BAC Information

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BAC

Clone NameB6Ng01-272F18
ChromosomeX (Build37)
Map Location 44,424,122 - 44,425,275
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040075, Actrt1, EG245405, LOC665632
Downstream geneEG434775, LOC236775, LOC100040133, LOC100040145, EG624187, Smarca1, LOC676253, Ocrl, LOC270596, LOC665672, Apln
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272F18.bB6Ng01-272F18.g
ACCGA074207GA074208
length1,144450
definitionB6Ng01-272F18.b B6Ng01-272F18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtattcaatattcagaaccataaaaatgaccaaatggaactt
agaaatcaatccaaaagaaagcaaaggtgaaggaaataaacagagaaaat
gagataaatgcaattcttaacaataatggcaaaattttacccaagttgat
caataattaccataaatgtaaaaaagcataatctacataatgcaataaaa
taaagcttaaggttgcaaataattgtaacagggtttcaacttggaaattt
actatctttgaactaagtgtctctctagtttgttgcttgccaactcactt
ccttgtatggctaatgagctccagaagtctgccccccatggtgagagaga
agggagatctttccctacctaaaatgaccacctgaggttcaagatgggac
aatggaggtttctattttggcagttgctaataattgtgtgatttctttgc
caattgtcacatacatctctgcacattaatcctattaactctcccttttc
tttctcacattgaaaaggtcctgttgctatgttcttcccatagacttagg
tgtgctcacactctgtcttattttgaaaacttgggaaccagtccagatgg
taaaacattaatacacgtcttaactgcagagaacaaaacctcatcggatt
caagaacaagtaatgccccagtgacagaaaatatcacagccaccaaattc
ataataaaataaataaaatgcaatgaatcacattgtgcaaggataaaatt
tcatcagggaaagcatttttatctctttttgttctaacacatcatccagg
aaattctgaaagatatctttgtttgtttctgtatagcttatattaaaaaa
aagattgtgaaaatgttatatttagatcagtatattattactcattttaa
tgttgaattttatttggacttgttaaactataaacaattgtaattaatta
ttttatgtgatatttagtaaattgtgaacccatagttcctatattctagg
tttgtttgttgttttgatcagtgtgtgcaactcatggatgctagacttca
ttcaacctaagatactattgactatgcccaacaaaaaactggtatttatt
aaatattagggtagttttgcctatttttttttacttctaaggtg
tgtatcccttttaagcatgagctgctttattggtgagaatatgggtgaca
gaaacaccctgaaagaaggctgttagctatctatccatatgtgaaatgta
tatttactcattttaaagaagaggatgtgtcacttaagaaaggtggaggt
ttagtaaagtaatggttataggtgctgctcaaccctgcacagagaattac
aggcaactggaaaatgctgagactaggagaaaaagtcttctccagggaag
agaacaccaatttgttattcaatactaaatggtcagcccaaacactatac
atatgagtaacatacagactgagcaggttctgtttaagattgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgcatgtaccaa
catttaatgaaaataaattagccgggaatttgtaacatagtcaggatagg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_44424122_44425275
seq2: B6Ng01-272F18.b_46_1189

seq1  GAATTCATGTATTCAATATTCAGAACCATAAAAATGACCAAATGGAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTATTCAATATTCAGAACCATAAAAATGACCAAATGGAACTT  50

seq1  AGAAATCAATCCAAAAGAAAGCAAAGGTGAAGGAAATAAACAGAGAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCAATCCAAAAGAAAGCAAAGGTGAAGGAAATAAACAGAGAAAAT  100

seq1  GAGATAAATGCAATTCTTAACAATAATGGCAAAATTTTACCCAAGTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAATGCAATTCTTAACAATAATGGCAAAATTTTACCCAAGTTGAT  150

seq1  CAATAATTACCATAAATGTAAAAAAGCATAATCTACATAATGCAATAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATTACCATAAATGTAAAAAAGCATAATCTACATAATGCAATAAAA  200

seq1  TAAAGCTTAAGGTTGCAAATAATTGTAACAGGGTTTCAACTTGGAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTAAGGTTGCAAATAATTGTAACAGGGTTTCAACTTGGAAATTT  250

seq1  ACTATCTTTGAACTAAGTGTCTCTCTAGTTTGTTGCTTGCCAACTCACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTTTGAACTAAGTGTCTCTCTAGTTTGTTGCTTGCCAACTCACTT  300

seq1  CCTTGTATGGCTAATGAGCTCCAGAAGTCTGCCCCCCATGGTGAGAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTATGGCTAATGAGCTCCAGAAGTCTGCCCCCCATGGTGAGAGAGA  350

seq1  AGGGAGATCTTTCCCTACCTAAAATGACCACCTGAGGTTCAAGATGGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGATCTTTCCCTACCTAAAATGACCACCTGAGGTTCAAGATGGGAC  400

seq1  AATGGAGGTTTCTATTTTGGCAGTTGCTAATAATTGTGTGATTTCTTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGTTTCTATTTTGGCAGTTGCTAATAATTGTGTGATTTCTTTGC  450

seq1  CAATTGTCACATACATCTCTGCACATTAATCCTATTAACTCTCCCTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTCACATACATCTCTGCACATTAATCCTATTAACTCTCCCTTTTC  500

seq1  TTTCTCACATTGAAAAGGTCCTGTTGCTATGTTCTTCCCATAGACTTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACATTGAAAAGGTCCTGTTGCTATGTTCTTCCCATAGACTTAGG  550

seq1  TGTGCTCACACTCTGTCTTATTTTGAAAACTTGGGAACCAGTCCAGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCACACTCTGTCTTATTTTGAAAACTTGGGAACCAGTCCAGATGG  600

seq1  TAAAACATTAATACACGTCTTAACTGCAGAGAACAAAACCTCATCGGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATTAATACACGTCTTAACTGCAGAGAACAAAACCTCATCGGATT  650

seq1  CAAGAACAAGTAATGCCCCAGTGACAGAAAATATCACAGCCACCAAATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACAAGTAATGCCCCAGTGACAGAAAATATCACAGCCACCAAATTC  700

seq1  ATAATAAAATAAATAAAATGCAATGAATCACATTGTGCAAGGATAAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAAATAAATAAAATGCAATGAATCACATTGTGCAAGGATAAAATT  750

seq1  TCATCAGGGAAAGCATTTTTATCTCTTTTTGTTCTAACACATCATCCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGGGAAAGCATTTTTATCTCTTTTTGTTCTAACACATCATCCAGG  800

seq1  AAATTCTGAAAGATATCTTTGTTTGTTTCTGTATAGCTTATATTAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTGAAAGATATCTTTGTTTGTTTCTGTATAGCTTATATTAAAAAA  850

seq1  AAGATTGTGAAAATGTTATATTTAGATCAGTATATTATTACTCATTTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGTGAAAATGTTATATTTAGATCAGTATATTATTACTCATTTTAA  900

seq1  TGTTGAATTTTATTTGGACTTGTTAAACTATAAACAATTGTAATTAATTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAATTTTATTTGGACTTGTTAAACTATAAACAATTGTAATTAATTA  950

seq1  TTTTATGTGATATTTAGTAAATTGTGAACCCATAGTTCCTATATTCTAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTGATATTTAGTAAATTGTGAACCCATAGTTCCTATATTCTAGG  1000

seq1  TTTTGTTTGTTTGTTTTGATCAGGTGTGTGCAACTCATGGATGCTAGACT  1050
       |||||||| |||||||||||| |||||||||||||||||||||||||||
seq2  -TTTGTTTG-TTGTTTTGATCA-GTGTGTGCAACTCATGGATGCTAGACT  1047

seq1  TCATTCAACCTAAGATAACTA-TGACTATGGCCCAACAAAAAACTGGTAA  1099
      |||||||||||||||| |||| ||||||| ||||||||||||||||||| 
seq2  TCATTCAACCTAAGAT-ACTATTGACTAT-GCCCAACAAAAAACTGGTA-  1094

seq1  TTTTATTTAAAATATTAAGGGGTAGTTTTGCTATTTTTTTTTTACTTCTA  1149
       ||||||  ||||||||  ||||||||||||   ||||||||||||||||
seq2  -TTTATT--AAATATTA--GGGTAGTTTTGCCTATTTTTTTTTACTTCTA  1139

seq1  AGGTG  1154
      |||||
seq2  AGGTG  1144