BAC Information

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BAC

Clone NameB6Ng01-259P16
ChromosomeX (Build37)
Map Location 114,920,374 - 114,921,559
singlet/doubletsinglet
Overlap geneLOC665066
Upstream geneLOC100039300, EG665045, LOC100039319, LOC624284
Downstream geneEG624388, ENSMUSG00000072994, LOC100039551, Tgifx1, LOC665087
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259P16.bB6Ng01-259P16.g
ACCGA065022GA065023
length1,0311,188
definitionB6Ng01-259P16.b B6Ng01-259P16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctctatctttgttgggtctttttgtggtttaggtatcagagtaa
ttgtggcttcataaaatgagttgggtagagtaccttccctttctattttg
tggaatagtttgtgaagaactggaattaggtcttctttgaaggtctgata
gaactctgcactaaacccatctggtcctgggcttttttttttttggttgg
gagactattaatgactgcttctattctttaggggatacaggactgtttag
atcattaacctgatcttgatttagctttggtacctggtatctgtctagaa
acttgtcaatttcatccaggtttaacagttttgttaagtatagccttttg
tagaaggatctgatgttgttttggatttcttcaggatctgttgttatgtt
tcccttttcatttctgattttgttaattaggatgctttccctgtgccctc
tagtgagtctggctaagggtttatctatcttgttgattttatcaaagaac
cagctccttcattggttgattctttgaatagttcttcttgtttccacttg
gttgatttcacccctgagtttgattatttcctgccttctactcctcttgg
gtgaattttcttccttttgttctagagcttttaggtgtgttgtcaagctg
ctaatgtgtgctctctctagtttcttttggaggcactcagagctatgagt
tttcctcttagaaatgctttcattgtgtcccataagtttgggtatgttgt
ggctttattttcattaaactccaaaaagtccttaatttctttctttattc
cttccttgatcaagttatcatttagaagagtgttttttagtttccacgtg
aatgttggctttctataggttagtttgttattgaagatcagccttagtcc
atggtgatctgataggatacatgggacaatttcaatatttttgtatatgt
tgaggcttgtttgtgaccaattatgtggtcagtttagagaagttacatgg
ggtgctgagaaagaggtatatgctttttgtt
gaattctctaccaaagtaactccaatatatgtagtatggaaatgtagaca
tatataaaagcatagataagaatgaatgcttaatgacagactgtataccc
cagaaaattcaatttattatccatgaaccaaatttgatatctgaaagatg
atttactctatgaggcttgacaacaaaactctttatagttgtttattatt
agcattgaaaatcttacaatatatcacgttccaatatcatagaaatctca
agcattctaaaacaggaaaaaacaaagttatgttgagaataagtgaattt
aatttcagaatgaaatatagaaaatacttagaagctaccaactaaaattt
taaaatacattcatatactatatactccactacataataaaaataaccta
aaacagagaaataataaagacataggcaaaaatttccctaataaaaatat
tactagaaatcaagctgtcaaaatataaataaaaattataatatcagtag
tatttgggtagcttacaactgcctataactcaagtctgggagatatgact
cttacctctggcattctcagtcagactcatgcagggaatatatattgaca
ttaaaacacacatgcacacattcaaacacaaacacatatacacatacaca
caaataaaaatagtaaatgcaaaaatttttcattctagaaaatcagtaga
taacaaagactacagcgataatagataacaaaatatcacaggaagtgctg
tgaacatttgaggctattttactcatgttgttctggtaagttctccaatc
ctgtcactgcgtttttcagctattctattagttttggttgaagaatctca
caaggagaaagaaatccaatctagaatatatgtctatctcaataaaagaa
aagactgtgcgtctctttatggaaaagactcaatgcaactaatctgtcac
catgtagtatactttttcaaggaaaaaataccatgatggacaatcaatga
tattctatgctactggatcttttgtagctatatcagctcagtgagtctat
tctatagtgcttaatgcataagatagctgattactattggatattttaat
cagagcacactgaatgattaaacatattatggaaagaattcactatatct
acttaatatccactcttaagccacctttagattattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_114920374_114921559
seq2: B6Ng01-259P16.g_67_1254

seq1  GAATTCTCTACCAAAGTAACTCCAATATATGTAGTATGGAAATGTAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACCAAAGTAACTCCAATATATGTAGTATGGAAATGTAGACA  50

seq1  TATATAAAAGCATAGATAAGAATGAATGCTTAATGACAGACTGTATACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAAAGCATAGATAAGAATGAATGCTTAATGACAGACTGTATACCC  100

seq1  CAGAAAATTCAATTTATTATCCATGAACCAAATTTGATATCTGAAAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATTCAATTTATTATCCATGAACCAAATTTGATATCTGAAAGATG  150

seq1  ATTTACTCTATGAGGCTTGACAACAAAACTCTTTATAGTTGTTTATTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTCTATGAGGCTTGACAACAAAACTCTTTATAGTTGTTTATTATT  200

seq1  AGCATTGAAAATCTTACAATATATCACGTTCCAATATCATAGAAATCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGAAAATCTTACAATATATCACGTTCCAATATCATAGAAATCTCA  250

seq1  AGCATTCTAAAACAGGAAAAAACAAAGTTATGTTGAGAATAAGTGAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCTAAAACAGGAAAAAACAAAGTTATGTTGAGAATAAGTGAATTT  300

seq1  AATTTCAGAATGAAATATAGAAAATACTTAGAAGCTACCAACTAAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGAATGAAATATAGAAAATACTTAGAAGCTACCAACTAAAATTT  350

seq1  TAAAATACATTCATATACTATATACTCCACTACATAATAAAAATAACCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACATTCATATACTATATACTCCACTACATAATAAAAATAACCTA  400

seq1  AAACAGAGAAATAATAAAGACATAGGCAAAAATTTCCCTAATAAAAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGAAATAATAAAGACATAGGCAAAAATTTCCCTAATAAAAATAT  450

seq1  TACTAGAAATCAAGCTGTCAAAATATAAATAAAAATTATAATATCAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGAAATCAAGCTGTCAAAATATAAATAAAAATTATAATATCAGTAG  500

seq1  TATTTGGGTAGCTTACAACTGCCTATAACTCAAGTCTGGGAGATATGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGGTAGCTTACAACTGCCTATAACTCAAGTCTGGGAGATATGACT  550

seq1  CTTACCTCTGGCATTCTCAGTCAGACTCATGCAGGGAATATATATTGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTCTGGCATTCTCAGTCAGACTCATGCAGGGAATATATATTGACA  600

seq1  TTAAAACACACATGCACACATTCAAACACAAACACATATACACATACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACACACATGCACACATTCAAACACAAACACATATACACATACACA  650

seq1  CAAATAAAAATAGTAAATGCAAAAATTTTTCATTCTAGAAAATCAGTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAAAATAGTAAATGCAAAAATTTTTCATTCTAGAAAATCAGTAGA  700

seq1  TAACAAAGACTACAGCGATAATAGATAACAAAATATCACAGGAAGTGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAGACTACAGCGATAATAGATAACAAAATATCACAGGAAGTGCTG  750

seq1  TGAACATTTGAGGCTATTTTACTCATGTTGTTCTGGTAAGTTCTCCAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTTGAGGCTATTTTACTCATGTTGTTCTGGTAAGTTCTCCAATC  800

seq1  CTGTCACTGCGTTTTTCAGCTATTCTATTAGTTTTGGTTGAAGAATCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACTGCGTTTTTCAGCTATTCTATTAGTTTTGGTTGAAGAATCTCA  850

seq1  CAAGGAGAAAGAAATCCAAATCTAGAATATATGTCTATCTCAATAAAAGA  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CAAGGAGAAAGAAATCC-AATCTAGAATATATGTCTATCTCAATAAAAGA  899

seq1  AAAGACTGTGCGTCTCTTTATGGAAAAGACTCAATGCAACTAATCTGTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTGTGCGTCTCTTTATGGAAAAGACTCAATGCAACTAATCTGTCA  949

seq1  CCATGTAGTATACTTTTTCAAGGAAAAAATACCATGATGGACAATCAATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAGTATACTTTTTCAAGGAAAAAATACCATGATGGACAATCAATG  999

seq1  ATATTCTATGCTACTGGATC-TTTGTAGCTATATCAGCTTCAGTGAGTCT  1049
      |||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  ATATTCTATGCTACTGGATCTTTTGTAGCTATATCAGC-TCAGTGAGTCT  1048

seq1  ATTCTATAGTGCTTAATGCAT-AGATAGCCTGAATTACTA-TGGATATTT  1097
      ||||||||||||||||||||| |||||| ||| ||||||| |||||||||
seq2  ATTCTATAGTGCTTAATGCATAAGATAG-CTG-ATTACTATTGGATATTT  1096

seq1  TAATCAAGAGCACACTGAGTGA-TAAACATA-TATGGAAAAGATATTCAC  1145
      ||||| |||||||||||| ||| |||||||| ||||| ||||| ||||||
seq2  TAATC-AGAGCACACTGAATGATTAAACATATTATGG-AAAGA-ATTCAC  1143

seq1  TTATATCTACTTAATATCCA-TCTT-AGCCAC--TTAG-TTATTAT  1186
       ||||||||||||||||||| |||| ||||||  |||| |||||||
seq2  -TATATCTACTTAATATCCACTCTTAAGCCACCTTTAGATTATTAT  1188