BAC Information

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BAC

Clone NameB6Ng01-261G07
ChromosomeX (Build37)
Map Location 143,787,363 - 143,788,465
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666730, EG245663, Htr2c
Downstream geneIl13ra2, V1rb10, Lrch2, LOC100039462, LOC666789, LOC434863, EG623995, EG624023, LOC666184, LOC100039511, LOC666812, LOC100039519, LOC434864, EG624096, LOC100039545
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261G07.bB6Ng01-261G07.g
ACCGA066074GA066075
length1,2021,099
definitionB6Ng01-261G07.b B6Ng01-261G07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctctaccccatatttttttaaataaggttattt
ggttctttggagtctaacttcttgaattctttgtatacattgggtattaa
ccctctatgggatgtaggattggtaaagattttatcctattgacagtgtc
ctttgccttacagaagctttgcccttttatgaggtcccatttgttgattc
ttgatcttacagcataagccattgatgtcctattcaggaattttccccct
gtgcccatgtgttcaaggatcttgcccatgttctcctctataagcttcag
tctatctggctttatgcagggtccttgatccacttagacttgagctttgt
acaaggagataagaatggatcaatattcatttttctacatgctgaccacc
agttgaaccagcaccatttgttaaaaatgctgtcttttttccactggatg
gtttttgctcctttgttaaagatcaagtggccataggtgtgtgggttcat
ttctggatctccagttctatcccaatgatcttcctgcatgtctctgtacc
aataccatggcgttttttgtgttttgttttttaatcactattgcactatt
gctctctaatacagcttgagatctgtgatggtgatttcccccagaagttc
ttttattattgaaagtagtttttgctatcttaggtttttttgttattcta
aatgaatttgcaaattgctctttctttctttctttctttctttctttctt
tcttttttgttttttgtttgtttgtttgtttgtttgtttggtttttcaag
acagggtttttctctgtatagccctggctgtcctggaactcactctgtag
accaggctggcctcaaactcagaaatcctctgcctcccaagtgctaggat
taaaggcacacaccaccactgcctggccaaattgctctttctaactctat
gaagaattggtttggaatttgatggggattgcattgaatctttagattgc
tttcagaaagatgccattttactataattaatcctgccatccatgagcat
gggagaatctttgttcctttttgtattatgcatgaatacatgattggatt
gatccgattgattgtttggtggtgatgtagatgagcaaggatttctcggt
atgaccatgcagcattgtccgaggcatctgtaaacctaggctgactacta
aa
gaattcagcacagcgacacactattggcttattcaaacattaacagaaag
attacatgtacgtgcggggtgtcagagttctgtgagttgttgactcagtt
cagatagccctgttatgtcttcacattccctttatcttatggtcaagatg
ttcccaggaatgttttaactacggggcatacccgggtttgtttttctctt
ttctcagccccaggcagcctctaggctcacaaacaaccagcaatttctga
gtactttatatgacttacaggtcttgaaatttcatctttctttcagttgt
gaatcacattttggaagttgggaaattaacccaagtcctctgtaaaagca
gccagcagccagtgctcttaatccctgaaccatctctccagtcatttata
taaaccttatcagtataatttgtttaaaaatatttaatgtttgttttaaa
ataagaaacttaaaaaaaagaatgagttatcctatttgagtaatgttgat
gactgagttgttaattatattacgtacaaaactacaattcaccaaaccaa
ttaaagtaaatgtggtatagaaatcctgaattgtcctataattatcaaaa
acactctttaaaatttttcatataaagtaaatagtggacttagattattt
ttgatgtttaatagtctactaacaagggaaggattacttaaatatcatta
gatatttccagaaaccataggagaacaaatgactaatttaattctaagat
taaaacaagacgtcttgactttaaagacaccatatagacaagtgtcttga
atcaaggcagataaagtagctattagcccatgtgagatatagtttagtac
ctacgagcaatagctggtcttccagaggaccagggtttgattcccagtac
ccacttggaggttcacaattatcagtatctccaatcccagggatacaaca
ccaccctttgggtttgcctcccaggacacagacaccttgcatagtgcaca
aacacacatgcagacaaacagcccttttatataattccaaatacataaaa
tttgaaacacagtagaaactattatacataaaataaaatacatactaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_143787363_143788465
seq2: B6Ng01-261G07.g_66_1164

seq1  GAATTCAGCACAGCGACACACTATTGGCTTATTCAAACATTAACAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCACAGCGACACACTATTGGCTTATTCAAACATTAACAGAAAG  50

seq1  ATTACATGTACGTGCGGGGTGTCAGAGTTCTGTGAGTTGTTGACTCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGTACGTGCGGGGTGTCAGAGTTCTGTGAGTTGTTGACTCAGTT  100

seq1  CAGATAGCCCTGTTATGTCTTCACATTCCCTTTATCTTATGGTCAAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGCCCTGTTATGTCTTCACATTCCCTTTATCTTATGGTCAAGATG  150

seq1  TTCCCAGGAATGTTTTAACTACGGGGCATACCCGGGTTTGTTTTTCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGAATGTTTTAACTACGGGGCATACCCGGGTTTGTTTTTCTCTT  200

seq1  TTCTCAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCCCCAGGCAGCCTCTAGGCTCACAAACAACCAGCAATTTCTGA  250

seq1  GTACTTTATATGACTTACAGGTCTTGAAATTTCATCTTTCTTTCAGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTATATGACTTACAGGTCTTGAAATTTCATCTTTCTTTCAGTTGT  300

seq1  GAATCACATTTTGGAAGTTGGGAAATTAACCCAAGTCCTCTGTAAAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACATTTTGGAAGTTGGGAAATTAACCCAAGTCCTCTGTAAAAGCA  350

seq1  GCCAGCAGCCAGTGCTCTTAATCCCTGAACCATCTCTCCAGTCATTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAGCCAGTGCTCTTAATCCCTGAACCATCTCTCCAGTCATTTATA  400

seq1  TAAACCTTATCAGTATAATTTGTTTAAAAATATTTAATGTTTGTTTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTTATCAGTATAATTTGTTTAAAAATATTTAATGTTTGTTTTAAA  450

seq1  ATAAGAAACTTAAAAAAAAGAATGAGTTATCCTATTTGAGTAATGTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAACTTAAAAAAAAGAATGAGTTATCCTATTTGAGTAATGTTGAT  500

seq1  GACTGAGTTGTTAATTATATTACGTACAAAACTACAATTCACCAAACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGTTGTTAATTATATTACGTACAAAACTACAATTCACCAAACCAA  550

seq1  TTAAAGTAAATGTGGTATAGAAATCCTGAATTGTCCTATAATTATCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAAATGTGGTATAGAAATCCTGAATTGTCCTATAATTATCAAAA  600

seq1  ACACTCTTTAAAATTTTTCATATAAAGTAAATAGTGGACTTAGATTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTTTAAAATTTTTCATATAAAGTAAATAGTGGACTTAGATTATTT  650

seq1  TTGATGTTTAATAGTCTACTAACAAGGGAAGGATTACTTAAATATCATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTTTAATAGTCTACTAACAAGGGAAGGATTACTTAAATATCATTA  700

seq1  GATATTTCCAGAAACCATAGGAGAACAAATGACTAATTTAATTCTAAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTCCAGAAACCATAGGAGAACAAATGACTAATTTAATTCTAAGAT  750

seq1  TAAAACAAGACGTCTTGACTTTAAAGACACCATATAGACAAGTGTCTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAGACGTCTTGACTTTAAAGACACCATATAGACAAGTGTCTTGA  800

seq1  ATCAAGGCAGATAAAGTAGCTATTAGCCCATGTGAGATATAGTTTAGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGCAGATAAAGTAGCTATTAGCCCATGTGAGATATAGTTTAGTAC  850

seq1  CTACGAGCAATAGCTGGTCTTCCAGAGGACCAGGGTTTGATTCCCAGTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGAGCAATAGCTGGTCTTCCAGAGGACCAGGGTTTGATTCCCAGTAC  900

seq1  CCACTTGGAGGTTCACAATTATCAGTATCTCCAATCCCAGGGATACAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGGAGGTTCACAATTATCAGTATCTCCAATCCCAGGGATACAACA  950

seq1  CCACCCTTT-GGTTTGCCTCCCAGGACACAAGACACC-TGCATAGTGCAC  998
      ||||||||| ||||||||||||||||||| ||||||| ||||||||||||
seq2  CCACCCTTTGGGTTTGCCTCCCAGGACAC-AGACACCTTGCATAGTGCAC  999

seq1  AAACACACATGCAGACAAAACAGCCC-TTTATATAA-TCCAAATACATAA  1046
      |||||||||||||||| ||||||||| ||||||||| |||||||||||||
seq2  AAACACACATGCAGAC-AAACAGCCCTTTTATATAATTCCAAATACATAA  1048

seq1  AATTTGAAAACACAAGTAGAAACTAATTATACATAAAAATAAAAATACAT  1096
      |||||| |||||| |||||||||| |||||||||||||   |||||||| 
seq2  AATTTG-AAACAC-AGTAGAAACT-ATTATACATAAAA--TAAAATACA-  1092

seq1  TACTAGA  1103
      |||||||
seq2  TACTAGA  1099