BAC Information

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BAC

Clone NameB6Ng01-265L15
ChromosomeX (Build37)
Map Location 10,455,834 - 10,456,967
singlet/doubletsinglet
Overlap genenone
Upstream geneSytl5, LOC436194, Srpx, Rpgr, Otc, 4933416E14Rik, Tspan7, EG546265, LOC633354, LOC633361, LOC100042912, Mid1ip1, LOC668982
Downstream genePpia-psx_105.1, LOC100042922, LOC100042927, LOC100042929, LOC100042931, OTTMUSG00000016790, LOC100042939, LOC100042943, LOC100042944, LOC100042946, EG236663, 8430439B09Rik, LOC669520, Rpl23a-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265L15.bB6Ng01-265L15.g
ACCGA069302GA069303
length1,1961,108
definitionB6Ng01-265L15.b B6Ng01-265L15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggagactccagatgaggtttgagatatttttctgtttctga
aaaaaaaaatgtcattgagatttcactgggactgcactgaatgtgtccgt
cgtgttggaaagtatccacatattaatgaaattgttttgcaatccacaaa
tgtgggatctacttccattgactttggtcttcttggtttcagcgttgttt
ttagttcttgtgtaatttttcacctccctggttcattcctgaatattatt
attttggcagtgttacagatgaggttatatttataagtcctctttcagtt
tgctcactgttagtatctagagcatacagccgatgtttttgttcattgaa
tatgtttactgctattttgctgcattcatataatggtcaaacagagagat
tttgtgttagaatgtttaatgtttatacagataagactataatatctgca
aacagacaatttttctcttctctttccaagttctggtaccaccatcctgt
ttgtttaacacaagcactgatgcctggagatttccacttaagaaaggact
attgctaagtcctagaagttttggtatgatgtattttcattttatacctc
tctatattgtctagttttctttatgatttctttctagatccactgggtat
tgaagactattgtttaattcccataaatttgtgaatatttcactctgaat
tctgataccaatgctttaagttgattccattctagtcaaagaatctacct
ggtgcggtgtgccttttaaaattcagatttaatttgttgcctgatacatg
gtctatcctagaaaacacctctcctagtttgtcttttcttgctataacac
acaccattaacaaagacagcatgatgaggaaagagtttatttaagctttt
gtgtcccagatcagtctatcgttgaaggaaataaaggctgaaacctggga
gacaagacgtgaagcagagtcatggtggagccttgcttgctagcttgctc
ctgtggtctgttcagcctgctttctatataaccccaaccccctgcccagg
ggtgacactgccaacagtggctgaacacttccagtatctatcatattcag
agaatgtcttcaatgaactgtctacagtcaatcggaagagcattcctaac
cgtacctaactttccaaataacctttggactggtggttttgtagag
gaattcacaccaatcacctggaattttctccttatagccttttagatttg
gacttttttcttctgatgtgataaaagctttcatttaaatttatttaatt
agccccactctctctactcaccatgaagtcagaggcctttccattccaaa
ggagctgtaaagtctttggaaattactcccaatccagggctgtgaaaaat
ataagtatctgtgggttaaaagtttctaaatcctggcagtccaatgccca
ggacacctattttcttccggctgttgcctgagaagaaggagagtgtttct
cactggactgcttgcctccgtgagcatgtgtactcccaagtttcacacat
ccagagaatggccctctcctgactctcttgccaattgcagggcaactctt
agctaaagggaacacttagcctgtgccaagtggaagtggatcacgtgaag
ggcagggagctggatgagggtgagaggctctttggctgcccagaataaat
atctcacaagaaactagcaaaggctttattccacattcattggtgtcccg
atgaaaaccctttggtgtgtataaatgacggtcaaattcaaattagaatt
tatgatgatggccaaagaacagggatatgactctcattttctttgtttac
aaattaactccacagtcaggcattgggcaccatgaaagaaggaacacact
atcaatctgacagagaacccataataagaatgtatgtattagaaggattg
ggagtataagaactctttacttgggcaactagttttcaagattggatatt
ccacagaagtagaccttgtgttaaggatgtgaatgcaagtagtatgtttg
agtgttgatttccaaaatcttgatacagctgtacttgggagtatggctca
gtgacagagtgcctccgtagcacatataggccctatgtggcatccataga
atcaaatgcatcattagagatggatagtgacataggaagaaaagaagtca
ttcatagactctgatatggctaaatagcagacactgtgctggggactcag
tagtagtgtgaatcttcgatcccgtgagataggagtagctatctaaccat
tatccatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_10455834_10456967
seq2: B6Ng01-265L15.g_68_1175

seq1  GAATTCACACCAATCACCTGGAATTTTCTCCTTATAGCCTTTTAGATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACCAATCACCTGGAATTTTCTCCTTATAGCCTTTTAGATTTG  50

seq1  GACTTTTTTCTTCTGATGTGATAAAAGCTTTCATTTAAATTTATTTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTTTCTTCTGATGTGATAAAAGCTTTCATTTAAATTTATTTAATT  100

seq1  AGCCCCACTCTCTCTACTCACCATGAAGTCAGAGGCCTTTCCATTCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCACTCTCTCTACTCACCATGAAGTCAGAGGCCTTTCCATTCCAAA  150

seq1  GGAGCTGTAAAGTCTTTGGAAATTACTCCCAATCCAGGGCTGTGAAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGTAAAGTCTTTGGAAATTACTCCCAATCCAGGGCTGTGAAAAAT  200

seq1  ATAAGTATCTGTGGGTTAAAAGTTTCTAAATCCTGGCAGTCCAATGCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTATCTGTGGGTTAAAAGTTTCTAAATCCTGGCAGTCCAATGCCCA  250

seq1  GGACACCTATTTTCTTCCGGCTGTTGCCTGAGAAGAAGGAGAGTGTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCTATTTTCTTCCGGCTGTTGCCTGAGAAGAAGGAGAGTGTTTCT  300

seq1  CACTGGACTGCTTGCCTCCGTGAGCATGTGTACTCCCAAGTTTCACACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGACTGCTTGCCTCCGTGAGCATGTGTACTCCCAAGTTTCACACAT  350

seq1  CCAGAGAATGGCCCTCTCCTGACTCTCTTGCCAATTGCAGGGCAACTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAATGGCCCTCTCCTGACTCTCTTGCCAATTGCAGGGCAACTCTT  400

seq1  AGCTAAAGGGAACACTTAGCCTGTGCCAAGTGGAAGTGGATCACGTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAGGGAACACTTAGCCTGTGCCAAGTGGAAGTGGATCACGTGAAG  450

seq1  GGCAGGGAGCTGGATGAGGGTGAGAGGCTCTTTGGCTGCCCAGAATAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGAGCTGGATGAGGGTGAGAGGCTCTTTGGCTGCCCAGAATAAAT  500

seq1  ATCTCACAAGAAACTAGCAAAGGCTTTATTCCACATTCATTGGTGTCCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACAAGAAACTAGCAAAGGCTTTATTCCACATTCATTGGTGTCCCG  550

seq1  ATGAAAACCCTTTGGTGTGTATAAATGACGGTCAAATTCAAATTAGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACCCTTTGGTGTGTATAAATGACGGTCAAATTCAAATTAGAATT  600

seq1  TATGATGATGGCCAAAGAACAGGGATATGACTCTCATTTTCTTTGTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGATGGCCAAAGAACAGGGATATGACTCTCATTTTCTTTGTTTAC  650

seq1  AAATTAACTCCACAGTCAGGCATTGGGCACCATGAAAGAAGGAACACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAACTCCACAGTCAGGCATTGGGCACCATGAAAGAAGGAACACACT  700

seq1  ATCAATCTGACAGAGAACCCATAATAAGAATGTATGTATTAGAAGGATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCTGACAGAGAACCCATAATAAGAATGTATGTATTAGAAGGATTG  750

seq1  GGAGTATAAGAACTCTTTACTTGGGCAACTAGTTTTCAAGATTGGATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTATAAGAACTCTTTACTTGGGCAACTAGTTTTCAAGATTGGATATT  800

seq1  CCACAGAAGTAGACCTTGTGTTAAGGATGTGAATGCAAGTAGTATGTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAAGTAGACCTTGTGTTAAGGATGTGAATGCAAGTAGTATGTTTG  850

seq1  AGTGTTGATTCCAAAAATCTTGATACAGCTGTACTT-GGAGTATGGCTCA  899
      |||||||||| | ||||||||||||||||||||||| |||||||||||||
seq2  AGTGTTGATTTCCAAAATCTTGATACAGCTGTACTTGGGAGTATGGCTCA  900

seq1  GTGACAGAGTGCCTCCGTAGCACATATAGGCCCTATGTGGCATCCATAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGAGTGCCTCCGTAGCACATATAGGCCCTATGTGGCATCCATAGA  950

seq1  ATCAAATGCATCATTAGAGATTGGATAAGTGACATAGGGAAGAAAAGAAA  999
      |||||||||||||||||||| ||||| ||||||||| |||||||||| ||
seq2  ATCAAATGCATCATTAGAGA-TGGAT-AGTGACATA-GGAAGAAAAG-AA  996

seq1  GTCAATTCATAGACTCTGATATGGGCTAAAATAGCAAGACCACTGTGCTG  1049
      ||| |||||||||||||||||| |||| ||||||| ||| ||||||||||
seq2  GTC-ATTCATAGACTCTGATAT-GGCT-AAATAGC-AGA-CACTGTGCTG  1041

seq1  GGGACCTCAGGTAGGTAGTGTGGGAAATACTTTCAGATTCCCCGTGAGGG  1099
      |||| |||| ||| ||||||||   ||| |||   |||  ||||||||  
seq2  GGGA-CTCA-GTA-GTAGTGTG---AAT-CTT--CGAT--CCCGTGAG--  1078

seq1  ATAAAGAATGTAGGCTATCTAACCATTATCTCATT  1134
        | || | ||| ||||||||||||||||| ||||
seq2  --ATAGGA-GTA-GCTATCTAACCATTATC-CATT  1108