BAC Information

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BAC

Clone NameB6Ng01-256P03
ChromosomeX (Build37)10 (Build37)
Map Location 63,304,231 - 63,304,37322,212,631 - 22,213,513
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC671840
Downstream geneSlitrk2, LOC666824, LOC627734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256P03.bB6Ng01-256P03.g
ACCGA062774GA062775
length1,025889
definitionB6Ng01-256P03.b B6Ng01-256P03.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(63,304,231 - 63,304,373)(22,212,631 - 22,213,513)
sequence
gaattcatgaacctgataaacaaaattcagcaaagtggctggatatacaa
ttaactcaaacaaatcagtagccttcctctactcataggataaatgggct
gagaaagaaattagtgaaatggcacccttcacaatagttagaaataatat
aaaataccttgatgcatgtgactttaaccaagtaaatgaaaaatctgtat
gacaagaacttaaagtctctgaagaaagcaattaaagaagatctcagaag
atggaaagatctcccatgctcatggattggcaggattagtgtagtaaaaa
tggccatcttgccaaaagcaatctacagattcaatataatccccatcaaa
attccagctcaattctttgtagagttagaaagagcaattctcaaattcat
ttggaataacaaaaaaacccaagatagagtaaactattctcaacaataaa
agaacatctgggggaaatcaccatctctgacctaaagctgtattacagag
caatagtggtatatgctgtacagtttatatcactattgctctgtaataca
ggtagaacaatggaacagaattgaagacccagaaatgaacccacacatct
atggtcacttggtctttgacaaaggagccaaaaccatccagtggaaaaaa
gacagcattttcaataaatggtgatggttgaactgtcagtcagcttgacc
aggacaccaatggcttatgccctaagatcaataattgacaaatgggacct
cataaaattgcaaagcttctgtaaggcaaaggatactgtcaataggacaa
aatggcaaccaacacattggtaaaagatctttaccaaccctacatctaat
agagggctaatatccagtatataccaggtacgagctagagaaagtaccca
agaggcaaaggggtctgcaaccctataggtggaacaacaatatgaactaa
ccagtacctccagaactcgtgtctctagttccatatgtagcagaggatgg
cctagtcagccatcattggaaagtg

gaattccatcaccctgggcccaaggggagttctaacatctcataccacaa
catgtatgaccttattagttaatggagtgatttcatgcatagttaaaatc
atgccacgtagggcagacttctaactggcacacaggagataggtatatat
gcaggaaggctggagttttgctattacaagtccaggagtttccagatgtg
gggcaaattgttcctcggagaccagagcaaacctggcctgtcatatttgg
attcagaagcctggccccaagatctgtgagaccacgtttgtttccataaa
ccactcagcttgcggtacaactttctcacttctctagcagaatccaaagg
tatggcacagctgtggtctatagagaaatatttctaatgagtattgtatc
aagcgataaagttgtatgctctaacacagggacatcggtggccgtgagag
aacaggttggtgactttctatatataaacgttgaggagaggaagagagtg
agtgtgtaggattgtgaaacctcaaggtattagctggaaatcacatattc
ttattcatcaagtaattttgagtatgctttgaagcaaacactgtcccttc
tttgatgacgtagtgctgagtcagttacctgctgtggtagatctcctgag
acggacccatttccctaggacatggaaaaaaagtccttctcttacatggg
gctatggggacggagcttttccaatgacataaggacagtgagccaggaaa
ttataaccacctgcaaagctttaagtcgggtttagttttgccttagtttc
ctaaaagtagaggcatcaatgttaattatagtgtctgacgtttgttttgt
ttgcggggcgggggggcattgccttgtttggttggtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_63304231_63304373
seq2: B6Ng01-256P03.b_929_1069

seq1  AGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGATG  50
      ||||||||||||||||||| |||  |||||| ||||||||||||||| ||
seq2  AGCTAGAGAAAGTACCCAA-GAGGCAAAGGGGTCTGCAACCCTATAGGTG  49

seq1  GAACAACAATATGAACTAACCAGTACCCCCTGGAGCTCGTGTCTCTAGCT  100
      ||||||||||||||||||||||||||| ||  || ||||||||||||| |
seq2  GAACAACAATATGAACTAACCAGTACCTCC-AGAACTCGTGTCTCTAGTT  98

seq1  GCATATGAATCAGAAGATGACCTAGTCAGCCATCACTGGAAAG  143
       |||||| | |||| |||| ||||||||||||||| |||||||
seq2  CCATATGTAGCAGAGGATGGCCTAGTCAGCCATCATTGGAAAG  141


seq1: chr10_22212631_22213513
seq2: B6Ng01-256P03.g_67_954 (reverse)

seq1  AAACCAA-CAAACAA-GCAATGCCCCCCCGCCCCGCAAACAAAAC-AACG  47
      ||||||| ||||||| ||||||||||||||||||||||||||||| ||||
seq2  AAACCAACCAAACAAGGCAATGCCCCCCCGCCCCGCAAACAAAACAAACG  50

seq1  TCAGACACTATAATTAACATTGATGCCTCTACTTTTA-GAAACTAAGGCA  96
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCAGACACTATAATTAACATTGATGCCTCTACTTTTAGGAAACTAAGGCA  100

seq1  AAACTAAACCCGACTT-AAGCTTTGCAGGTGGTTATAATTTCCTTGGCTC  145
      |||||||||||||||| |||||||||||||||||||||||||| ||||||
seq2  AAACTAAACCCGACTTAAAGCTTTGCAGGTGGTTATAATTTCC-TGGCTC  149

seq1  ACTGTCCTTATGTCATTGG-AAAGCTCCGTCCCCATAGCCCCATGTAAGA  194
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACTGTCCTTATGTCATTGGAAAAGCTCCGTCCCCATAGCCCCATGTAAGA  199

seq1  GAAGGACTTTTTTTCCATGTCCTAGGGAAATGGGTCCGTCTCAGGAGATC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACTTTTTTTCCATGTCCTAGGGAAATGGGTCCGTCTCAGGAGATC  249

seq1  TACCACAGCAGGTAACTGACTCAGCACTACGTCATCAAAGAAGGGACAGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACAGCAGGTAACTGACTCAGCACTACGTCATCAAAGAAGGGACAGT  299

seq1  GTTTGCTTCAAAGCATACTCAAAATTACTTGATGAATAAGAATATGTGAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTCAAAGCATACTCAAAATTACTTGATGAATAAGAATATGTGAT  349

seq1  TTCCAGCTAATACCTTGAGGTTTCACAATCCTACACACTCACTCTCTTCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCTAATACCTTGAGGTTTCACAATCCTACACACTCACTCTCTTCC  399

seq1  TCTCCTCAACGTTTATATATAGAAAGTCACCAACCTGTTCTCTCACGGCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCAACGTTTATATATAGAAAGTCACCAACCTGTTCTCTCACGGCC  449

seq1  ACCGATGTCCCTGTGTTAGAGCATACAACTTTATCGCTTGATACAATACT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGATGTCCCTGTGTTAGAGCATACAACTTTATCGCTTGATACAATACT  499

seq1  CATTAGAAATATTTCTCTATAGACCACAGCTGTGCCATACCTTTGGATTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAAATATTTCTCTATAGACCACAGCTGTGCCATACCTTTGGATTC  549

seq1  TGCTAGAGAAGTGAGAAAGTTGTACCGCAAGCTGAGTGGTTTATGGAAAC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAGAAGTGAGAAAGTTGTACCGCAAGCTGAGTGGTTTATGGAAAC  599

seq1  AAACGTGGTCTCACAGATCTTGGGGCCAGGCTTCTGAATCCAAATATGAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTGGTCTCACAGATCTTGGGGCCAGGCTTCTGAATCCAAATATGAC  649

seq1  AGGCCAGGTTTGCTCTGGTCTCCGAGGAACAATTTGCCCCACATCTGGAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGGTTTGCTCTGGTCTCCGAGGAACAATTTGCCCCACATCTGGAA  699

seq1  ACTCCTGGACTTGTAATAGCAAAACTCCAGCCTTCCTGCATATATACCTA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGGACTTGTAATAGCAAAACTCCAGCCTTCCTGCATATATACCTA  749

seq1  TCTCCTGTGTGCCAGTTAGAAGTCTGCCCTACGTGGCATGATTTTAACTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGTGTGCCAGTTAGAAGTCTGCCCTACGTGGCATGATTTTAACTA  799

seq1  TGCATGAAATCACTCCATTAACTAATAAGGTCATACATGTTGTGGTATGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAAATCACTCCATTAACTAATAAGGTCATACATGTTGTGGTATGA  849

seq1  GATGTTAGAACTCCCCTTGGGCCCAGGGTGATGGAATTC  883
      |||||||||||||||||||||||||||||||||||||||
seq2  GATGTTAGAACTCCCCTTGGGCCCAGGGTGATGGAATTC  888


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