BAC Information

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BAC

Clone NameB6Ng01-274I09
ChromosomeX (Build37)
Map Location 96,283,835 - 96,362,050
singlet/doubletdoublet
Overlap geneEfnb1
Upstream geneAr, LOC100042324, Ophn1, Yipf6, LOC100042932, Stard8, LOC436219
Downstream genePja1, LOC100042947, Pcna-ps1, EG620592, Eda
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274I09.bB6Ng01-274I09.g
ACCGA075802GA075803
length989473
definitionB6Ng01-274I09.b B6Ng01-274I09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,361,521 - 96,362,050)(96,283,835 - 96,284,321)
sequence
catataaagacttgtaggagacttgaggaatgaagatttggaccctagct
agtggtgttgttttggtaggttctaaaaatgtaaggaggtgaagacacac
tgatggaattaggtcaccaggggtgagtccttccacatattttgttcttg
atgccctcctgtctgtttcctgtcttctgtgaggtacagagcaattgcat
catgaccttctgcctcttcatgtacccagagtccacagagctgaggacta
aggactgtcctctctaaaaccatgagccacattaagccctccctctctta
gtaggatgtttttggtcaggtattttgtcacaccaacaacagtcaaacag
atacacacagtcctgggaatcagggaaagagagacaaatctagagtgctg
gcatcatgggcacgtacctctgccactcatactgtattctgcccttacaa
atgtttgaagatcaccaaaagttcatgtgttgagaatgacatcctccatt
caacagtgaagggagatggaccctaataagaaggtcatttgcacttggtc
ctcatggctggatttgtgccatcatcacaggagtaggtgtgtctacatca
gcttgttataaaagtgagcttggcgtcctctcactctctcattcctgccc
tttcttgcccttctgcctttaccaggagatgacagagtgtgcaagccctc
tccagacgcctgcaccctgctttaatacttcccagacattccgaatcaca
cagtaattaatttctgtccacttaccatcacccagtgttaagtgctctgc
tatagcagcagaaaacaggccaagatcacccttcagagtgcaatgaggtg
attccgaggctggcctgcaagagcctggccttaacagtctccactctttg
aatatgtggaaaacctcacagaagtacctgactgtctctgggtcttagca
tcctcggtgaaacctggcagcactgggatgagaccagtc

ttcacagacgtgcaatgatcacatggaggctttggttaagatgtccggat
aaatgtcctgatagagttgtaaaagacaaatgggaaccaatctgcctgag
gatatctctgtctgtctgtctgtctctctctctctctctctctctctctc
tctctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtcactctctctctcttggaaacttacttatctgaagaa
ttgccttcagctatgtggcggtggtaattttcacaagtggcaggcaggat
gcctgggagttaccctctcattgtgcagtcctgtgagctcggagagctat
gactctcccactctggttgcaaaatggagacatatatatgggagctcacc
cagtgtctcatactgccagtgcagatcaatacaaggtatctctgtgagag
cgtgcgccctgcatagtgatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_96361521_96362050
seq2: B6Ng01-274I09.b_48_577 (reverse)

seq1  CTTATTAGGGTCCATCTCCCTTCACTGTTGAATGGAGGATGTCATTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAGGGTCCATCTCCCTTCACTGTTGAATGGAGGATGTCATTCTCA  50

seq1  ACACATGAACTTTTGGTGATCTTCAAACATTTGTAAGGGCAGAATACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGAACTTTTGGTGATCTTCAAACATTTGTAAGGGCAGAATACAGT  100

seq1  ATGAGTGGCAGAGGTACGTGCCCATGATGCCAGCACTCTAGATTTGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGGCAGAGGTACGTGCCCATGATGCCAGCACTCTAGATTTGTCTC  150

seq1  TCTTTCCCTGATTCCCAGGACTGTGTGTATCTGTTTGACTGTTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCCTGATTCCCAGGACTGTGTGTATCTGTTTGACTGTTGTTGGTG  200

seq1  TGACAAAATACCTGACCAAAAACATCCTACTAAGAGAGGGAGGGCTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAATACCTGACCAAAAACATCCTACTAAGAGAGGGAGGGCTTAAT  250

seq1  GTGGCTCATGGTTTTAGAGAGGACAGTCCTTAGTCCTCAGCTCTGTGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCATGGTTTTAGAGAGGACAGTCCTTAGTCCTCAGCTCTGTGGAC  300

seq1  TCTGGGTACATGAAGAGGCAGAAGGTCATGATGCAATTGCTCTGTACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTACATGAAGAGGCAGAAGGTCATGATGCAATTGCTCTGTACCTC  350

seq1  ACAGAAGACAGGAAACAGACAGGAGGGCATCAAGAACAAAATATGTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGACAGGAAACAGACAGGAGGGCATCAAGAACAAAATATGTGGAA  400

seq1  GGACTCACCCCTGGTGACCTAATTCCATCAGTGTGTCTTCACCTCCTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCACCCCTGGTGACCTAATTCCATCAGTGTGTCTTCACCTCCTTAC  450

seq1  ATTTTTAGAACCTACCAAAACAACACCACTAGCTAGGGTCCAAATCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAGAACCTACCAAAACAACACCACTAGCTAGGGTCCAAATCTTCA  500

seq1  TTCCTCAAGTCTCCTACAAGTCTTTATATG  530
      ||||||||||||||||||||||||||||||
seq2  TTCCTCAAGTCTCCTACAAGTCTTTATATG  530


seq1: chrX_96283835_96284321
seq2: B6Ng01-274I09.g_64_542

seq1  GAATTCTTCACAGACGTGCAATGATCACATGGAGGCTTTGGTTAAGATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACAGACGTGCAATGATCACATGGAGGCTTTGGTTAAGATGT  50

seq1  CCGGATAAATGTCCTGATAGAGTTGTAAAAGACAAATGGGAACCAATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGATAAATGTCCTGATAGAGTTGTAAAAGACAAATGGGAACCAATCTG  100

seq1  CCTGAGGATATCTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGATATCTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTCTC  150

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTCTATCTCTGTCTCTG  200
      ||||||||||||||||||||||||| | | ||||| | | | ||| | ||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTG  200

seq1  TCTCTCTGTCTCTCTCTCTCTCCTTTCTCCATTTTGGAAACTTACTAATC  250
      | | | ||| | | | | ||  || ||||  | ||||||||||||| |||
seq2  TGTGTGTGTGTGTGTGTGTC-ACTCTCTCTCTCTTGGAAACTTACTTATC  249

seq1  TGATGAATTGCCTTCAGCTATGTGGCACTGGTAATTTTCAGTAGTGGCAG  300
      ||| ||||||||||||||||||||||  ||||||||||||  ||||||||
seq2  TGAAGAATTGCCTTCAGCTATGTGGCGGTGGTAATTTTCACAAGTGGCAG  299

seq1  GGAGGATGCCTGGGAGTTACCCTCTCTTTGTGCAGTCCTGTGACCTCAAA  350
      | |||||||||||||||||||||||| |||||||||||||||| |||  |
seq2  GCAGGATGCCTGGGAGTTACCCTCTCATTGTGCAGTCCTGTGAGCTCGGA  349

seq1  GAGCTATGACTTTCCCACTCTGGTTGCAAAACTGGGGACATATTCATGGT  400
      ||||||||||| ||||||||||||||||||| ||| |||||||  |||| 
seq2  GAGCTATGACTCTCCCACTCTGGTTGCAAAA-TGGAGACATATATATGGG  398

seq1  AGCTCCATCCAGTGCCTCAGAACTGCCCCTGCAGGTTTCAAATAGTAAGG  450
      |||| || |||||| ||||  ||||||  ||||| |    ||||  ||||
seq2  AGCT-CACCCAGTGTCTCA-TACTGCCAGTGCAGAT---CAATA-CAAGG  442

seq1  TAGTTCCGTGAGAACCTGGGCCCTGCATAGTCATGGA  487
      ||  || |||||| | || |||||||||||| |||||
seq2  TATCTCTGTGAGAGCGTGCGCCCTGCATAGTGATGGA  479


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