BAC Information

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BAC

Clone NameB6Ng01-271J18
ChromosomeX (Build37)
Map Location 115,104,417 - 115,104,945
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039319, LOC624284, LOC665066, EG624388
Downstream geneENSMUSG00000072994, LOC100039551, Tgifx1, LOC665087
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271J18.bB6Ng01-271J18.g
ACCGA073644GA073645
length523961
definitionB6Ng01-271J18.b B6Ng01-271J18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cagagttattccatgtttggtttgcatattgaaaaactgtattattgaac
ttaatagagtgatccagatttataatgctgtctttaaaaattgatatact
ctttcatattatccattattttagtgagtatttttgatgaccttcttatt
tgacctacttagttttgcatttccaccatcgtttttgctagtttaatctt
cttcactatttctacctccttttaaaatttatcttcatgttgtgattaac
ttccttattttatttagttgccaattttctgttgataaatactgaagtct
tcttagaattgttttacaatgtttataatcattattctgaaatttacata
tggaatttatgtagctgattctgatcatagaaaagtactataggatttgt
atgttttggaggagacaagttgtctttgtgtttcacgtaactgatatttt
gctctaggtgctgctcatttgtggtatgattatggttaatgatatttttg
ttgtttgtttgtttgttgtagtt

gaattctcacctgaggaatatggaatggcagagaagcacctgaaaaaatg
ttcaacatccgtaatcatcagggaaatgcaaattaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgttgaggatgtggagtaagagaaacactcctccattgatggtg
ggattgtaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaagatccagcagtacctcttcagggc
atatatccagatgatgccccaaccggtaattaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacacaga
tgcccctcaaaagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagttaggtaatccaatcacaa
aagaagtcaaatgatatgtactcactgataagtggatattatcccagaaa
cttaatatatcaagatataagatccaatatgctaaatgcatgaaactcca
gaagaactaagaccaaagtgtggacactttgccccttcttagaattggga
ccaaaacacccatggaaggagttacagagacaaattttggagctgtgtcg
aaaggatggaccatctagaacctgccatatccagggtttcatcccataat
gagcttctaaacactgacaccattgcacacactagcctgattttgctata
acgacccagatatagctgtatcttgtgagactatgcccgggccctagcaa
acacaaaagtggatgctcacagtcagctattgggaaggatcaaaaggccc
ccaatggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_115104417_115104945
seq2: B6Ng01-271J18.b_47_575 (reverse)

seq1  AACTACAACAAACAAACAAACAACAAAAATATCATTAACCATAATCATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAACAAACAAACAAACAACAAAAATATCATTAACCATAATCATAC  50

seq1  CACAAATGAGCAGCACCTAGAGCAAAATATCAGTTACGTGAAACACAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGAGCAGCACCTAGAGCAAAATATCAGTTACGTGAAACACAAAG  100

seq1  ACAACTTGTCTCCTCCAAAACATACAAATCCTATAGTACTTTTCTATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGTCTCCTCCAAAACATACAAATCCTATAGTACTTTTCTATGAT  150

seq1  CAGAATCAGCTACATAAATTCCATATGTAAATTTCAGAATAATGATTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCAGCTACATAAATTCCATATGTAAATTTCAGAATAATGATTATA  200

seq1  AACATTGTAAAACAATTCTAAGAAGACTTCAGTATTTATCAACAGAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGTAAAACAATTCTAAGAAGACTTCAGTATTTATCAACAGAAAAT  250

seq1  TGGCAACTAAATAAAATAAGGAAGTTAATCACAACATGAAGATAAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAACTAAATAAAATAAGGAAGTTAATCACAACATGAAGATAAATTTT  300

seq1  AAAAGGAGGTAGAAATAGTGAAGAAGATTAAACTAGCAAAAACGATGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGGTAGAAATAGTGAAGAAGATTAAACTAGCAAAAACGATGGTG  350

seq1  GAAATGCAAAACTAAGTAGGTCAAATAAGAAGGTCATCAAAAATACTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCAAAACTAAGTAGGTCAAATAAGAAGGTCATCAAAAATACTCAC  400

seq1  TAAAATAATGGATAATATGAAAGAGTATATCAATTTTTAAAGACAGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAATGGATAATATGAAAGAGTATATCAATTTTTAAAGACAGCATT  450

seq1  ATAAATCTGGATCACTCTATTAAGTTCAATAATACAGTTTTTCAATATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTGGATCACTCTATTAAGTTCAATAATACAGTTTTTCAATATGC  500

seq1  AAACCAAACATGGAATAACTCTGGAATTC  529
      |||||||||||||||||||||||||||||
seq2  AAACCAAACATGGAATAACTCTGGAATTC  529


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