BAC Information

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BAC

Clone NameB6Ng01-262C06
ChromosomeX (Build37)
Map Location 119,155,345 - 119,156,491
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC385419, EG434907, EG245575
Downstream geneLOC100039544, Nap1l3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262C06.bB6Ng01-262C06.g
ACCGA066636GA066637
length1,1451,148
definitionB6Ng01-262C06.b B6Ng01-262C06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatccgatttgggataggtaaagatcctttcccaatctgttggtggcctt
tttttcttattgacggtgtcttttgctttgcagaagctttgcaattttat
gaggtcccatttatcgattcttgatcttaaagcacaagcctttgctgttc
tattcaggaatttcccccctgtacccatatcttcgaggcttttccctact
atctcctctataagtttcagtgtctctggttttatgtggaattccttaat
ccacttagatttgaccttagaacaaggagatagaaatggatcaattcgca
ttcttctacatgataaccaccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatctctgggtcttcaattctgttccattggt
ctacttgtctgtcactataccaataccatgcagttttgatcacaattgct
gtctagtacagctttaggtcgggcatggtgattccactagaggttctttt
atccttgagaagagtttttgctatcctcggtttttttgttattccagatg
aatctgccgattgccctttctaattcgctgaagaattgagttggaatttt
gatggggattgcattgattctgtagattgctttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttctttagagacttgaagtttttatcat
acagatctttcacttccttagagtcatgccaaggtattttatattattgt
gactattgagaaggtgctgctttccctaatttctttctcagctgttattc
ttggtgtaagagaaaggccattgactgttgagttaatttatatccagcta
cctcactggaggcatgattatcgagttcaggatgcctcggtggagtgtta
aggtcacttcattacactactctattcaccttgccaaagaggaga

gaattcagtcttttcctagcagctttcaaatgaagatgtagatctcacag
ttctgcctgtaccatatctgctggatggtgctatattcccaccttgatga
aaatggacttatcctctgaacctacaggttcaagcctgccccatttaaat
gttgtccatataattgtggcctaggtaaaggtttttgttcacagtattac
aaccccaactaagacagaagttcaccaaaagattctggtatctcttttta
ggccatacctatctttttagtttgagttttactgctgtgaacagacacca
tgaccaaggcatctctgataaaaaacaacattgaattgaggatgggttac
aggttcagaggatcattccattatcttcaaggtgggagcatggtagcatc
caggcaggcaagaagaaggctggctagaagaagtccaggaagttaggaag
agggtattaatgctcatgtacaccatgacacttttgctccaaggctacac
cacctaatagtgccactccctgggacaaatacatataaacaatcacagat
atacaatgaaacctccataatactgggttttaacagtttatcatatctat
atcatcacataaaaaggtatagaataattaaaagactggtaagacatttt
ggttgataacatgtttgctgtacgtgcatgaagatcagattctggatacc
gcaaactcttgcaatgctttgtatagtagtgcagatatatctgtctggta
tacttataagtaaatgggcaacagatagaaataaattcccagaaagtcgt
gagccactaacctgatttttatgctaatatataatcaaataccatgcttc
caacacagtagaagctaaagatgaagtcataaaattgtcccctgatttct
tcacatgaaccatggcacacaagtgtctgtacttataaaacaattataca
tatataaacacatgcatatgatttcacatatccatgctcccaaaatgaga
gtactttgggctaaatcaaatgtcaatatccctttaagtaaagacttata
gagtactggaaatgtatctgctcagagatgaatacatttaaacagttata
tagaaagatgcactaagttaaggaaaatttccattatggacctagcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_119155345_119156491
seq2: B6Ng01-262C06.g_64_1211

seq1  GAATTCAGTCTTTTCCTAGCAGCTTTCAAATGAAGATGTAGATCTCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTTTTCCTAGCAGCTTTCAAATGAAGATGTAGATCTCACAG  50

seq1  TTCTGCCTGTACCATATCTGCTGGATGGTGCTATATTCCCACCTTGATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCTGTACCATATCTGCTGGATGGTGCTATATTCCCACCTTGATGA  100

seq1  AAATGGACTTATCCTCTGAACCTACAGGTTCAAGCCTGCCCCATTTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGACTTATCCTCTGAACCTACAGGTTCAAGCCTGCCCCATTTAAAT  150

seq1  GTTGTCCATATAATTGTGGCCTAGGTAAAGGTTTTTGTTCACAGTATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCCATATAATTGTGGCCTAGGTAAAGGTTTTTGTTCACAGTATTAC  200

seq1  AACCCCAACTAAGACAGAAGTTCACCAAAAGATTCTGGTATCTCTTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAACTAAGACAGAAGTTCACCAAAAGATTCTGGTATCTCTTTTTA  250

seq1  GGCCATACCTATCTTTTTAGTTTGAGTTTTACTGCTGTGAACAGACACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATACCTATCTTTTTAGTTTGAGTTTTACTGCTGTGAACAGACACCA  300

seq1  TGACCAAGGCATCTCTGATAAAAAACAACATTGAATTGAGGATGGGTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAAGGCATCTCTGATAAAAAACAACATTGAATTGAGGATGGGTTAC  350

seq1  AGGTTCAGAGGATCATTCCATTATCTTCAAGGTGGGAGCATGGTAGCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAGAGGATCATTCCATTATCTTCAAGGTGGGAGCATGGTAGCATC  400

seq1  CAGGCAGGCAAGAAGAAGGCTGGCTAGAAGAAGTCCAGGAAGTTAGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGCAAGAAGAAGGCTGGCTAGAAGAAGTCCAGGAAGTTAGGAAG  450

seq1  AGGGTATTAATGCTCATGTACACCATGACACTTTTGCTCCAAGGCTACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATTAATGCTCATGTACACCATGACACTTTTGCTCCAAGGCTACAC  500

seq1  CACCTAATAGTGCCACTCCCTGGGACAAATACATATAAACAATCACAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAATAGTGCCACTCCCTGGGACAAATACATATAAACAATCACAGAT  550

seq1  ATACAATGAAACCTCCATAATACTGGGTTTTAACAGTTTATCATATCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATGAAACCTCCATAATACTGGGTTTTAACAGTTTATCATATCTAT  600

seq1  ATCATCACATAAAAAGGTATAGAATAATTAAAAGACTGGTAAGACATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCACATAAAAAGGTATAGAATAATTAAAAGACTGGTAAGACATTTT  650

seq1  GGTTGATAACATGTTTGCTGTACGTGCATGAAGATCAGATTCTGGATACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATAACATGTTTGCTGTACGTGCATGAAGATCAGATTCTGGATACC  700

seq1  GCAAACTCTTGCAATGCTTTGTATAGTAGTGCAGATATATCTGTCTGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTCTTGCAATGCTTTGTATAGTAGTGCAGATATATCTGTCTGGTA  750

seq1  TACTTATAAGTAAATGGGCAACAGATAGAAATAAATTCCCAGAAAGTCGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATAAGTAAATGGGCAACAGATAGAAATAAATTCCCAGAAAGTCGT  800

seq1  GAGCCACTAACCTGATTTTTATGCTAATATATAATCAAATACCATGCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACTAACCTGATTTTTATGCTAATATATAATCAAATACCATGCTTC  850

seq1  CAACACAGTAGAAGCTAAAGATGAAGTCATAAAATTGTCCCCTGATTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAGTAGAAGCTAAAGATGAAGTCATAAAATTGTCCCCTGATTTCT  900

seq1  TCACATGAACCATGGCACACAAGTGTCTGTACTTATAAAAACAATTATAC  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCACATGAACCATGGCACACAAGTGTCTGTACTTAT-AAAACAATTATAC  949

seq1  ATATATAAACACATGCATATGAATTCACATATCCATGCTCCCAAAATGAG  1000
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATATATAAACACATGCATATGATTTCACATATCCATGCTCCCAAAATGAG  999

seq1  AGTACTTTGGCTAAAATCAAATGTCAATAT-CCTTTAAGTAAAGACTTAT  1049
      ||||||||||   ||||||||||||||||| |||||||||||||||||||
seq2  AGTACTTTGGGCTAAATCAAATGTCAATATCCCTTTAAGTAAAGACTTAT  1049

seq1  AAGAAGTTACCTTGAAAATGTATCTGCTTCAGAGATGAATACA-TTAAAC  1098
       |||   |||  || |||||||||||| ||||||||||||||| ||||||
seq2  -AGA--GTAC--TGGAAATGTATCTGC-TCAGAGATGAATACATTTAAAC  1093

seq1  AG-TATATAG-AAGATGCACTAAGTTTAAGAAAATT--CATTATG--ACT  1142
      || ||||||| ||||||||||||||| | |||||||  |||||||   ||
seq2  AGTTATATAGAAAGATGCACTAAGTTAAGGAAAATTTCCATTATGGACCT  1143

seq1  AGCAA  1147
      |||||
seq2  AGCAA  1148


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