BAC Information

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BAC

Clone NameB6Ng01-276G21
ChromosomeX (Build37)
Map Location 87,407,075 - 87,408,096
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667934, Pet2, EG629419, 4932429P05Rik, LOC633246, Nanog-ps1, 4930415L06Rik, EG547215
Downstream geneGm370, LOC194615, LOC629471, LOC100041815, Gm44, LOC670074
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276G21.g
ACCGA077214
length1,058
definitionB6Ng01-276G21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagttacttcccactcatacctgttgtgatgtaaccaaaaacca
tttggggacattatcaactcattaaagtgagagatgtaatagaaagaaca
catgcaatgaggaacaaatataaaagtgttaaccactgaaagcgaaaaaa
atcaatctggattatttctcatggtaaaagtgggttaaatttcaagcatg
acagctgattaatctaaaaaagtagaaggaaaagttcatttaatcattgg
caatatcaattgagcatctactacatataatacatagttttaacttaaga
aaaatgtattagagaataaaagtagtcatttcatttaaggatgcttatct
tctaaaatgaatctaatagagggactagaattaagcaaaactctatgaca
aagcatttaaatataaaattaataacttctgaattatgaaatgaaagtaa
gttctatttaattgaagagccaaaataatttttcagaagaaaactctttg
gggtttgaaagaaccagccaaatatttagggtattatttagtaccattat
ggacttttttattacttttattttcaacagcctactctcaccaagggaca
gaatctaaacagagacacagcgaaactaatagaggctatgaaccaaatgg
atttaatagatatctatagaaaaattcaccctaaaacaaaagaatatacc
ttcttctcagcacctcatggtaccttctccaaaattgcccatattatcag
tcacaaaacaagcctcaaaagatacaaggaatttgaaaaaatcccatgca
tcctatcagaacaccatggattaaggtggtcttcaacaataacaaaaaca
acagaaaacccaccccttggaaactgaacaactctttaataaatgataat
ttggtcagagaagaaagaagaaaaaattaagactttctgaaatcaatgaa
attatgacacagcatatgcagtcttatgggacacatgaaagcagtgctaa
aacaaaaaattcactgcactatgttcctggtaagaaattagaaagatcta
cactagca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_87407075_87408096
seq2: B6Ng01-276G21.g_112_1123 (reverse)

seq1  TGCTAGTGTAGGATCTTTCTAATTTCTTTACCAGGGAACATAGTGCAGTG  50
      |||||||||| ||||||||||||||| |||||| ||||||||||||||||
seq2  TGCTAGTGTA-GATCTTTCTAATTTC-TTACCA-GGAACATAGTGCAGTG  47

seq1  AA-TTTTTGTTTTAGCACTGCTTTCATTGTGTCCCATAAGACTGCATATG  99
      || ||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AATTTTTTGTTTTAGCACTGCTTTCA-TGTGTCCCATAAGACTGCATATG  96

seq1  CTGTGTCATAATTTTCATTGATTTTCAGAAAGTCTTTAATTTTTTTCTTT  149
      ||||||||||| ||||||||| ||||||||||||||  | ||||||||| 
seq2  CTGTGTCATAA-TTTCATTGA-TTTCAGAAAGTCTT--AATTTTTTCTT-  141

seq1  CTTTTCTTCTCTGACCAAATTATCATTTATTAAAGAGTTGTTCAGTTTCC  199
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTTTCTTCTCTGACCAAATTATCATTTATTAAAGAGTTGTTCAGTTTCC  190

seq1  AAGGGGTGGGTTTTCTGTTGTTTTTGTTATTGTTGAAGACCAACCTTAAT  249
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAGGGGTGGGTTTTCTGTTGTTTTTGTTATTGTTGAAGACC-ACCTTAAT  239

seq1  CCATGGTGTTCTGATAGGATGCATGGGATTTTTTCAAATTCCTTGTATCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTGTTCTGATAGGATGCATGGGATTTTTTCAAATTCCTTGTATCT  289

seq1  TTTGAGGCTTGTTTTGTGACTGATAATATGGGCAATTTTGGAGAAGGTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGCTTGTTTTGTGACTGATAATATGGGCAATTTTGGAGAAGGTAC  339

seq1  CATGAGGTGCTGAGAAGAAGGTATATTCTTTTGTTTTAGGGTGAATTTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGTGCTGAGAAGAAGGTATATTCTTTTGTTTTAGGGTGAATTTTT  389

seq1  CTATAGATATCTATTAAATCCATTTGGTTCATAGCCTCTATTAGTTTCGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGATATCTATTAAATCCATTTGGTTCATAGCCTCTATTAGTTTCGC  439

seq1  TGTGTCTCTGTTTAGATTCTGTCCCTTGGTGAGAGTAGGCTGTTGAAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTCTGTTTAGATTCTGTCCCTTGGTGAGAGTAGGCTGTTGAAAAT  489

seq1  AAAAGTAATAAAAAAGTCCATAATGGTACTAAATAATACCCTAAATATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAATAAAAAAGTCCATAATGGTACTAAATAATACCCTAAATATTT  539

seq1  GGCTGGTTCTTTCAAACCCCAAAGAGTTTTCTTCTGAAAAATTATTTTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTTCTTTCAAACCCCAAAGAGTTTTCTTCTGAAAAATTATTTTGG  589

seq1  CTCTTCAATTAAATAGAACTTACTTTCATTTCATAATTCAGAAGTTATTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAATTAAATAGAACTTACTTTCATTTCATAATTCAGAAGTTATTA  639

seq1  ATTTTATATTTAAATGCTTTGTCATAGAGTTTTGCTTAATTCTAGTCCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATATTTAAATGCTTTGTCATAGAGTTTTGCTTAATTCTAGTCCCT  689

seq1  CTATTAGATTCATTTTAGAAGATAAGCATCCTTAAATGAAATGACTACTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAGATTCATTTTAGAAGATAAGCATCCTTAAATGAAATGACTACTT  739

seq1  TTATTCTCTAATACATTTTTCTTAAGTTAAAACTATGTATTATATGTAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTCTAATACATTTTTCTTAAGTTAAAACTATGTATTATATGTAGT  789

seq1  AGATGCTCAATTGATATTGCCAATGATTAAATGAACTTTTCCTTCTACTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTCAATTGATATTGCCAATGATTAAATGAACTTTTCCTTCTACTT  839

seq1  TTTTAGATTAATCAGCTGTCATGCTTGAAATTTAACCCACTTTTACCATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGATTAATCAGCTGTCATGCTTGAAATTTAACCCACTTTTACCATG  889

seq1  AGAAATAATCCAGATTGATTTTTTTCGCTTTCAGTGGTTAACACTTTTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAATCCAGATTGATTTTTTTCGCTTTCAGTGGTTAACACTTTTAT  939

seq1  ATTTGTTCCTCATTGCATGTGTTCTTTCTATTACATCTCTCACTTTAATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCCTCATTGCATGTGTTCTTTCTATTACATCTCTCACTTTAATG  989

seq1  AGTTGATAATGTCACCAAATGGT  1022
      ||||||||||||| |||||||||
seq2  AGTTGATAATGTCCCCAAATGGT  1012