BAC Information

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BAC

Clone NameB6Ng01-262K11
ChromosomeX (Build37)
Map Location 81,710,648 - 81,851,680
singlet/doubletdoublet
Overlap geneDmd
Upstream geneTsga8, LOC100042306
Downstream geneLOC100042296, LOC669833, 1600014K23Rik, Map3k7ip3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262K11.bB6Ng01-262K11.g
ACCGA067011GA067012
length3961,102
definitionB6Ng01-262K11.b B6Ng01-262K11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,851,279 - 81,851,680)(81,710,648 - 81,711,769)
sequence
ttacatttctagcttcagtggcaatgcatacagtgaaaacaagagaaaat
ctgttttatgggttaaaaaaaatattttcaattagacattcagaggccta
gagagtatatgggtgcaaatgatggtaggagacaaaaatatagttctgga
ccttagaagaaatatatgatgactataaagactaaggtgtcttgatagta
gttgaaaccaataaaaatgaaattgaaatatgtaggtacagagaatgaag
aagagaggggctggtgtatagctcagttttatagtatgtgcatagaatgt
ggatgttcttcagttcaatgtgcagagcagctgcatttaagagagtgtaa
agtaaacggaggaggaggaagaggaggaggagaaggaggaggagga

gaattcagatccctggcacttagagtagaacccagacttctactgagatg
ggagggagagagaaaaatttattcaggtatatgactcctgatgctataaa
tatattccattatatcatcctatactgatacatatactgaaagtacagat
gaactctgtgttttgtagcagttaacattggaaaggaaaaatgattgagg
attgtgaggagggcaaaagttggaggagaggaaatgggaagtgttgatat
tgtccatgtttttgagtctatctaatgatctgcagtaaatttctacagtt
atatattaattttctattttcaaccctacctatgcatagttttcaaagac
ccaactccttagctgggattacttttatgattctagacttaatatacatt
aggggaagagtgtgcaagggtataagcaatactactataatcacaagata
agagttctgcttcatattagggttctttctttacagaaatgtctgcttgg
cagtgagatgactttcaatcatcttcattacttccatgttaatttttcat
ttacaacttttgtatcatatttcaattctgacatcttcaacacttcattc
tgccttactctactatatgtggaagtgttgggtattcctgggaggttaga
aggagaagaagcaccccacatttcttccatcttcttaatgaaaagaccac
ctaaaaagtatgaactactgtaatgcagccacttgaatgagtgctttgta
atctcagagtataaatgtgtagatgtatattttctttttaaaattattat
ttttctttttttaacattccagattttattccccttcctgtccaccgttc
aactgttccacatctcatacctattccacaccccccttgtctccatgagg
atgtcctcaagccctaccccaccagacctctaactccatagggcctcagt
ctcttcaggttaggtgcatcttctctgactgaacagtccagcagtctctg
ctatatgtgtgtttgacgaatatcaactggggtatgctgctgttggtgtc
cagtgttgaaagatctcaggtcaagtactgagactttagttctctacagg
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_81851279_81851680
seq2: B6Ng01-262K11.b_50_451 (reverse)

seq1  TCCTCCTCCTCCTTCTCCTCCTCCTCTTCCTCCTCCTCCGTTTACTTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCCTTCTCCTCCTCCTCTTCCTCCTCCTCCGTTTACTTTAC  50

seq1  ACTCTCTTAAATGCAGCTGCTCTGCACATTGAACTGAAGAACATCCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTTAAATGCAGCTGCTCTGCACATTGAACTGAAGAACATCCACAT  100

seq1  TCTATGCACATACTATAAAACTGAGCTATACACCAGCCCCTCTCTTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCACATACTATAAAACTGAGCTATACACCAGCCCCTCTCTTCTTC  150

seq1  ATTCTCTGTACCTACATATTTCAATTTCATTTTTATTGGTTTCAACTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGTACCTACATATTTCAATTTCATTTTTATTGGTTTCAACTACT  200

seq1  ATCAAGACACCTTAGTCTTTATAGTCATCATATATTTCTTCTAAGGTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGACACCTTAGTCTTTATAGTCATCATATATTTCTTCTAAGGTCCA  250

seq1  GAACTATATTTTTGTCTCCTACCATCATTTGCACCCATATACTCTCTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATATTTTTGTCTCCTACCATCATTTGCACCCATATACTCTCTAGG  300

seq1  CCTCTGAATGTCTAATTGAAAATATTTTTTTTAACCCATAAAACAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAATGTCTAATTGAAAATATTTTTTTTAACCCATAAAACAGATTT  350

seq1  TCTCTTGTTTTCACTGTATGCATTGCCACTGAAGCTAGAAATGTAAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTTTTCACTGTATGCATTGCCACTGAAGCTAGAAATGTAAGAAT  400

seq1  TC  402
      ||
seq2  TC  402


seq1: chrX_81710648_81711769
seq2: B6Ng01-262K11.g_67_1168

seq1  GAATTCAGATCCCTGGCACTTAGAGTAGAACCCAGACTTCTACTGAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCCCTGGCACTTAGAGTAGAACCCAGACTTCTACTGAGATG  50

seq1  GGAGGGAGAGAGAAAAATTTATTCAGGTATATGACTCCTGATGCTATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGAGAGAAAAATTTATTCAGGTATATGACTCCTGATGCTATAAA  100

seq1  TATATTCCATTATATCATCCTATACTGATACATATACTGAAAGTACAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCCATTATATCATCCTATACTGATACATATACTGAAAGTACAGAT  150

seq1  GAACTCTGTGTTTTGTAGCAGTTAACATTGGAAAGGAAAAATGATTGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTGTGTTTTGTAGCAGTTAACATTGGAAAGGAAAAATGATTGAGG  200

seq1  ATTGTGAGGAGGGCAAAAGTTGGAGGAGAGGAAATGGGAAGTGTTGATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAGGAGGGCAAAAGTTGGAGGAGAGGAAATGGGAAGTGTTGATAT  250

seq1  TGTCCATGTTTTTGAGTCTATCTAATGATCTGCAGTAAATTTCTACAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATGTTTTTGAGTCTATCTAATGATCTGCAGTAAATTTCTACAGTT  300

seq1  ATATATTAATTTTCTATTTTCAACCCTACCTATGCATAGTTTTCAAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAATTTTCTATTTTCAACCCTACCTATGCATAGTTTTCAAAGAC  350

seq1  CCAACTCCTTAGCTGGGATTACTTTTATGATTCTAGACTTAATATACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCCTTAGCTGGGATTACTTTTATGATTCTAGACTTAATATACATT  400

seq1  AGGGGAAGAGTGTGCAAGGGTATAAGCAATACTACTATAATCACAAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGAGTGTGCAAGGGTATAAGCAATACTACTATAATCACAAGATA  450

seq1  AGAGTTCTGCTTCATATTAGGGTTCTTTCTTTACAGAAATGTCTGCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCTGCTTCATATTAGGGTTCTTTCTTTACAGAAATGTCTGCTTGG  500

seq1  CAGTGAGATGACTTTCAATCATCTTCATTACTTCCATGTTAATTTTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGATGACTTTCAATCATCTTCATTACTTCCATGTTAATTTTTCAT  550

seq1  TTACAACTTTTGTATCATATTTCAATTCTGACATCTTCAACACTTCATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACTTTTGTATCATATTTCAATTCTGACATCTTCAACACTTCATTC  600

seq1  TGCCTTACTCTACTATATGTGGAAGTGTTGGGTATTCCTGGGAGGTTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTACTCTACTATATGTGGAAGTGTTGGGTATTCCTGGGAGGTTAGA  650

seq1  AGGAGAAGAAGCACCCCACATTTCTTCCATCTTCTTAATGAAAAGACCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAGAAGCACCCCACATTTCTTCCATCTTCTTAATGAAAAGACCAC  700

seq1  CTAAAAAGTATGAACTACTGTAATGCAGCCACTTGAATGAGTGCTTTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAGTATGAACTACTGTAATGCAGCCACTTGAATGAGTGCTTTGTA  750

seq1  ATCTCAGAGTATAAATGTGTAGATGTATATTTTCTTTTTAAAATTATTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGAGTATAAATGTGTAGATGTATATTTTCTTTTTAAAATTATTAT  800

seq1  TTTTCTTTTTTTAACATTCCAGATTTTATTCCCCTTCCTGTCCACCGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTTTAACATTCCAGATTTTATTCCCCTTCCTGTCCACCGTTC  850

seq1  AACTGTTCCACATCTCATACCTATTCCACACCCCCCTTGTCTCCATGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTCCACATCTCATACCTATTCCACACCCCCCTTGTCTCCATGAGG  900

seq1  ATGTCCTCAAGCCCTACCCCACCAGACCTCTAAACTCCATAGGGCCTCCA  950
      ||||||||||||||||||||||||||||||| ||||||||||||||| ||
seq2  ATGTCCTCAAGCCCTACCCCACCAGACCTCT-AACTCCATAGGGCCT-CA  948

seq1  GTCTCTTCAGGGTTAGGTGCATCTTCTCTGACTGAACAAGTCCCAGCAGT  1000
      ||||||||| ||||||||||||||||||||||||||| ||| ||||||||
seq2  GTCTCTTCA-GGTTAGGTGCATCTTCTCTGACTGAAC-AGT-CCAGCAGT  995

seq1  CCTCTGCTATATGTGTGTTTGGAACCGAATATCAACTGGGGTATGCTGCC  1050
       ||||||||||||||||||||    ||||||||||||||||||||||| |
seq2  -CTCTGCTATATGTGTGTTTG---ACGAATATCAACTGGGGTATGCTG-C  1040

seq1  TGTTTGGTGGTCCAGTGTTTGAGAGATCTCAGGGGTCCAGGTTAATTGAG  1100
      || ||||| |||||||| |||| ||||||||  |||| ||    | ||||
seq2  TG-TTGGT-GTCCAGTG-TTGAAAGATCTCA--GGTCAAG---TACTGAG  1082

seq1  ACTTTTGGTCCTCCTACAGGTT  1122
      ||||| | ||   |||||||||
seq2  ACTTTAGTTC--TCTACAGGTT  1102


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