BAC Information

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BAC

Clone NameB6Ng01-261H15
ChromosomeX (Build37)
Map Location 123,470,291 - 123,471,400
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626048, LOC100040410, LOC100039903, LOC665679, 4932411N23Rik, Gm381
Downstream geneLOC100040472, Gm382, 4921511C20Rik, 4930412D23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261H15.bB6Ng01-261H15.g
ACCGA066137GA066138
length1,1701,102
definitionB6Ng01-261H15.b B6Ng01-261H15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaggtcagtctggcggttcctca
gaagattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatgtatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaaagtaccaaggagctaaagggatctgcaaccct
ataggtggaacacattatgaactaacagtaccccggagatcttgactcta
gctgcatatgtatcaaaagatgactagtcgtcatcactggcaaagagagt
ccatgacatgcaactttatatgcccagtacaggtacgctaaggtcaaagg
gaatggggttggttagggaa

gaattcagctttcctatctcctctgccctgtcataagctgaatcagttct
tttattgcccaatcagagatgatggagaacaatttttacataacattgat
attggagatgtttgaccatgccatattttgcactgtagacagaagcttga
gctaaaaatcagtatctgggttggtgagatggctcagtgggtaagagcac
ccgactgctcttctgaaggtcctgagttcaagtcccagcaaccacatggt
ggctcacaaccatccgtaaggagatctgactggtgtgtctgaagacagct
gcagtgtacttacatataataaataaataaataaataaataaataaataa
ataaataaataaataaataaatatcagtatctgagtatacagtactcgga
tagaaaataaacatgggaaaacattggatccaaagtgcattgtacattag
ccaaaaccccatggaccaactggctttcacaagccccctcactttaactg
ttgaaccacactgcttaggtagctatttggaaaaaagttgtaattcaaaa
ccaacatacaataaactctccataggacaacgaatttatctatgcttaca
tcaacctgttcatattcttcccagcaaagataaagtttccaattaatgta
tttcctctttttctattcttgtaataaaatactatggacaagcaaattta
ctgaaaaaagaatataattcagcttatagtttcagagagttagaatccct
tacgggtagccaaaggcatagtagtaactgcaggaagttgaggggtcaca
tgttgaacaagaagaatgaaagagaacaaacatgaagtggtctgagtctt
ttttctctcaaaagtccatctttagtgacaaacctcatctaacaagccca
cacttccttagcttcccaaaatagtgccataactggtaatccaatattca
aatgcctgagatatagagaatatttatcactcaaaccaacacatatgtta
gaataaaaattgcactacagactttctcttatgagaacagaatagactgc
atgagcctgccaatgctgacaagcagagtaactcctcaagtgtagaatga
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_123470291_123471400
seq2: B6Ng01-261H15.g_66_1167

seq1  GAATTCAGCTTTCCTATCTCCTCTGCCCTGTCATAAGCTGAATCAGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTTCCTATCTCCTCTGCCCTGTCATAAGCTGAATCAGTTCT  50

seq1  TTTATTGCCCAATCAGAGATGATGGAGAACAATTTTTACATAACATTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGCCCAATCAGAGATGATGGAGAACAATTTTTACATAACATTGAT  100

seq1  ATTGGAGATGTTTGACCATGCCATATTTTGCACTGTAGACAGAAGCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGATGTTTGACCATGCCATATTTTGCACTGTAGACAGAAGCTTGA  150

seq1  GCTAAAAATCAGTATCTGGGTTGGTGAGATGGCTCAGTGGGTAAGAGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAAATCAGTATCTGGGTTGGTGAGATGGCTCAGTGGGTAAGAGCAC  200

seq1  CCGACTGCTCTTCTGAAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTGCTCTTCTGAAGGTCCTGAGTTCAAGTCCCAGCAACCACATGGT  250

seq1  GGCTCACAACCATCCGTAAGGAGATCTGACTGGTGTGTCTGAAGACAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACAACCATCCGTAAGGAGATCTGACTGGTGTGTCTGAAGACAGCT  300

seq1  GCAGTGTACTTACATATAATAAATAAATAAATAAATAAATAAATAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTACTTACATATAATAAATAAATAAATAAATAAATAAATAAATAA  350

seq1  ATAAATAAATAAATAAATAAATATCAGTATCTGAGTATACAGTACTCGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATAAATAAATATCAGTATCTGAGTATACAGTACTCGGA  400

seq1  TAGAAAATAAACATGGGAAAACATTGGATCCAAAGTGCATTGTACATTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATAAACATGGGAAAACATTGGATCCAAAGTGCATTGTACATTAG  450

seq1  CCAAAACCCCATGGACCAACTGGCTTTCACAAGCCCCCTCACTTTAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACCCCATGGACCAACTGGCTTTCACAAGCCCCCTCACTTTAACTG  500

seq1  TTGAACCACACTGCTTAGGTAGCTATTTGGAAAAAAGTTGTAATTCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCACACTGCTTAGGTAGCTATTTGGAAAAAAGTTGTAATTCAAAA  550

seq1  CCAACATACAATAAACTCTCCATAGGACAACGAATTTATCTATGCTTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATACAATAAACTCTCCATAGGACAACGAATTTATCTATGCTTACA  600

seq1  TCAACCTGTTCATATTCTTCCCAGCAAAGATAAAGTTTCCAATTAATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTGTTCATATTCTTCCCAGCAAAGATAAAGTTTCCAATTAATGTA  650

seq1  TTTCCTCTTTTTCTATTCTTGTAATAAAATACTATGGACAAGCAAATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTTTTTCTATTCTTGTAATAAAATACTATGGACAAGCAAATTTA  700

seq1  CTGAAAAAAGAATATAATTCAGCTTATAGTTTCAGAGAGTTAGAATCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAAAGAATATAATTCAGCTTATAGTTTCAGAGAGTTAGAATCCCT  750

seq1  TACGGGTAGCCAAAGGCATAGTAGTAACTGCAGGAAGTTGAGGGGTCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGTAGCCAAAGGCATAGTAGTAACTGCAGGAAGTTGAGGGGTCACA  800

seq1  TGTTGAACAAGAAGAATGAAAGAGAACAAACATGAAGTGGTCTGAGTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAACAAGAAGAATGAAAGAGAACAAACATGAAGTGGTCTGAGTCTT  850

seq1  TTTTCTCTCAAAAGTCCATCTTTAGTGACAAACCTCATCTAACAAGCCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTCAAAAGTCCATCTTTAGTGACAAACCTCATCTAACAAGCCCA  900

seq1  CACTTCCTTAGCTTCCCAAAATAGTGCCATAACTGGTAATCCAATATTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCTTAGCTTCCCAAAATAGTGCCATAACTGGTAATCCAATATTCA  950

seq1  AATGCCTGAGATTATAGAGAATATTTATCACTCAAACCAACACAATATGT  1000
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  AATGCCTGAGA-TATAGAGAATATTTATCACTCAAACCAACAC-ATATGT  998

seq1  TAGAATAAAAATTGCACTACAGAACTTTCCTCTTATGAGAACAGAATAGA  1050
      |||||||||||||||||||||| ||||| |||||||||||||||||||||
seq2  TAGAATAAAAATTGCACTACAG-ACTTT-CTCTTATGAGAACAGAATAGA  1046

seq1  CTGCATGAGCTGCCCATTGCTGACAAGCAGAGTTACTCCTCAAAGTGTTA  1100
      ||||||||||   ||| |||||||||||||||| ||||||| ||||||  
seq2  CTGCATGAGCCTGCCAATGCTGACAAGCAGAGTAACTCCTC-AAGTGT--  1093

seq1  AGAAATGAAG  1110
      || |||||||
seq2  AG-AATGAAG  1102


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