BAC Information

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BAC

Clone NameB6Ng01-268G16
ChromosomeX (Build37)
Map Location 37,492,046 - 37,493,109
singlet/doubletsinglet
Overlap genenone
Upstream gene1700085A12Rik, LOC100039715, EG636756, EG636766, EG245391
Downstream geneLOC100039769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268G16.bB6Ng01-268G16.g
ACCGA071277GA071278
length1,0611,132
definitionB6Ng01-268G16.b B6Ng01-268G16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacatatgtctaaaggtccttctattgtttgaagctcatatacc
cacatttttgtgagtagtctcagtctctctctctctttctttctctctct
ctctccttccctctttcccactcttcttcagcattttctctctttttctt
tagatatgatttaactatagttgactcatgatcacacatcaacttcctga
attttcaatttcttagatcaagaaaacgatggaaactaactggaattctt
gtgttaaagattctgactacttagcctggaaaatgtaaatgtgcgtccca
acccccaattaggtatacattcctggttcaacctgctgtagccaggaagg
aaaaatcatatgacctactactccacctataaggcctctaaaagtttaat
gttgttacaggtttctatatttaaagtagcggcaagatatttcaaccctt
caacatatccacaagctcaccatactcattattctaagcagtcatcttag
tatcttcaggaatctgaagtttttctactagttcagttttttaaatttag
tacggtgctttctatggttcatattcttattatcatcatgtctatcatgt
tcattttaattttctgccttgattacattttttcaagatcattgctcttt
taattcctttggccttatctttcttctttctctgtcctattgttctttca
gaagccagagatgcattaatttttgccaagtatattttaactctcattag
gacactaatttattttaatatggtagtgagaacagagtgacattgtcaaa
gttaatagccacatcgtgtttaacaaaatttatttaaactcaaataggct
gtgttattcatgctgtttgaaagtgggaataacattaagtagctttatct
aaagtgttccattgtttcagctcagataaataactacacagttaaagaac
tacaatagttctttaactattcatttttggaattcttggtctttaactat
atcccaatttgtctgtttctctgaaagacagaatgttatggatatagtca
tgtacaatgaa

gaattccagggaaaggtagttgtcctgtattgtagtatgtttggctctat
ctccagagatatgggtgtctctagggttggctagtagaaacaataaagaa
aactcaaagggagacaactctggagatagaaaacctaggaaagaaatcaa
gaaccatagatgcaagcatcagcaacagaatacaagagatggaagagaga
atctcaggtgcagaagattccacagggaacatggacacaacaatcaaaga
aaatgcaaaatgcaaaaagatcctaactcaaaacatccaggaaatcaagg
acacaatgagaagataaaacctatggattataggagtagatgagaatgaa
gattttcaacttaaagggccagcaaatatcttcaacaaaattatagaaga
aagcttcccaacactaaagaaagagatgcctatgaacatacaagaagcct
acagaactccaaatagactggaccagaaatgaaattcctcctgacacata
gtaatcagaacaacaaatgcactaaataatgatagaatattaaaagcagt
aagggaaaaaggtcaagtaacatataaaggcaggcctatcagaattacac
aagacttttttttttttccattttttattaggtatttaactcatttacat
ttccaatgctataccaaaagtcccccatatccacccacccccactcccct
gcccacccactccccctttttggccctggtattcccctgtactggggcat
ataaagtttgcaagtccaatgggcctctctttccagtgatggccgactag
gccatcttttgatatatatgcagctagagtcaagagctccggggtactgg
ttagctcataatgttgttcccacctataggggttgcagatccctttagct
ccttgggctactttcttctagctcctccattgggaggccctattgatcca
atccaattagctgactgtgagcatccacttcttgtgttttgctggggccc
cgggcatagtctcacaggagacagctaacatctggcgttccttcaaataa
aatcttggctagtgttatgcaatgatgtcagcgatggaatgctgaattat
gggggtgtgaatccttgggctatgtggcaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_37492046_37493109
seq2: B6Ng01-268G16.b_49_1109 (reverse)

seq1  TTCATTTGTTACATGACTATATTCCATAACATTCTGTCTTTTCAGAGAAA  50
      ||||||   |||||||||||| |||||||||||||||| |||||||||||
seq2  TTCATT--GTACATGACTATA-TCCATAACATTCTGTC-TTTCAGAGAAA  46

seq1  CAGAC-AATTGGGATATAGTTAAAGACCAAGAATTCCAAAAATGAATAGT  99
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAATTGGGATATAGTTAAAGACCAAGAATTCCAAAAATGAATAGT  96

seq1  TAAAGAACTATTGTAGTTCTTTAACTGTGTAGTTATTTATCTGAGCTGAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAACTATTGTAGTTCTTTAACTGTGTAGTTATTTATCTGAGCTGAA  146

seq1  ACAATGGAACACTTTAGATAAAGCTACTTAATGTTATTCCCACTTTCAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGAACACTTTAGATAAAGCTACTTAATGTTATTCCCACTTTCAAA  196

seq1  CAGCATGAATAACACAGCCTATTTGAGTTTAAATAAATTTTGTTAAACAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGAATAACACAGCCTATTTGAGTTTAAATAAATTTTGTTAAACAC  246

seq1  GATGTGGCTATTAACTTTGACAATGTCACTCTGTTCTCACTACCATATTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGCTATTAACTTTGACAATGTCACTCTGTTCTCACTACCATATTA  296

seq1  AAATAAATTAGTGTCCTAATGAGAGTTAAAATATACTTGGCAAAAATTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATTAGTGTCCTAATGAGAGTTAAAATATACTTGGCAAAAATTAA  346

seq1  TGCATCTCTGGCTTCTGAAAGAACAATAGGACAGAGAAAGAAGAAAGATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTCTGGCTTCTGAAAGAACAATAGGACAGAGAAAGAAGAAAGATA  396

seq1  AGGCCAAAGGAATTAAAAGAGCAATGATCTTGAAAAAATGTAATCAAGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAAAGGAATTAAAAGAGCAATGATCTTGAAAAAATGTAATCAAGGC  446

seq1  AGAAAATTAAAATGAACATGATAGACATGATGATAATAAGAATATGAACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTAAAATGAACATGATAGACATGATGATAATAAGAATATGAACC  496

seq1  ATAGAAAGCACCGTACTAAATTTAAAAAACTGAACTAGTAGAAAAACTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGCACCGTACTAAATTTAAAAAACTGAACTAGTAGAAAAACTTC  546

seq1  AGATTCCTGAAGATACTAAGATGACTGCTTAGAATAATGAGTATGGTGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCTGAAGATACTAAGATGACTGCTTAGAATAATGAGTATGGTGAG  596

seq1  CTTGTGGATATGTTGAAGGGTTGAAATATCTTGCCGCTACTTTAAATATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGATATGTTGAAGGGTTGAAATATCTTGCCGCTACTTTAAATATA  646

seq1  GAAACCTGTAACAACATTAAACTTTTAGAGGCCTTATAGGTGGAGTAGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTGTAACAACATTAAACTTTTAGAGGCCTTATAGGTGGAGTAGTA  696

seq1  GGTCATATGATTTTTCCTTCCTGGCTACAGCAGGTTGAACCAGGAATGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATATGATTTTTCCTTCCTGGCTACAGCAGGTTGAACCAGGAATGTA  746

seq1  TACCTAATTGGGGGTTGGGACGCACATTTACATTTTCCAGGCTAAGTAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAATTGGGGGTTGGGACGCACATTTACATTTTCCAGGCTAAGTAGT  796

seq1  CAGAATCTTTAACACAAGAATTCCAGTTAGTTTCCATCGTTTTCTTGATC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCTTTAACACAAGAATTCCAGTTAGTTTCCATCGTTTTCTTGATC  846

seq1  TAAGAAATTGAAAATTCAGGAAGTTGATGTGTGATCATGAGTCAACTATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATTGAAAATTCAGGAAGTTGATGTGTGATCATGAGTCAACTATA  896

seq1  GTTAAATCATATCTAAAGAAAAAGAGAGAAAATGCTGAAGAAGAGTGGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATCATATCTAAAGAAAAAGAGAGAAAATGCTGAAGAAGAGTGGGA  946

seq1  AAGAGGGAAGGAGAGAGAGAGAGAAAGAAAGAGAGAGAGAGACTGAGACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAAGGAGAGAGAGAGAGAAAGAAAGAGAGAGAGAGACTGAGACT  996

seq1  ACTCACAAAAATGTGGGTATATGAGCTTCAAACAATAGAAGGACCTTTAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAAAAATGTGGGTATATGAGCTTCAAACAATAGAAGGACCTTTAG  1046

seq1  ACATATGTTGAATTC  1064
      |||||||||||||||
seq2  ACATATGTTGAATTC  1061


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