BAC Information

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BAC

Clone NameB6Ng01-262C21
ChromosomeX (Build37)
Map Location 81,844,519 - 81,845,674
singlet/doubletsinglet
Overlap geneDmd
Upstream geneLOC100042306
Downstream geneLOC100042296, LOC669833, 1600014K23Rik, Map3k7ip3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262C21.bB6Ng01-262C21.g
ACCGA066665GA066666
length1,1531,186
definitionB6Ng01-262C21.b B6Ng01-262C21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgctctatttctatggtcaccagtttaaatcaagctccccag
gaattttcactttccacccctagttcagatttgcatataaatagctcatt
actcctaagacttttgcttcttagtttaaaatcaattttatttttctcca
aattaaaattgcctaactgacttttccagtaattcacatcatcttctggg
atttagctttccctgtcgtcctgctcctcattatacgggcactattattt
ttcctttgcctttgttttctggcacatttaaaaataagagcccaacaata
attaacatatcacagcacaactcaaagtaaatcgtcatggagaaagaatc
ctggttctgtaaatatttaccaactcctgactatataatctgcttaagga
tgagggtttgtgtcaaaaaagaaggaaatccagtccttatggactttaga
gtaatgtgtgagactaatacaaaataattagctatatgattcatgtttta
ttaatatttggaataagtattaatgtaagagaaatgcactagtgttcaaa
gaattgatatgaagatgggacctattgtgaacaggtgatgtctctcagag
atgttaatctttttaatgggtttgcacaccaagtcttgattggtatcttc
tgatctattcattgggagctgagaagatgacagaggctcattatctcatt
aatagatcaatcactcattggttcaaaatttgttggcataaatggaaaaa
gcttcaaagctttggcttaagtgaagaaagtatctcactctatacatgat
ctcaagaggtgttttgttcctgatcttttctactgtttgttctctgcttc
ctgagccactggaagttggtttttagttaattgcttagttctatcattgt
ctttgtgaatggaggcaaatcatttcacttcaccaatcctaggcttcttt
tcattaaacaggacagcaagccaggcttttgagttgaattggcatatgtc
attaatgggatggcatggtttcatcaaggtcactgcccttcattacagct
taaagtagtttgagaaaataaagtagttcttacttttatgaatgtttccc
aagaaagtatgaaattctctgttatcatggtgtacttttctctgatcatc
agc

gaattctcacctgaggaataccgaatggcagaaaagcacctgaaaaaatg
ttcaacatccttaataatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtcttgcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccgactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacagaatg
gaatactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacattttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagacga
aaggatggaccatgtagagactgtcatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggagaagctagagaaagtacccaagagctaaagggatctgcaccctata
gtgaacacatatgactaccagtacccgagctctgactctagctgcatatt
gtaatcaaagatgctagtcgcatcactggtaaaggagtgatcaattgaca
tgcaacctgttatattgcctcagtacagagtatcgtcaggtctaagagga
agtgaacttggcaatagattggttgagagaagaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_81844519_81845674
seq2: B6Ng01-262C21.b_49_1201 (reverse)

seq1  GCTGATGATACCAGAAAAGTACA-CATGATAACAGAGAATATCAATACTT  49
      |||||||||   ||||||||||| |||||||||||||||| || ||||||
seq2  GCTGATGATCAGAGAAAAGTACACCATGATAACAGAGAATTTC-ATACTT  49

seq1  CTTGGGGAAACATTCATAAAAGGTAAGAACTACTTTA-TTTCTCAAACTA  98
        | ||||||||||||||||| ||||||||||||||| ||||||||||||
seq2  TCTTGGGAAACATTCATAAAA-GTAAGAACTACTTTATTTTCTCAAACTA  98

seq1  CTTTTAGCTGTAATGAAGGGGCAGTGACCTTGGATG-AACCATGCCATCC  147
      |||| |||||||||||| ||||||||||||| |||| |||||||||||||
seq2  CTTTAAGCTGTAATGAA-GGGCAGTGACCTT-GATGAAACCATGCCATCC  146

seq1  CATTAATGACATATGCCAATTCAACTCAAAAGCCTGGCTTGCTGTCCTGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CATTAATGACATATGCCAATTCAACTCAAAAGCCTGGCTTGCTGTCCTG-  195

seq1  TTTAATGAAAAGAAGCCTAGGATTTGGTGAAGTGAAATGATTTGCCTCCA  247
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTAATGAAAAGAAGCCTAGGA-TTGGTGAAGTGAAATGATTTGCCTCCA  244

seq1  TTCACAAAGACAATGATAGAACTAAGCAATTAACTAAAAACCAACTTCCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAAGACAATGATAGAACTAAGCAATTAACTAAAAACCAACTTCCA  294

seq1  GTGGCTCAGGAAGCAGAGAACAAACAGTAGAAAAGATCAGGAACAAAACA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCAGGAAGCAGAGAACAAACAGTAGAAAAGATCAGGAACAAAACA  344

seq1  CCTCTTGAGATCATGTATAGAGTGAGATACTTTCTTCACTTAAGCCAAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGAGATCATGTATAGAGTGAGATACTTTCTTCACTTAAGCCAAAG  394

seq1  CTTTGAAGCTTTTTCCATTTATGCCAACAAATTTTGAACCAATGAGTGAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGCTTTTTCCATTTATGCCAACAAATTTTGAACCAATGAGTGAT  444

seq1  TGATCTATTAATGAGATAATGAGCCTCTGTCATCTTCTCAGCTCCCAATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTATTAATGAGATAATGAGCCTCTGTCATCTTCTCAGCTCCCAATG  494

seq1  AATAGATCAGAAGATACCAATCAAGACTTGGTGTGCAAACCCATTAAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATCAGAAGATACCAATCAAGACTTGGTGTGCAAACCCATTAAAAA  544

seq1  GATTAACATCTCTGAGAGACATCACCTGTTCACAATAGGTCCCATCTTCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAACATCTCTGAGAGACATCACCTGTTCACAATAGGTCCCATCTTCA  594

seq1  TATCAATTCTTTGAACACTAGTGCATTTCTCTTACATTAATACTTATTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATTCTTTGAACACTAGTGCATTTCTCTTACATTAATACTTATTCC  644

seq1  AAATATTAATAAAACATGAATCATATAGCTAATTATTTTGTATTAGTCTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAATAAAACATGAATCATATAGCTAATTATTTTGTATTAGTCTC  694

seq1  ACACATTACTCTAAAGTCCATAAGGACTGGATTTCCTTCTTTTTTGACAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTACTCTAAAGTCCATAAGGACTGGATTTCCTTCTTTTTTGACAC  744

seq1  AAACCCTCATCCTTAAGCAGATTATATAGTCAGGAGTTGGTAAATATTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTCATCCTTAAGCAGATTATATAGTCAGGAGTTGGTAAATATTTA  794

seq1  CAGAACCAGGATTCTTTCTCCATGACGATTTACTTTGAGTTGTGCTGTGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCAGGATTCTTTCTCCATGACGATTTACTTTGAGTTGTGCTGTGA  844

seq1  TATGTTAATTATTGTTGGGCTCTTATTTTTAAATGTGCCAGAAAACAAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAATTATTGTTGGGCTCTTATTTTTAAATGTGCCAGAAAACAAAG  894

seq1  GCAAAGGAAAAATAATAGTGCCCGTATAATGAGGAGCAGGACGACAGGGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGAAAAATAATAGTGCCCGTATAATGAGGAGCAGGACGACAGGGA  944

seq1  AAGCTAAATCCCAGAAGATGATGTGAATTACTGGAAAAGTCAGTTAGGCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAAATCCCAGAAGATGATGTGAATTACTGGAAAAGTCAGTTAGGCA  994

seq1  ATTTTAATTTGGAGAAAAATAAAATTGATTTTAAACTAAGAAGCAAAAGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTTGGAGAAAAATAAAATTGATTTTAAACTAAGAAGCAAAAGT  1044

seq1  CTTAGGAGTAATGAGCTATTTATATGCAAATCTGAACTAGGGGTGGAAAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAGTAATGAGCTATTTATATGCAAATCTGAACTAGGGGTGGAAAG  1094

seq1  TGAAAATTCCTGGGGAGCTTGATTTAAACTGGTGACCATAGAAATAGAGC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTCCTGGGGAGCTTGATTTAAACTGGTGACCATAGAAATAGAGC  1144

seq1  ACTGAATTC  1156
      |||||||||
seq2  ACTGAATTC  1153


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