BAC Information

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BAC

Clone NameB6Ng01-257D24
ChromosomeX (Build37)
Map Location 135,053,801 - 135,054,911
singlet/doubletsinglet
Overlap geneIl1rapl2
Upstream gene1700025D03Rik
Downstream geneNrk, Serpina7, 4930513O06Rik, 4933428M09Rik, Mum1l1, LOC675062, Trap1a, C330013F16Rik, EG666359, D330045A20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257D24.bB6Ng01-257D24.g
ACCGA062998GA062999
length7791,108
definitionB6Ng01-257D24.b B6Ng01-257D24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagtggctcatgttctaagatcaacaattggtaaatgggacctc
atggaaatggaaagcttctgtaagggaaaagatatagtcgataagacaaa
ttggcaatgtacagactgggaaaaaaattcactaaccccccccccccaca
tcctatagagggctaatgtccaaaatatataaagaactcaaaaagttaat
atcaaaaaaccaaacaacccaatcaaaaaatggggtatagaactaaaccg
agaattcacaactgaagaatcttgatggctgagaagtagaattgggaaca
aaacacccatggagggagttacagagacaaagtttggagctgagatgaaa
ggatggaccatgtagagactgccatacccagggatccatcccataatcag
cctccaaactctgacaccattgcatacactagcaagattttgctgaaagg
accctgatatagctgtctcttgtgagactatgccagggcctagcaaacac
agaagtagatgttcccagtcttggatggatcacagggcccccaatggagg
agctagagaaagtatccaaggagctggggggatctgcaaccctataggtg
gaacaacaatatgaactaaccaatacctcccagagctcgtgtctctagct
gcacatgtatcagaagatggcctagtcggccatcagtggaaagagaggcc
cattggtcatgaaaactttatatgccccagtatgggggaacgccagggcc
aagaagtggaggtgggtggggtgtgggag

gaattctcatttatttagtgagggagaccatttagtatattgactaagaa
atctagtaagtgcaggtgcagaaagggataatttattgctatcaaaacct
atgagaatgagagaaataagagcagaggtagacactttaaattataagat
gactcctctctctcttagatagagagaaaggaaaatattaagtgacattt
tgaaatagaggggaggaacttgaagcattttacattgaattgtctgtgtt
tttttattgactggatgtaatatttggttttcaaaatattattataattt
tttctgattaaaatgtaataagtgttgaaaatcctgaacaataagaaaga
ttcacttttccttctgtttggaattatgaccattgggtaaaattgaagca
ctatgaagagtagattatttatactaaaacaatcttcatgaaaaagacaa
atgaacaataaataatagaatcatttatcagcatatacagacataatgaa
tgtcaaaggagtgtttagcagagacaagagtttcatcaaataaggtgacc
atggtcttggccttgacacatgaaaacataactgacactcaactaatttt
gtacattacagggaagtatgatcccctgttctgtcaacctatgagcacct
tacttgatgtcctctactttccttttattaagagttctttatacatcaga
aggtagtaaaaactgaaatctcaggaaccaagactgagagcaataaacaa
acaaacaaacaaacacatggagaaccagtatggaaagtttacagatacag
tttgttttgtttcataaacgaaatggtcacttaggagaacaggtgttttt
aggttaacaaactacttcattgacaaagaaagtagacataatgagaactg
aatatataatctttgtagtacattcatgcatgtataataatagcaggtaa
taagtctgagctaactcatttatcagtgattcactagtgatgcaactgat
ccctcttgcatatgttcagctaagctgcctgtgcacatcataaaggctta
atcatcacacgtgccaatgcttagtagtatcttaatactcattctactca
cagactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_135053801_135054911
seq2: B6Ng01-257D24.g_64_1171 (reverse)

seq1  ATAGTTCTGTGAAGTAGGATGAGTA-TAAGATACTACTAACCATTGGCAC  49
      |||| |||||| ||||| ||||||| |||||||||||||| |||||||||
seq2  ATAG-TCTGTG-AGTAGAATGAGTATTAAGATACTACTAAGCATTGGCAC  48

seq1  GTGTGATGATTAAAGCCTTTATGATGTGCACAGGCAGCTTAGCTGAACAT  99
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATGATT-AAGCCTTTATGATGTGCACAGGCAGCTTAGCTGAACAT  97

seq1  ATGCAAGAGGGATCAGTTGCATCACTAGTGAATCACTGATTAATGAGTTA  149
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATGCAAGAGGGATCAGTTGCATCACTAGTGAATCACTGATAAATGAGTTA  147

seq1  GCTCAGACTTATTACCCTGCTATTATTATACATGCATGAATGTACTACAA  199
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCTCAGACTTATTA-CCTGCTATTATTATACATGCATGAATGTACTACAA  196

seq1  AGATTATATATTCAGTTCTCATTATGTCTACTTTCTTTGTCAATGAAGTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATATATTCAGTTCTCATTATGTCTACTTTCTTTGTCAATGAAGTA  246

seq1  GTTTGTTAACCTAAAAACACCTGTTCTCCTAAGTGACCATTTCGTTTATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTAACCTAAAAACACCTGTTCTCCTAAGTGACCATTTCGTTTATG  296

seq1  AAACAAAACAAACTGTATCTGTAAACTTTCCATACTGGTTCTCCATGTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAACTGTATCTGTAAACTTTCCATACTGGTTCTCCATGTGT  346

seq1  TTGTTTGTTTGTTTGTTTATTGCTCTCAGTCTTGGTTCCTGAGATTTCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTGTTTATTGCTCTCAGTCTTGGTTCCTGAGATTTCAG  396

seq1  TTTTTACTACCTTCTGATGTATAAAGAACTCTTAATAAAAGGAAAGTAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTACCTTCTGATGTATAAAGAACTCTTAATAAAAGGAAAGTAGA  446

seq1  GGACATCAAGTAAGGTGCTCATAGGTTGACAGAACAGGGGATCATACTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCAAGTAAGGTGCTCATAGGTTGACAGAACAGGGGATCATACTTC  496

seq1  CCTGTAATGTACAAAATTAGTTGAGTGTCAGTTATGTTTTCATGTGTCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAATGTACAAAATTAGTTGAGTGTCAGTTATGTTTTCATGTGTCAA  546

seq1  GGCCAAGACCATGGTCACCTTATTTGATGAAACTCTTGTCTCTGCTAAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGACCATGGTCACCTTATTTGATGAAACTCTTGTCTCTGCTAAAC  596

seq1  ACTCCTTTGACATTCATTATGTCTGTATATGCTGATAAATGATTCTATTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTTGACATTCATTATGTCTGTATATGCTGATAAATGATTCTATTA  646

seq1  TTTATTGTTCATTTGTCTTTTTCATGAAGATTGTTTTAGTATAAATAATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTTCATTTGTCTTTTTCATGAAGATTGTTTTAGTATAAATAATC  696

seq1  TACTCTTCATAGTGCTTCAATTTTACCCAATGGTCATAATTCCAAACAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTCATAGTGCTTCAATTTTACCCAATGGTCATAATTCCAAACAGA  746

seq1  AGGAAAAGTGAATCTTTCTTATTGTTCAGGATTTTCAACACTTATTACAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGTGAATCTTTCTTATTGTTCAGGATTTTCAACACTTATTACAT  796

seq1  TTTAATCAGAAAAAATTATAATAATATTTTGAAAACCAAATATTACATCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCAGAAAAAATTATAATAATATTTTGAAAACCAAATATTACATCC  846

seq1  AGTCAATAAAAAAACACAGACAATTCAATGTAAAATGCTTCAAGTTCCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATAAAAAAACACAGACAATTCAATGTAAAATGCTTCAAGTTCCTC  896

seq1  CCCTCTATTTCAAAATGTCACTTAATATTTTCCTTTCTCTCTATCTAAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTATTTCAAAATGTCACTTAATATTTTCCTTTCTCTCTATCTAAGA  946

seq1  GAGAGAGGAGTCATCTTATAATTTAAAGTGTCTACCTCTGCTCTTATTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGGAGTCATCTTATAATTTAAAGTGTCTACCTCTGCTCTTATTTC  996

seq1  TCTCATTCTCATAGGTTTTGATAGCAATAAATTATCCCTTTCTGCACCTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCTCATAGGTTTTGATAGCAATAAATTATCCCTTTCTGCACCTG  1046

seq1  CACTTACTAGATTTCTTAGTCAATATACTAAATGGTCTCCCTCACTAAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACTAGATTTCTTAGTCAATATACTAAATGGTCTCCCTCACTAAAT  1096

seq1  AAATGAGAATTC  1111
      ||||||||||||
seq2  AAATGAGAATTC  1108


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