MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-266C16
Chromosome	X (Build37)
Map Location	136,251,530 - 136,409,052
singlet/doublet	doublet
Overlap gene	Tbc1d8b, Ripply1, Cldn2, Morc4
Upstream gene	Il1rapl2, Nrk, Serpina7, 4930513O06Rik, 4933428M09Rik, Mum1l1, LOC675062, Trap1a, C330013F16Rik, EG666359, D330045A20Rik, Rnf128, LOC622432
Downstream gene	Rbm41, Gm719, E230019M04Rik, LOC622213, LOC100041446, EG245643, LOC666424, Prps1, Tsc22d3, Mid2, LOC619612, Tex13, LOC632685
Link	Open Mouse BAC browser

Click to get alignment info.

name	Il1rapl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60367 MGI:1913106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nrk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27206 MGI:1351326
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Serpina7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331535 MGI:3041197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930513O06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75125 MGI:1922375
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	4933428M09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71248 MGI:1918498
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Mum1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245631 MGI:2445062
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675062 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675062
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Trap1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22037 MGI:98818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C330013F16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78526 MGI:1925776
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG666359 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666359 MGI:3646568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	D330045A20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102871 MGI:2147848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf128 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66889 MGI:1914139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622432 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 17 Proteins pseudo : _no_value

name	Tbc1d8b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245638 MGI:1918101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ripply1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622473 MGI:3614797
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cldn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12738 MGI:1276110
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Morc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75746 MGI:1922996
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm41 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237073 MGI:2444923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm719 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:279706 MGI:2685565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 1 Protein

name	E230019M04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331537 MGI:3607720
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622213 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 18 Proteins pseudo : _no_value

name	LOC100041446 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG245643 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245643 MGI:3646547
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666424 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666424
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Prps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19139 MGI:97775
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tsc22d3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14605 MGI:1196284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mid2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23947 MGI:1344333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC619612 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619612
definition	note : eukaryotic translation initiation factor 2C, 2 pseudogene pseudo : _no_value

name	Tex13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83555 MGI:1890544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC632685 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:632685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 192 ESTs, 2 Proteins pseudo : _no_value

name	Il1rapl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507615 GeneID:60367 MGI:1913106
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 1 receptor accessory protein-like 2 transcript_id : NM_030688.1

name	Nrk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305326 GeneID:27206 MGI:1351326
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Nik related kinase transcript_id : NM_013724.1

name	Serpina7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849769 GeneID:331535 MGI:3041197
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 transcript_id : NM_177920.4

name	4930513O06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408277 GeneID:75125 MGI:1922375
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930513O06 gene transcript_id : XM_136059.4

name	4933428M09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272283 GeneID:71248 MGI:1918498
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933428M09 gene transcript_id : XM_001475652.1

name	Mum1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342136 GeneID:245631 MGI:2445062
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanoma associated antigen (mutated) 1-like 1 transcript_id : NM_175541.2

name	Trap1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755870 GeneID:22037 MGI:98818
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor rejection antigen P1A transcript_id : NM_011635.1

name	C330013F16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272285 GeneID:78526 MGI:1925776
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA C330013F16 gene transcript_id : XM_001475717.1

name	D330045A20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351317 GeneID:102871 MGI:2147848
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D330045A20 gene transcript_id : NM_175326.3

name	Rnf128 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378619 GeneID:66889 MGI:1914139
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 128 transcript_id : NM_023270.4

name	Tbc1d8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125630635 GeneID:245638 MGI:1918101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 8B transcript_id : NM_001081499.1

name	Ripply1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83776578 GeneID:622473 MGI:3614797
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ripply1 transcript_id : NM_001037915.1

name	Cldn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47270694 GeneID:12738 MGI:1276110
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 2 transcript_id : NM_016675.3

name	Morc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383330 GeneID:75746 MGI:1922996
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microrchidia 4 transcript_id : NM_029413.2

name	Rbm41 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956383 GeneID:237073 MGI:2444923
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 41 transcript_id : NM_153586.1

name	Gm719 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408282 GeneID:279706 MGI:2685565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 1 Protein product : gene model 719, (NCBI) transcript_id : XM_205358.4

name	E230019M04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368472 GeneID:331537 MGI:3607720
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E230019M04 gene transcript_id : NM_177921.3

name	LOC100041446 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272288 GeneID:100041446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041446 transcript_id : XM_001476409.1

name	EG245643 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802623 GeneID:245643 MGI:3646547
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG245643 transcript_id : NM_177750.3

name	Prps1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368021 GeneID:19139 MGI:97775
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoribosyl pyrophosphate synthetase 1 transcript_id : NM_021463.3

name	Tsc22d3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116517337 GeneID:14605 MGI:1196284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TSC22 domain family 3 transcript_id : NM_001077364.1

name	Tsc22d3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116517341 GeneID:14605 MGI:1196284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TSC22 domain family 3 transcript_id : NM_010286.3

name	Mid2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134023660 GeneID:23947 MGI:1344333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : midline 2 transcript_id : NM_011845.2

name	Tex13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475713 GeneID:83555 MGI:1890544
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis expressed gene 13 transcript_id : NM_031381.2

name	Il1rapl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507616 CCDS:CCDS30429.1 GeneID:60367 MGI:1913106
definition	GO_function : GO:0004910 - interleukin-1, Type II, blocking receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : interleukin 1 receptor accessory protein-like 2 protein_id : NP_109613.1

name	Nrk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305327 GeneID:27206 MGI:1351326
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence ISS] [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007256 - activation of JNKK activity [Evidence IDA] codon_start : 1 exception : mismatches in translation product : Nik related kinase protein_id : NP_038752.1

name	Serpina7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559749 GeneID:331535 MGI:3041197
definition	GO_function : GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 note : alpha-1 antiproteinase, antitrypsin, 7; serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7; serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antipeptidase, antitrypsin), member 7 product : thyroxine-binding globulin protein_id : NP_808588.2

name	4930513O06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20985593 GeneID:75125 MGI:1922375
definition	codon_start : 1 product : hypothetical protein LOC75125 protein_id : XP_136059.1

name	4933428M09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272284 GeneID:71248 MGI:1918498
definition	codon_start : 1 product : hypothetical protein LOC71248 protein_id : XP_001475702.1

name	Mum1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789431 CCDS:CCDS30432.1 GeneID:245631 MGI:2445062
definition	codon_start : 1 product : melanoma associated antigen (mutated) 1-like 1 protein_id : NP_780750.1

name	Trap1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755871 CCDS:CCDS30433.1 GeneID:22037 MGI:98818
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : tumor rejection antigen P1A protein_id : NP_035765.1

name	C330013F16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272286 GeneID:78526 MGI:1925776
definition	codon_start : 1 product : hypothetical protein LOC78526 protein_id : XP_001475767.1

name	D330045A20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425010 CCDS:CCDS30434.1 GeneID:102871 MGI:2147848
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA] codon_start : 1 note : likely orthologue of H. sapiens Chromosome X open reading frame 57 (CXorf57) product : hypothetical protein LOC102871 protein_id : NP_780535.1

name	Rnf128 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560218 CCDS:CCDS30435.1 GeneID:66889 MGI:1914139
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005770 - late endosome [Evidence IDA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IDA] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0042036 - negative regulation of cytokine biosynthesis [Evidence IDA] codon_start : 1 exception : mismatches in translation product : ring finger protein 128 protein_id : NP_075759.2

name	Tbc1d8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125630636 GeneID:245638 MGI:1918101
definition	codon_start : 1 product : TBC1 domain family, member 8B protein_id : NP_001074968.1

name	Ripply1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776579 CCDS:CCDS30436.1 GeneID:622473 MGI:3614797
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : Down syndrome critical region homolog 6-like product : Ripply1 protein protein_id : NP_001033004.1

name	Cldn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710004 CCDS:CCDS30437.1 GeneID:12738 MGI:1276110
definition	GO_component : GO:0016021 - integral to membrane [Evidence NAS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence IEA] [Evidence IDA] GO_function : GO:0042802 - identical protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA] codon_start : 1 product : claudin 2 protein_id : NP_057884.1

name	Morc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794186 GeneID:75746 MGI:1922996
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : zinc finger, CW-type with coiled-coil domain 2 product : microrchidia 4 protein_id : NP_083689.1

name	Rbm41 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956384 GeneID:237073 MGI:2444923
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : RNA binding motif protein 41 protein_id : NP_705814.1

name	Gm719 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38086760 GeneID:279706 MGI:2685565
definition	codon_start : 1 product : hypothetical protein LOC279706 protein_id : XP_205358.2

name	E230019M04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244566 CCDS:CCDS30438.1 GeneID:331537 MGI:3607720
definition	codon_start : 1 product : hypothetical protein LOC331537 protein_id : NP_808589.1

name	LOC100041446 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272289 GeneID:100041446
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476459.1

name	EG245643 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244238 GeneID:245643 MGI:3646547
definition	codon_start : 1 product : hypothetical protein LOC245643 protein_id : NP_808418.1

name	Prps1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946854 CCDS:CCDS30439.1 GeneID:19139 MGI:97775
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : phosphoribosyl pyrophosphate synthetase 1 protein_id : NP_067438.1

name	Tsc22d3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116517338 GeneID:14605 MGI:1196284
definition	GO_function : GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; glucocorticoid-induced leucine zipper; delta sleep inducing peptide, immunoreactor; TSC22-related inducible leucine zipper 3 product : glucocorticoid-induced leucine zipper isoform 1 protein_id : NP_001070832.1

name	Tsc22d3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116517342 CCDS:CCDS30440.1 GeneID:14605 MGI:1196284
definition	GO_function : GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; glucocorticoid-induced leucine zipper; delta sleep inducing peptide, immunoreactor; TSC22-related inducible leucine zipper 3 product : glucocorticoid-induced leucine zipper isoform 2 protein_id : NP_034416.3

name	Mid2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754694 GeneID:23947 MGI:1344333
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : midline 2 protein_id : NP_035975.1

name	Tex13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13878205 GeneID:83555 MGI:1890544
definition	codon_start : 1 product : testis expressed gene 13 protein_id : NP_113558.1

name	LOC675062 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675062
definition	number : 2 pseudo : _no_value

name	LOC675062 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675062
definition	number : 1 pseudo : _no_value

name	LOC666424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666424
definition	number : 2 pseudo : _no_value

name	LOC666424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666424
definition	number : 1 pseudo : _no_value

name	EG666359 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94408280 GeneID:666359 MGI:3646568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : predicted gene, EG666359 pseudo : _no_value transcript_id : XR_001862.1

name	LOC622432 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272287 GeneID:622432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 17 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase pseudo : _no_value transcript_id : XR_032430.1

name	LOC622213 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272290 GeneID:622213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 18 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_032508.1

name	LOC632685 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272291 GeneID:632685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 192 ESTs, 2 Proteins product : similar to ribosomal protein S7 pseudo : _no_value transcript_id : XR_032787.1

clone name	MSMg01-401F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322C11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-266C16.b	B6Ng01-266C16.g
ACC	GA069631	GA069632
length	1,154	1,124
definition	B6Ng01-266C16.b	B6Ng01-266C16.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(136,251,530 - 136,252,683)	(136,407,911 - 136,409,052)
sequence	ggaattctcagagattcctttattttaaattgcattacaaatgaatcata aaacactggttctccacctgtgggtcgtcactgctttcgagatagagtga ccctttcacaggagtcgcctaagaccattggaaaacacacatgcttacat tacaattcacaacagtagcaaaattacatttatgaagtagcagtgcaaat aactttatggttggggtcaccacaatatgaggaactcttaaagggtcaca gtgttaggaaggttgagaaccgctgctgtagaatgtcaagaaaaatagaa aagtagaactggatttatgccttaacatgtttaggtaggcaaatattttc tgcagataatcaaagcatatgtaattagttcttggctttgtttgaatttc taagtttttaattgtaagtattgagttgtggggacataatgatgttgcct aatgctagatttgcaaagaaaagctaatagagccaggacctgtaacccca gctccctgggaggctgggcagaaagattgcacagcctaagcaactaaggg agaccctgtttaaggattaaaaaaataaaaagggttagagatacggttca gtattactacttttgcctagcatgcttgtatccctggattcgatctatat ttaaaacaaagaagcaaagggggtttctttttggcaaggacatttctatt ttattagtagtatattttattatttgaggacttcacatacgcacacagta tattttgatatattcactcttctccttcccaacttaatgatttctctttt ttaaacatccttcctaatccaactggtgctgctcatatgtacatggatgt agagccgtcggctgtgcttggtaccacaccagtggccacactcttcaaga aagctgactctccctccctcagaaaccatcaactttccatagctcttcat ctagaggtggggtctcatgagcctctccccaatttcgtgctaagaatatt gattggcttgatgtaatcaaggccttgtgtagtacctacaggtgctgtga gttaccatggcactgatggtctgtcatgcctaggaaaacactgttcttct cctcttctaagaatgtctcctgagcgtggggagaagggatatgatattta tgtc	gaattcagcacaacattgatttacatagtatttacatttattaaacacta aaagtaatctagagatgatttaaagtatatgagggaataagggtaggtta tatgcaattgctacaccactttatacaagatgctagagcaattacaaaat tcggtgtctcagggattctgaaaccagtcccctgtggacagtgagctgat tggatatacgtatctatgtttaaatgcatacatatatacttgatttccca ataaagggtaccatgttacccagtgtttcatgtcttgtggagtctttgta tttgtgccaagtagagagagcaagggcaaattaaagaaattactccattc aaacttagttcaatgaaccaatgatatttgtgtgtgtgtggagcggggcc acaggtaaggggttacttacaggaacatgggcaattcaggcaactgcttt tccaaaaagcctgacctcagcatgagctactactcacaaaaagctgcatt accagcagaccctgggcaacttacacatttctctaccataaaagaattgc ttcttccccaccaattgtttcccatctttataaccccttacccagtttca tgagccttatggggaaagttaatttctcaaaaaaaaaaaaaaaagacata caaaaagccaatacattatttcaacatgctcattggggcttgatggtgca ggcctgtaactaactccagctacttggaatattgacaaggatgaatacat gtttaaccttcttgggctacaaagtaatttcaaggccagtccaggaacct caatgagaatctatcacaaaataaaggataaaaactgagctggagagaga gacatagtttggtgatggagggacaagacccaatcctagacacgtgtact caaaacgctcagtatggcagaacgaaaatcataatgtggcacacttcact ctagttaaaaatgacaaaatgagaaagaaacattgccggtgtggatgtag aagaaaaggagccttacgactgtgttgcggtgcaaatagtacatcatatg aaaaaaaaatgtatggagcttctcaacattaaacataggattacctagac agacacggattatcttagaatccc
quality values	Open. Hide. 15 8 58 22 31 62 62 62 31 31 45 62 62 27 22 62 62 62 62 62 47 62 54 62 62 44 56 62 62 62 62 59 51 51 43 28 46 59 44 38 43 56 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 33 54 62 54 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 42 49 62 62 59 62 62 59 62 62 59 59 62 62 62 62 62 59 62 62 62 59 62 62 59 62 62 62 62 59 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 43 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 62 62 52 62 62 62 62 62 39 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 49 42 33 47 46 54 58 58 58 51 49 54 45 58 46 42 54 49 58 58 58 58 58 42 42 54 58 58 58 38 44 58 54 54 54 54 58 58 54 58 52 58 54 54 58 58 58 54 52 52 54 58 45 58 54 54 45 47 58 58 58 58 54 58 54 58 42 41 52 58 54 54 58 58 58 54 58 51 50 49 48 58 58 58 58 58 34 32 43 42 23 51 52 51 45 52 52 53 53 58 42 36 58 58 51 34 34 49 58 46 58 58 47 47 47 54 51 43 58 54 58 58 50 58 50 53 39 58 58 58 50 50 51 37 42 49 46 58 41 35 46 53 58 48 51 47 50 51 58 58 51 46 35 33 50 34 41 53 41 32 40 50 49 33 54 58 39 31 32 50 50 50 58 50 50 46 26 41 49 39 11 16 11 5 12 8 54 36 49 40 58 50 58 58 49 43 31 41 52 50 38 26 54 54 50 54 39 40 45 52 34 32 41 49 32 53 53 49 39 53 53 49 39 51 37 44 50 52 35 32 27 32 49 38 27 53 45 42 41 28 54 51 44 41 37 51 54 54 54 54 22 15 54 47 41 25 52 45 44 33 23 19 54 28 51 18 33 38 40 32 33 30 32 40 40 27 37 39 34 32 33 37 31 35 42 36 34 53 34 31 32 24 32 31 30 29 32 32 29 32 30 51 19 42 38 30 35 31 25 32 24 38 31 24 29 30 13 21 25 21 8 30 30 28 11 33 28 22 24 30 37 33 31 9 9 18 17 31 28 31 42 31 29 31 28 42 17 16 42 48 43 31 31 36 22 43 17 42 31 36 28 46 21 32 20 42 15 17 25 20 13 48 46 30 13 36 29 30 17 7 39 31 39 46 29 28 34 25 31 38 21 32 31 31 41 21 27 13 31 31 21 26 16 28 15 39 27 42 48 48 35 18 26 32 32 31 32 36 38 11 30 21 33 28 29 27 42 36 17 10 11 8 47 16 26 24 19 18 26 11 7 11 8 33 18 19 21 17 19 23 32 25 10 16 19 9 8 14 33 23 12 14 7 5 10 21 27 10 33 11 9 25 13 26 19 23 9 7 12 13 7 4 9 15 14 31 32 22 11 25 25 13 16 28 22 11 7 10 24 9 22 17 21 10 15 14 8 26 18 7 6 10 28 20 4 3 3 19 11 9 6 12 8 19 19 20 14 12 11 13 11 6 5 19 47 24 7 6 5 6 6 8 13 21 14 9 22 6 9 13 8 9 7 10 11 10 12 16 21 9 16 23 8 7 6 6 5 13 9 6 6 6 3 2 2 4 17 7 8 12 10 7 12 7 2 19 10 2 5 6 14 8 10 5 10 12 14 2 5 6 6 7 7	Open. Hide. 62 59 38 59 62 59 36 62 62 45 51 24 18 39 17 27 28 28 23 29 48 42 56 62 59 62 59 62 59 62 59 62 54 62 62 59 62 62 59 62 62 59 62 62 62 59 59 62 54 62 62 62 62 54 62 59 43 51 48 28 28 25 38 34 54 54 62 59 59 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 59 59 62 62 59 62 62 62 62 59 59 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58 54 58 58 58 49 58 54 58 58 58 58 58 41 41 58 58 58 58 58 58 58 54 58 58 58 58 52 54 45 35 58 58 58 58 58 58 54 54 58 51 54 58 58 58 58 48 54 54 51 58 51 58 58 58 58 58 47 42 58 54 49 51 58 58 58 53 46 54 58 58 52 58 43 54 47 50 51 58 58 58 58 58 58 51 52 50 38 38 49 49 58 58 53 58 53 34 58 58 58 58 58 58 58 58 58 58 58 58 58 58 50 39 49 50 50 52 42 54 29 58 58 58 44 43 49 41 30 49 49 50 50 39 51 39 50 41 58 58 39 35 39 51 35 50 58 40 51 52 29 49 50 50 51 58 28 24 50 43 50 39 39 50 52 39 52 50 40 34 51 30 54 40 46 35 34 39 39 32 35 42 42 41 49 47 26 39 49 32 39 39 38 39 53 45 54 29 39 39 42 35 47 32 32 37 37 26 51 34 32 34 46 38 40 37 52 26 53 53 40 54 39 33 42 38 37 44 38 34 33 26 21 54 31 31 40 28 34 31 52 37 34 25 31 45 39 53 40 34 15 34 32 46 33 26 26 39 34 45 31 26 26 32 41 32 32 36 32 32 29 31 24 31 31 23 41 31 35 31 31 28 31 31 19 22 23 46 51 41 26 13 51 27 31 31 33 20 33 46 51 51 33 30 31 31 31 24 42 36 27 24 27 23 42 22 41 32 31 21 31 32 32 42 30 24 33 47 27 31 28 19 27 30 16 27 26 24 23 47 32 24 15 13 31 21 15 12 41 20 13 25 21 31 43 37 32 23 31 10 7 21 11 21 31 31 26 26 30 30 9 44 44 21 12 22 24 38 32 34 22 34 32 20 20 44 21 27 18 25 5 19 13 33 48 44 26 22 24 25 31 18 30 31 31 16 32 30 16 16 13 8 24 8 18 19 22 24 32 32 17 21 23 23 14 18 43 37 43 23 27 27 21 4 6 33 24 31 15 19 20 13 26 40 17 23 39 43 16 11 25 8 13 28 16 21 14 5 5 11 11 14 15 8 11 28 16 14 6 5 13 16 14 47 47 23 6 15 21 11 19 9 21 27 16 27 11 31 6 16 8 20 8 11 23 27 7 16 9 11 22 24 17 33 13 14 4 6 28 8 11 8 18 24 10 21 8 18 13 16 17 13 26 30 28 28 28 16 10 15 12 13 15 24 9 10 5 17 8 13 15 3 3 5 3 4 6 9 3 3 9 8 16 7 12 8 7 4 12 4 9 13 16 14 9 5 9 13 5 1 4 10 7 4 6 6 6 13 3 9 6 5 8 8 6 18 5 17 14 6 4 17 5

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_136251530_136252683
seq2: B6Ng01-266C16.b_48_1200

seq1  GAATTCTCAGAGATTCCTTTATTTTAAATTGCATTACAAATGAATCATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAGATTCCTTTATTTTAAATTGCATTACAAATGAATCATAA  50

seq1  AACACTGGTTCTCCACCTGTGGGTCGTCACTGCTTTCGAGATAGAGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGGTTCTCCACCTGTGGGTCGTCACTGCTTTCGAGATAGAGTGAC  100

seq1  CCTTTCACAGGAGTCGCCTAAGACCATTGGAAAACACACATGCTTACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCACAGGAGTCGCCTAAGACCATTGGAAAACACACATGCTTACATT  150

seq1  ACAATTCACAACAGTAGCAAAATTACATTTATGAAGTAGCAGTGCAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCACAACAGTAGCAAAATTACATTTATGAAGTAGCAGTGCAAATA  200

seq1  ACTTTATGGTTGGGGTCACCACAATATGAGGAACTCTTAAAGGGTCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATGGTTGGGGTCACCACAATATGAGGAACTCTTAAAGGGTCACAG  250

seq1  TGTTAGGAAGGTTGAGAACCGCTGCTGTAGAATGTCAAGAAAAATAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGAAGGTTGAGAACCGCTGCTGTAGAATGTCAAGAAAAATAGAAA  300

seq1  AGTAGAACTGGATTTATGCCTTAACATGTTTAGGTAGGCAAATATTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAACTGGATTTATGCCTTAACATGTTTAGGTAGGCAAATATTTTCT  350

seq1  GCAGATAATCAAAGCATATGTAATTAGTTCTTGGCTTTGTTTGAATTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAATCAAAGCATATGTAATTAGTTCTTGGCTTTGTTTGAATTTCT  400

seq1  AAGTTTTTAATTGTAAGTATTGAGTTGTGGGGACATAATGATGTTGCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTAATTGTAAGTATTGAGTTGTGGGGACATAATGATGTTGCCTA  450

seq1  ATGCTAGATTTGCAAAGAAAAGCTAATAGAGCCAGGACCTGTAACCCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGATTTGCAAAGAAAAGCTAATAGAGCCAGGACCTGTAACCCCAG  500

seq1  CTCCCTGGGAGGCTGGGCAGAAAGATTGCACAGCCTAAGCAACTAAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGGAGGCTGGGCAGAAAGATTGCACAGCCTAAGCAACTAAGGGA  550

seq1  GACCCTGTTTAAGGATTAAAAAAATAAAAAGGGTTAGAGATACGGTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGTTTAAGGATTAAAAAAATAAAAAGGGTTAGAGATACGGTTCAG  600

seq1  TATTACTACTTTTGCCTAGCATGCTTGTATCCCTGGATTCGATCTATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTACTTTTGCCTAGCATGCTTGTATCCCTGGATTCGATCTATATT  650

seq1  TAAAACAAAGAAGCAAAGGGGGTTTCTTTTTGGCAAGGACATTTCTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAAGAAGCAAAGGGGGTTTCTTTTTGGCAAGGACATTTCTATTT  700

seq1  TATTAGTAGTATATTTTATTATTTGAGGACTTCACATACGCACACAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTAGTATATTTTATTATTTGAGGACTTCACATACGCACACAGTAT  750

seq1  ATTTTGATATATTCACTCTTCTCCTTCCCAACTTAATGATTTCTCTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATATATTCACTCTTCTCCTTCCCAACTTAATGATTTCTCTTTTT  800

seq1  TAAACATCCTTCCTAATCCAACTGGTGCTGCTCATATGTACATGGATGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATCCTTCCTAATCCAACTGGTGCTGCTCATATGTACATGGATGTA  850

seq1  GAGCCGTCGGCTGTGCTTGGTACCACACCAGTGGCCACACTCTTCAAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGTCGGCTGTGCTTGGTACCACACCAGTGGCCACACTCTTCAAGAA  900

seq1  AGCTGACTCTCCCTCCCTCAGAAACCATCAACTTTCCATAGCTCTTCATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACTCTCCCTCCCTCAGAAACCATCAACTTTCCATAGCTCTTCATC  950

seq1  TAGAGGTGGGGTCTCATGAGCCTCTCCCCAATTTCGTGCT-AGAATATTG  999
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAGAGGTGGGGTCTCATGAGCCTCTCCCCAATTTCGTGCTAAGAATATTG  1000

seq1  ATTGGCTTGATGTTAATCAA-GCCTTGTGTAGGTACCTACAGGTGCTGTG  1048
      |||||||||||| ||||||| |||||||||| ||||||||||||||||||
seq2  ATTGGCTTGATG-TAATCAAGGCCTTGTGTA-GTACCTACAGGTGCTGTG  1048

seq1  AGTTACCATGGCACTGAGTGGTTCTGTCATGCCTAG--AAACACTGTTCT  1096
      ||||||||||||||||| ||| ||||||||||||||  ||||||||||||
seq2  AGTTACCATGGCACTGA-TGG-TCTGTCATGCCTAGGAAAACACTGTTCT  1096

seq1  TCTTCCTCTTCTAAG-ATGTCTCCTGAGCCGTGGGGAGAAGGGATATGAT  1145
      || |||||||||||| |||||||||||| |||||||||||||||||||||
seq2  TC-TCCTCTTCTAAGAATGTCTCCTGAG-CGTGGGGAGAAGGGATATGAT  1144

seq1  ATTTATGTC  1154
      |||||||||
seq2  ATTTATGTC  1153

seq1: chrX_136407911_136409052
seq2: B6Ng01-266C16.g_67_1190 (reverse)

seq1  GGGATTTCTAGATAATTCTGTGTCTGGTTCTAGGTAATTCTATGTTTAAA  50
      ||||||   |||||| || |||||||  |||||||||| |||||||||| 
seq2  GGGATTCTAAGATAA-TCCGTGTCTG--TCTAGGTAATCCTATGTTTAA-  46

seq1  TGTTTTGAGGAAGCTCCATACATTTTTTTTTCATAATGGATGTACTAATT  100
        | |||| ||||||||||||||||||||||||||   |||||||| |||
seq2  --TGTTGA-GAAGCTCCATACATTTTTTTTTCATA--TGATGTACT-ATT  90

seq1  TGCACCCGCAACAACAGTTCGTAAAGGCTTCCTTTTC-TCTACATCCACA  149
      |||| ||||||| |||| |||| ||||| |||||||| ||||||||||||
seq2  TGCA-CCGCAAC-ACAG-TCGT-AAGGC-TCCTTTTCTTCTACATCCACA  135

seq1  CCGGCAATTGTTTTCTTTCTCATTTTGTCATTTTTAACTAGAGTGAGGTG  199
      ||||||||   ||||||||||||||||||||||||||||||||||| |||
seq2  CCGGCAAT--GTTTCTTTCTCATTTTGTCATTTTTAACTAGAGTGAAGTG  183

seq1  TTGCCACATTATGATTTTCGTTTCTGCCATACTGAGCGTTTTGAGTACAC  249
       ||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  -TGCCACATTATGATTTTCG-TTCTGCCATACTGAGCGTTTTGAGTACAC  231

seq1  GTGTCTAGGATTGGGTCTTGTCCCTCCATCACCAAACTATGTCTCTCTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTAGGATTGGGTCTTGTCCCTCCATCACCAAACTATGTCTCTCTCT  281

seq1  CCAGCTCAGTTTTTATCCTTTATTTTGTGATAGATTCTCATTGAGGTTCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCAGTTTTTATCCTTTATTTTGTGATAGATTCTCATTGAGGTTCC  331

seq1  TGGACTGGCCTTGAAATTACTTTGTAGCCCAAGAAGGTTAAACATGTATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGGCCTTGAAATTACTTTGTAGCCCAAGAAGGTTAAACATGTATT  381

seq1  CATCCTTGTCAATATTCCAAGTAGCTGGAGTTAGTTACAGGCCTGCACCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTGTCAATATTCCAAGTAGCTGGAGTTAGTTACAGGCCTGCACCA  431

seq1  TCAAGCCCCAATGAGCATGTTGAAATAATGTATTGGCTTTTTGTATGTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCCCAATGAGCATGTTGAAATAATGTATTGGCTTTTTGTATGTCT  481

seq1  TTTTTTTTTTTTTTTGAGAAATTAACTTTCCCCATAAGGCTCATGAAACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTGAGAAATTAACTTTCCCCATAAGGCTCATGAAACT  531

seq1  GGGTAAGGGGTTATAAAGATGGGAAACAATTGGTGGGGAAGAAGCAATTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAGGGGTTATAAAGATGGGAAACAATTGGTGGGGAAGAAGCAATTC  581

seq1  TTTTATGGTAGAGAAATGTGTAAGTTGCCCAGGGTCTGCTGGTAATGCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGGTAGAGAAATGTGTAAGTTGCCCAGGGTCTGCTGGTAATGCAG  631

seq1  CTTTTTGTGAGTAGTAGCTCATGCTGAGGTCAGGCTTTTTGGAAAAGCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTGAGTAGTAGCTCATGCTGAGGTCAGGCTTTTTGGAAAAGCAG  681

seq1  TTGCCTGAATTGCCCATGTTCCTGTAAGTAACCCCTTACCTGTGGCCCCG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGAATTGCCCATGTTCCTGTAAGTAACCCCTTACCTGTGGCCCCG  731

seq1  CTCCACACACACACAAATATCATTGGTTCATTGAACTAAGTTTGAATGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACACACACACAAATATCATTGGTTCATTGAACTAAGTTTGAATGGA  781

seq1  GTAATTTCTTTAATTTGCCCTTGCTCTCTCTACTTGGCACAAATACAAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTCTTTAATTTGCCCTTGCTCTCTCTACTTGGCACAAATACAAAG  831

seq1  ACTCCACAAGACATGAAACACTGGGTAACATGGTACCCTTTATTGGGAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACAAGACATGAAACACTGGGTAACATGGTACCCTTTATTGGGAAA  881

seq1  TCAAGTATATATGTATGCATTTAAACATAGATACGTATATCCAATCAGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTATATATGTATGCATTTAAACATAGATACGTATATCCAATCAGCT  931

seq1  CACTGTCCACAGGGGACTGGTTTCAGAATCCCTGAGACACCGAATTTTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCCACAGGGGACTGGTTTCAGAATCCCTGAGACACCGAATTTTGT  981

seq1  AATTGCTCTAGCATCTTGTATAAAGTGGTGTAGCAATTGCATATAACCTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTCTAGCATCTTGTATAAAGTGGTGTAGCAATTGCATATAACCTA  1031

seq1  CCCTTATTCCCTCATATACTTTAAATCATCTCTAGATTACTTTTAGTGTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATTCCCTCATATACTTTAAATCATCTCTAGATTACTTTTAGTGTT  1081

seq1  TAATAAATGTAAATACTATGTAAATCAATGTTGTGCTGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATGTAAATACTATGTAAATCAATGTTGTGCTGAATTC  1124

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