clone NameB6Ng01-256E18
ChromosomeX (Build37)
Map Location 153,975,599 - 153,976,781
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640803, LOC434885, Phex, Gm1947, Sms, LOC100041181
Downstream geneEG625253, Mbtps2, LOC100040239, LOC667460, LOC667465, Smpx, Klhl34, Cnksr2, EG667483, LOC671033, LOC667487
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256E18.bB6Ng01-256E18.g
ACCGA062292GA062293
length1,141461
definitionB6Ng01-256E18.b B6Ng01-256E18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgagtaaatgtgtgtgttgacaggaactggccatgtcagagcc
cccagagcttcagatctatgaaggaatgatagttttcctctggtctaagt
aggaatgttgatagtgtgaaccaaaaatgtatatcatagctttctctcca
tgaatatttacaacctgaatactgctcccttacagagactgctcctgcct
agattaccttgtttatctgtatgtaataactcaggcctccttgtccaagt
gtatataataaccctcctttctgtcgagctgtatatactgaatatgctga
agttctggggtgcttcagttccttaaggcaagagctcagactacctgatc
ttacttttatgactgtatgtctgtgtagctctcccattttcttaagtccc
tggctcccatcctagtcagttccaagtccctgaacataacagtgtacaaa
ctctaggacctgagtttggatcctcaccacccccacaaaaacaaggcatg
atggtagcaagtgtctgtaaccctagaactgcagttgtagaagagataga
gacaagcagatccccagagttcactggccagccagatcaggatgctccaa
gctcagtgagagaccctgtcttgaaaaataaggtggtgagccaccaaaca
cctgatgtcaatgtttggccactccacctaagtacatggacccacatgta
cacacacgcatacatacactacacatacacacaacttatacctcagtgtt
ttcctattcatagagtagacatatcacttatttgtaaaaataatatgaaa
gcacttcatggaaagaaataaagtcaccaacgagacataagaatgttggt
aaagaacaccaagatagcccagagtggtggcacacaccttcagtcccaga
gctcaggaggcaaagtcaggtgaatctcttgagttcaaggccagcctgat
ctacagagtagttctaggatgcccagggctacacagagaaacccatctcg
aagaagagaagaagaagacgaagagagaagaagaggaagaaggaggaaga
ggacagagagagtgagagagaaagacagaagaaagtaaggaagaagaaaa
gaaaaatgcagcaacaaaaaactcaggtcatgttaccctgt

ctcctatcaaaaggaagtgcagagacaaagagtggagcagagacagtagg
aaaggccacccagagactgtcccaactaagaatccattccatctgcagac
accaaacccagacactattgtggatgccaagaagagcttgcttacaggtg
tctgatatagctgtctcctgagagggtgtgccagagcttgaccaatacag
acttggatgcacccagctgaacatcggactgaggggtgggggaacccaat
ggaggagttagggcaaagactgaaggagctgaaggggtttgcaaccccat
aggaagaataacaatatcaaccaaccagaccccccccaaagatcctaggg
actgaaaccaccaaccaaagagtacacatgtggggagcccatggcttcag
ctgcttatggagcaggtgagggagcaccttcgcagaggcaggggagggaa
tggggggggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_153975599_153976781
seq2: B6Ng01-256E18.b_45_1185 (reverse)

seq1  ACAGGGTAACATGAACTTGATGTTTTTTTGTTTGCTTGCTTTTTTTTTCT  50
      ||||||||||||| || ||| |||||||   |||| ||| |         
seq2  ACAGGGTAACATG-ACCTGA-GTTTTTT--GTTGC-TGCAT---------  36

seq1  TTTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTCTCTCT  100
              |||||||||||    | ||| || |||   | |||| ||| |
seq2  --------TTTTCTTTTCT----TCTTCCTTACTT---TCTTCTGTCTTT  71

seq1  CTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  150
      ||||||| |||| ||| ||          |||| |  || ||||| || |
seq2  CTCTCTCACTCTCTCTGTC---------CTCTTCC--TCCTTCTTCCTCT  110

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTGAGATGGGTTTCTCTG  200
        |||| ||||  | |  |||||   |||||   ||||||||||||||||
seq2  TCTTCTCTCTTCGTCTTCTTCTTCTCTTCTT--CGAGATGGGTTTCTCTG  158

seq1  TGTAGCCCTGGGCATCCTAGAACTACTCTGTAGATCAGGCTGGCCTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCCTGGGCATCCTAGAACTACTCTGTAGATCAGGCTGGCCTTGAA  208

seq1  CTCAAGAGATTCACCTGACTTTGCCTCCTGAGCTCTGGGACTGAAGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAGATTCACCTGACTTTGCCTCCTGAGCTCTGGGACTGAAGGTGT  258

seq1  GTGCCACCACTCTGGGCTATCTTGGTGTTCTTTACCAACATTCTTATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACCACTCTGGGCTATCTTGGTGTTCTTTACCAACATTCTTATGTC  308

seq1  TCGTTGGTGACTTTATTTCTTTCCATGAAGTGCTTTCATATTATTTTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTGGTGACTTTATTTCTTTCCATGAAGTGCTTTCATATTATTTTTAC  358

seq1  AAATAAGTGATATGTCTACTCTATGAATAGGAAAACACTGAGGTATAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTGATATGTCTACTCTATGAATAGGAAAACACTGAGGTATAAGT  408

seq1  TGTGTGTATGTGTAGTGTATGTATGCGTGTGTGTACATGTGGGTCCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTATGTGTAGTGTATGTATGCGTGTGTGTACATGTGGGTCCATGT  458

seq1  ACTTAGGTGGAGTGGCCAAACATTGACATCAGGTGTTTGGTGGCTCACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGGTGGAGTGGCCAAACATTGACATCAGGTGTTTGGTGGCTCACCA  508

seq1  CCTTATTTTTCAAGACAGGGTCTCTCACTGAGCTTGGAGCATCCTGATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTTTTCAAGACAGGGTCTCTCACTGAGCTTGGAGCATCCTGATCT  558

seq1  GGCTGGCCAGTGAACTCTGGGGATCTGCTTGTCTCTATCTCTTCTACAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCAGTGAACTCTGGGGATCTGCTTGTCTCTATCTCTTCTACAAC  608

seq1  TGCAGTTCTAGGGTTACAGACACTTGCTACCATCATGCCTTGTTTTTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTCTAGGGTTACAGACACTTGCTACCATCATGCCTTGTTTTTGTG  658

seq1  GGGGTGGTGAGGATCCAAACTCAGGTCCTAGAGTTTGTACACTGTTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGTGAGGATCCAAACTCAGGTCCTAGAGTTTGTACACTGTTATGT  708

seq1  TCAGGGACTTGGAACTGACTAGGATGGGAGCCAGGGACTTAAGAAAATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGACTTGGAACTGACTAGGATGGGAGCCAGGGACTTAAGAAAATGG  758

seq1  GAGAGCTACACAGACATACAGTCATAAAAGTAAGATCAGGTAGTCTGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTACACAGACATACAGTCATAAAAGTAAGATCAGGTAGTCTGAGC  808

seq1  TCTTGCCTTAAGGAACTGAAGCACCCCAGAACTTCAGCATATTCAGTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCTTAAGGAACTGAAGCACCCCAGAACTTCAGCATATTCAGTATA  858

seq1  TACAGCTCGACAGAAAGGAGGGTTATTATATACACTTGGACAAGGAGGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTCGACAGAAAGGAGGGTTATTATATACACTTGGACAAGGAGGCC  908

seq1  TGAGTTATTACATACAGATAAACAAGGTAATCTAGGCAGGAGCAGTCTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTATTACATACAGATAAACAAGGTAATCTAGGCAGGAGCAGTCTCT  958

seq1  GTAAGGGAGCAGTATTCAGGTTGTAAATATTCATGGAGAGAAAGCTATGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGAGCAGTATTCAGGTTGTAAATATTCATGGAGAGAAAGCTATGA  1008

seq1  TATACATTTTTGGTTCACACTATCAACATTCCTACTTAGACCAGAGGAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATTTTTGGTTCACACTATCAACATTCCTACTTAGACCAGAGGAAA  1058

seq1  ACTATCATTCCTTCATAGATCTGAAGCTCTGGGGGCTCTGACATGGCCAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCATTCCTTCATAGATCTGAAGCTCTGGGGGCTCTGACATGGCCAG  1108

seq1  TTCCTGTCAACACACACATTTACTCAGGAATTC  1183
      |||||||||||||||||||||||||||||||||
seq2  TTCCTGTCAACACACACATTTACTCAGGAATTC  1141


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